RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 LINC00158P58513 81 aa13.4□□□□□ -0.26
TSEN54-208ENST00000583173 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
TSEN54-208ENST00000583173 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
TSEN54-208ENST00000583173 TP73-AS1Q9UF72 201 aa13.39□□□□□ -0.27
TSEN54-208ENST00000583173 M0QXV9 152 aa13.38□□□□□ -0.27
TSEN54-208ENST00000583173 AKR1D1P51857 326 aa13.38□□□□□ -0.27
TSEN54-208ENST00000583173 PRR3P79522 188 aaKnown RBP13.38□□□□□ -0.27
TSEN54-208ENST00000583173 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
TSEN54-208ENST00000583173 Q8NDZ9 215 aa13.37□□□□□ -0.27
TSEN54-208ENST00000583173 PSORS1C2Q9UIG4 136 aa13.37□□□□□ -0.27
TSEN54-208ENST00000583173 ANKRD39Q53RE8 183 aa13.36□□□□□ -0.27
TSEN54-208ENST00000583173 ATOH7Q8N100 152 aa13.36□□□□□ -0.27
TSEN54-208ENST00000583173 VPREB1P12018 145 aa13.35□□□□□ -0.27
TSEN54-208ENST00000583173 MEIG1Q5JSS6 88 aa13.35□□□□□ -0.27
TSEN54-208ENST00000583173 MIR7-3HGQ8N6C7 128 aa13.35□□□□□ -0.27
TSEN54-208ENST00000583173 LOC107984156A0A0G2JMH3 177 aa13.34□□□□□ -0.27
TSEN54-208ENST00000583173 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
TSEN54-208ENST00000583173 ARL17AQ8IVW1 177 aa13.34□□□□□ -0.27
TSEN54-208ENST00000583173 FLG2Q5D862 2391 aaPredicted RBP13.34□□□□□ -0.27
TSEN54-208ENST00000583173 MYCBP2O75592 4640 aa13.33□□□□□ -0.27
TSEN54-208ENST00000583173 SRSF9Q13242 221 aaKnown RBP eCLIP13.33□□□□□ -0.28
TSEN54-208ENST00000583173 LBHQ53QV2 105 aaPredicted RBP13.33□□□□□ -0.28
TSEN54-208ENST00000583173 MRPL55Q7Z7F7 128 aaKnown RBP13.32□□□□□ -0.28
TSEN54-208ENST00000583173 LINC00167Q96N53 147 aa13.32□□□□□ -0.28
TSEN54-208ENST00000583173 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
TSEN54-208ENST00000583173 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
TSEN54-208ENST00000583173 LITAFQ99732 161 aa13.3□□□□□ -0.28
TSEN54-208ENST00000583173 FAT3Q8TDW7 4589 aa13.3□□□□□ -0.28
TSEN54-208ENST00000583173 RPL24P83731 157 aaKnown RBP13.29□□□□□ -0.28
TSEN54-208ENST00000583173 DAND5Q8N907 189 aa13.28□□□□□ -0.28
TSEN54-208ENST00000583173 LRP1Q07954 4544 aaKnown RBP13.27□□□□□ -0.28
TSEN54-208ENST00000583173 ZNF815PA8K554 130 aa13.27□□□□□ -0.29
TSEN54-208ENST00000583173 UBE2BP63146 152 aa13.27□□□□□ -0.29
TSEN54-208ENST00000583173 TIMM17BO60830 172 aa13.26□□□□□ -0.29
TSEN54-208ENST00000583173 C1orf137Q5JT78 98 aa13.26□□□□□ -0.29
TSEN54-208ENST00000583173 NKAPP1Q8N9T2 125 aa13.26□□□□□ -0.29
TSEN54-208ENST00000583173 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
TSEN54-208ENST00000583173 EIF4EBP3O60516 100 aaPredicted RBP13.24□□□□□ -0.29
TSEN54-208ENST00000583173 SCGB1D1O95968 90 aa13.24□□□□□ -0.29
TSEN54-208ENST00000583173 SOSTDC1Q6X4U4 206 aa13.24□□□□□ -0.29
TSEN54-208ENST00000583173 PCP2Q8IVA1 136 aa13.24□□□□□ -0.29
TSEN54-208ENST00000583173 BOD1L2Q8IYS8 172 aa13.24□□□□□ -0.29
TSEN54-208ENST00000583173 IGLV1-50A0A075B6I6 118 aa13.23□□□□□ -0.29
TSEN54-208ENST00000583173 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
TSEN54-208ENST00000583173 IGLV7-43P04211 117 aa13.23□□□□□ -0.29
TSEN54-208ENST00000583173 SPINK6Q6UWN8 80 aa13.22□□□□□ -0.29
TSEN54-208ENST00000583173 M0R378 163 aa13.21□□□□□ -0.29
TSEN54-208ENST00000583173 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
TSEN54-208ENST00000583173 JOSD1Q15040 202 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-208ENST00000583173 KRTAP29-1A8MX34 341 aaPredicted RBP13.17□□□□□ -0.3
TSEN54-208ENST00000583173 HSBP1L1C9JCN9 74 aa13.17□□□□□ -0.3
TSEN54-208ENST00000583173 NDUFC2O95298 119 aa13.17□□□□□ -0.3
TSEN54-208ENST00000583173 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
TSEN54-208ENST00000583173 IGKV2-28A0A075B6P5 120 aa13.15□□□□□ -0.3
TSEN54-208ENST00000583173 BCE1O60756 84 aa13.15□□□□□ -0.3
TSEN54-208ENST00000583173 IGKV2D-28P01615 120 aa13.15□□□□□ -0.3
TSEN54-208ENST00000583173 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
TSEN54-208ENST00000583173 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
TSEN54-208ENST00000583173 TRBV10-2A0A0K0K1G8 114 aa13.14□□□□□ -0.31
TSEN54-208ENST00000583173 OXTP01178 125 aa13.14□□□□□ -0.31
TSEN54-208ENST00000583173 NCR3O14931 201 aa13.13□□□□□ -0.31
TSEN54-208ENST00000583173 ZNF861PO60384 105 aa13.13□□□□□ -0.31
TSEN54-208ENST00000583173 NPC2P61916 151 aa13.13□□□□□ -0.31
TSEN54-208ENST00000583173 SCGB1D4Q6XE38 83 aa13.13□□□□□ -0.31
TSEN54-208ENST00000583173 KRTAP13-1Q8IUC0 172 aa13.13□□□□□ -0.31
TSEN54-208ENST00000583173 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
TSEN54-208ENST00000583173 TMEM238C9JI98 176 aa13.11□□□□□ -0.31
TSEN54-208ENST00000583173 TMEM126AQ9H061 195 aa13.11□□□□□ -0.31
TSEN54-208ENST00000583173 PPDPFQ9H3Y8 114 aa13.11□□□□□ -0.31
TSEN54-208ENST00000583173 KCNQ1DNQ9H478 68 aa13.11□□□□□ -0.31
TSEN54-208ENST00000583173 REG3GQ6UW15 175 aa13.1□□□□□ -0.31
TSEN54-208ENST00000583173 Q6ZVH6 145 aa13.1□□□□□ -0.31
TSEN54-208ENST00000583173 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
TSEN54-208ENST00000583173 TNXBP22105 4242 aa13.09□□□□□ -0.31
TSEN54-208ENST00000583173 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
TSEN54-208ENST00000583173 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
TSEN54-208ENST00000583173 DIRC1Q969H9 104 aa13.09□□□□□ -0.31
TSEN54-208ENST00000583173 H0Y9J4 135 aa13.08□□□□□ -0.32
TSEN54-208ENST00000583173 COX8AP10176 69 aa13.08□□□□□ -0.32
TSEN54-208ENST00000583173 IGLV6-57P01721 117 aa13.07□□□□□ -0.32
TSEN54-208ENST00000583173 IFITM1P13164 125 aa13.07□□□□□ -0.32
TSEN54-208ENST00000583173 SPRR1AP35321 89 aa13.07□□□□□ -0.32
TSEN54-208ENST00000583173 KRTAP4-16G5E9R7 235 aaPredicted RBP13.06□□□□□ -0.32
TSEN54-208ENST00000583173 DLEU1O43261 78 aa13.06□□□□□ -0.32
TSEN54-208ENST00000583173 LINC01600Q96MT4 127 aa13.06□□□□□ -0.32
TSEN54-208ENST00000583173 PRYO14603 147 aa13.05□□□□□ -0.32
TSEN54-208ENST00000583173 MT1HL1P0DM35 61 aa13.05□□□□□ -0.32
TSEN54-208ENST00000583173 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
TSEN54-208ENST00000583173 DDTP30046 118 aa13.04□□□□□ -0.32
TSEN54-208ENST00000583173 RPL28P46779 137 aaKnown RBP13.04□□□□□ -0.32
TSEN54-208ENST00000583173 SPATA45Q537H7 98 aa13.04□□□□□ -0.32
TSEN54-208ENST00000583173 PAM16Q9Y3D7 125 aa13.04□□□□□ -0.32
TSEN54-208ENST00000583173 KRTAP1-4P0C5Y4 121 aa13.02□□□□□ -0.33
TSEN54-208ENST00000583173 VAMP8Q9BV40 100 aa13.02□□□□□ -0.33
TSEN54-208ENST00000583173 DMBT1Q9UGM3 2413 aaPredicted RBP13.01□□□□□ -0.33
TSEN54-208ENST00000583173 KRTAP10-8P60410 259 aa13.01□□□□□ -0.33
TSEN54-208ENST00000583173 LINC00337Q8N6G1 96 aa13.01□□□□□ -0.33
TSEN54-208ENST00000583173 C14orf144Q96I85 54 aa13.01□□□□□ -0.33
TSEN54-208ENST00000583173 HERC1Q15751 4861 aa13□□□□□ -0.33
TSEN54-208ENST00000583173 UBE2AP49459 152 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms