RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TSTD3H0UI37 97 aa10.45□□□□□ -0.74
CDK5RAP3-228ENST00000583363 PTTG1IPP53801 180 aa10.45□□□□□ -0.74
CDK5RAP3-228ENST00000583363 Q6ZVH6 145 aa10.45□□□□□ -0.74
CDK5RAP3-228ENST00000583363 A0A096LNI7 61 aa10.44□□□□□ -0.74
CDK5RAP3-228ENST00000583363 LOC107984156A0A0G2JMH3 177 aa10.43□□□□□ -0.74
CDK5RAP3-228ENST00000583363 SRSF9Q13242 221 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDK5RAP3-228ENST00000583363 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-228ENST00000583363 ARL17AQ8IVW1 177 aa10.43□□□□□ -0.74
CDK5RAP3-228ENST00000583363 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
CDK5RAP3-228ENST00000583363 EIF4EBP3O60516 100 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-228ENST00000583363 IFITM1P13164 125 aa10.42□□□□□ -0.74
CDK5RAP3-228ENST00000583363 KRTAP10-1P60331 282 aa10.42□□□□□ -0.74
CDK5RAP3-228ENST00000583363 SOSTDC1Q6X4U4 206 aa10.42□□□□□ -0.74
CDK5RAP3-228ENST00000583363 LINC00308Q8TCZ7 52 aa10.42□□□□□ -0.74
CDK5RAP3-228ENST00000583363 IGKV2-24A0A0C4DH68 120 aa10.41□□□□□ -0.74
CDK5RAP3-228ENST00000583363 CHTF8P0CG12 524 aa10.41□□□□□ -0.74
CDK5RAP3-228ENST00000583363 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
CDK5RAP3-228ENST00000583363 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
CDK5RAP3-228ENST00000583363 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
CDK5RAP3-228ENST00000583363 LINC00474Q9P2X8 69 aa10.41□□□□□ -0.74
CDK5RAP3-228ENST00000583363 PANO1I0J062 215 aa10.4□□□□□ -0.74
CDK5RAP3-228ENST00000583363 NPC2P61916 151 aa10.4□□□□□ -0.74
CDK5RAP3-228ENST00000583363 TAL2Q16559 108 aa10.4□□□□□ -0.74
CDK5RAP3-228ENST00000583363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-228ENST00000583363 HERC1Q15751 4861 aa10.39□□□□□ -0.75
CDK5RAP3-228ENST00000583363 PPDPFQ9H3Y8 114 aa10.39□□□□□ -0.75
CDK5RAP3-228ENST00000583363 Q8N1X5 172 aa10.38□□□□□ -0.75
CDK5RAP3-228ENST00000583363 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
CDK5RAP3-228ENST00000583363 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
CDK5RAP3-228ENST00000583363 PLA2G2DQ9UNK4 145 aa10.38□□□□□ -0.75
CDK5RAP3-228ENST00000583363 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
CDK5RAP3-228ENST00000583363 FAM30AQ9NZY2 134 aa10.37□□□□□ -0.75
CDK5RAP3-228ENST00000583363 A0A1W2PNN7 141 aa10.36□□□□□ -0.75
CDK5RAP3-228ENST00000583363 FAM168BA1KXE4 195 aa10.36□□□□□ -0.75
CDK5RAP3-228ENST00000583363 CTAG1AP78358 180 aa10.36□□□□□ -0.75
CDK5RAP3-228ENST00000583363 HSD52Q0P140 79 aa10.36□□□□□ -0.75
CDK5RAP3-228ENST00000583363 Q6ZSA8 131 aa10.36□□□□□ -0.75
CDK5RAP3-228ENST00000583363 Q8NDZ9 215 aa10.36□□□□□ -0.75
CDK5RAP3-228ENST00000583363 DDTP30046 118 aa10.35□□□□□ -0.75
CDK5RAP3-228ENST00000583363 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
CDK5RAP3-228ENST00000583363 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
CDK5RAP3-228ENST00000583363 CEND1Q8N111 149 aa10.35□□□□□ -0.75
CDK5RAP3-228ENST00000583363 EPM2AB3EWF7 344 aa10.34□□□□□ -0.75
CDK5RAP3-228ENST00000583363 NDUFC2O95298 119 aa10.34□□□□□ -0.75
CDK5RAP3-228ENST00000583363 VPREB1P12018 145 aa10.34□□□□□ -0.75
CDK5RAP3-228ENST00000583363 RPL24P83731 157 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-228ENST00000583363 A0A087WYN8 130 aa10.33□□□□□ -0.76
CDK5RAP3-228ENST00000583363 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-228ENST00000583363 IGLV5-37A0A075B6J1 123 aa10.32□□□□□ -0.76
CDK5RAP3-228ENST00000583363 A4D1N5 150 aa10.32□□□□□ -0.76
CDK5RAP3-228ENST00000583363 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-228ENST00000583363 PLAC8Q9NZF1 115 aa10.31□□□□□ -0.76
CDK5RAP3-228ENST00000583363 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
CDK5RAP3-228ENST00000583363 PCP4L1A6NKN8 68 aa10.3□□□□□ -0.76
CDK5RAP3-228ENST00000583363 IGKV2-28A0A075B6P5 120 aa10.29□□□□□ -0.76
CDK5RAP3-228ENST00000583363 IGKV2D-28P01615 120 aa10.29□□□□□ -0.76
CDK5RAP3-228ENST00000583363 FXYD2P54710 66 aa10.29□□□□□ -0.76
CDK5RAP3-228ENST00000583363 BVES-AS1Q5T3Y7 98 aa10.29□□□□□ -0.76
CDK5RAP3-228ENST00000583363 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
CDK5RAP3-228ENST00000583363 M0R378 163 aa10.28□□□□□ -0.76
CDK5RAP3-228ENST00000583363 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
CDK5RAP3-228ENST00000583363 CIRBP-AS1Q8TBR5 109 aa10.28□□□□□ -0.76
CDK5RAP3-228ENST00000583363 NCR3O14931 201 aa10.27□□□□□ -0.77
CDK5RAP3-228ENST00000583363 HINT1P49773 126 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-228ENST00000583363 FAT1Q14517 4588 aa10.26□□□□□ -0.77
CDK5RAP3-228ENST00000583363 TMEM238LA0A1B0GVL6 79 aa10.26□□□□□ -0.77
CDK5RAP3-228ENST00000583363 A6NJY4 79 aa10.26□□□□□ -0.77
CDK5RAP3-228ENST00000583363 CFC1BP0CG36 223 aa10.26□□□□□ -0.77
CDK5RAP3-228ENST00000583363 CFC1P0CG37 223 aa10.26□□□□□ -0.77
CDK5RAP3-228ENST00000583363 SCXQ7RTU7 201 aa10.26□□□□□ -0.77
CDK5RAP3-228ENST00000583363 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
CDK5RAP3-228ENST00000583363 M0QXV9 152 aa10.25□□□□□ -0.77
CDK5RAP3-228ENST00000583363 M0R143 59 aa10.25□□□□□ -0.77
CDK5RAP3-228ENST00000583363 XGP55808 180 aa10.25□□□□□ -0.77
CDK5RAP3-228ENST00000583363 LBHQ53QV2 105 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-228ENST00000583363 PHF5AQ7RTV0 110 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-228ENST00000583363 MRPL55Q7Z7F7 128 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-228ENST00000583363 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
CDK5RAP3-228ENST00000583363 LINC00337Q8N6G1 96 aa10.24□□□□□ -0.77
CDK5RAP3-228ENST00000583363 TRAV13-2A0A0B4J235 113 aa10.23□□□□□ -0.77
CDK5RAP3-228ENST00000583363 HAMPP81172 84 aa10.23□□□□□ -0.77
CDK5RAP3-228ENST00000583363 A0A0B4J2C4 111 aa10.22□□□□□ -0.77
CDK5RAP3-228ENST00000583363 GAGE10A6NGK3 116 aa10.22□□□□□ -0.77
CDK5RAP3-228ENST00000583363 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-228ENST00000583363 A0A1B0GWB2 263 aa10.21□□□□□ -0.77
CDK5RAP3-228ENST00000583363 IGLV6-57P01721 117 aa10.21□□□□□ -0.77
CDK5RAP3-228ENST00000583363 S100A7L2Q5SY68 101 aa10.21□□□□□ -0.77
CDK5RAP3-228ENST00000583363 OR13C6PQ8NH95 151 aa10.21□□□□□ -0.77
CDK5RAP3-228ENST00000583363 TMEM126AQ9H061 195 aa10.21□□□□□ -0.77
CDK5RAP3-228ENST00000583363 NHP2Q9NX24 153 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-228ENST00000583363 IGLV1-50A0A075B6I6 118 aa10.2□□□□□ -0.78
CDK5RAP3-228ENST00000583363 TRBV10-3A0A0K0K1G6 114 aa10.2□□□□□ -0.78
CDK5RAP3-228ENST00000583363 A6NDN8 102 aa10.2□□□□□ -0.78
CDK5RAP3-228ENST00000583363 RPL37AP8A6NKH3 93 aa10.2□□□□□ -0.78
CDK5RAP3-228ENST00000583363 RAB37Q96AX2 223 aa10.2□□□□□ -0.78
CDK5RAP3-228ENST00000583363 KRTAP11-1Q8IUC1 163 aa10.19□□□□□ -0.78
CDK5RAP3-228ENST00000583363 INAFM2P0DMQ5 153 aa10.18□□□□□ -0.78
CDK5RAP3-228ENST00000583363 PRO1854Q9UHT4 67 aa10.18□□□□□ -0.78
CDK5RAP3-228ENST00000583363 UBE2BP63146 152 aa10.17□□□□□ -0.78
CDK5RAP3-228ENST00000583363 BATFQ16520 125 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms