RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 LINC00158P58513 81 aa6.48□□□□□ -1.37
TOP3A-212ENST00000582122 KRTDAPP60985 99 aa6.48□□□□□ -1.37
TOP3A-212ENST00000582122 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
TOP3A-212ENST00000582122 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
TOP3A-212ENST00000582122 C22orf24Q9Y442 160 aa6.48□□□□□ -1.37
TOP3A-212ENST00000582122 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
TOP3A-212ENST00000582122 PMCHL2Q9BQD1 86 aa6.47□□□□□ -1.37
TOP3A-212ENST00000582122 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
TOP3A-212ENST00000582122 PSORS1C2Q9UIG4 136 aa6.47□□□□□ -1.37
TOP3A-212ENST00000582122 HMCN2Q8NDA2 5059 aa6.47□□□□□ -1.37
TOP3A-212ENST00000582122 SNRPEP62304 92 aaKnown RBP6.46□□□□□ -1.38
TOP3A-212ENST00000582122 SERTAD4-AS1Q5TG53 156 aa6.46□□□□□ -1.38
TOP3A-212ENST00000582122 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
TOP3A-212ENST00000582122 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
TOP3A-212ENST00000582122 REG3GQ6UW15 175 aa6.45□□□□□ -1.38
TOP3A-212ENST00000582122 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
TOP3A-212ENST00000582122 SMIM13P0DJ93 91 aa6.44□□□□□ -1.38
TOP3A-212ENST00000582122 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
TOP3A-212ENST00000582122 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
TOP3A-212ENST00000582122 IGKV2D-26A0A0A0MRZ7 120 aa6.43□□□□□ -1.38
TOP3A-212ENST00000582122 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
TOP3A-212ENST00000582122 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
TOP3A-212ENST00000582122 HIST1H2BLQ99880 126 aa6.43□□□□□ -1.38
TOP3A-212ENST00000582122 MIEN1Q9BRT3 115 aa6.43□□□□□ -1.38
TOP3A-212ENST00000582122 LOC107984156A0A0G2JMH3 177 aa6.42□□□□□ -1.38
TOP3A-212ENST00000582122 VPREB1P12018 145 aa6.42□□□□□ -1.38
TOP3A-212ENST00000582122 TSPEAR-AS2P59090 65 aa6.42□□□□□ -1.38
TOP3A-212ENST00000582122 S100A12P80511 92 aa6.42□□□□□ -1.38
TOP3A-212ENST00000582122 SRSF9Q13242 221 aaKnown RBP eCLIP6.42□□□□□ -1.38
TOP3A-212ENST00000582122 ARL17AQ8IVW1 177 aa6.42□□□□□ -1.38
TOP3A-212ENST00000582122 MIR7-3HGQ8N6C7 128 aa6.42□□□□□ -1.38
TOP3A-212ENST00000582122 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
TOP3A-212ENST00000582122 A0A0U1RRA0 63 aa6.41□□□□□ -1.38
TOP3A-212ENST00000582122 HSBP1L1C9JCN9 74 aa6.41□□□□□ -1.38
TOP3A-212ENST00000582122 TIMM17BO60830 172 aa6.41□□□□□ -1.38
TOP3A-212ENST00000582122 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
TOP3A-212ENST00000582122 M0R378 163 aa6.4□□□□□ -1.38
TOP3A-212ENST00000582122 BCE1O60756 84 aa6.4□□□□□ -1.38
TOP3A-212ENST00000582122 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.38
TOP3A-212ENST00000582122 HNRNPA3P51991 378 aaKnown RBP6.4□□□□□ -1.38
TOP3A-212ENST00000582122 COPS9Q8WXC6 57 aa6.4□□□□□ -1.38
TOP3A-212ENST00000582122 CBY1Q9Y3M2 126 aa6.4□□□□□ -1.38
TOP3A-212ENST00000582122 A0A0J9YXY3 114 aa6.39□□□□□ -1.39
TOP3A-212ENST00000582122 C5orf52A6NGY3 159 aa6.39□□□□□ -1.39
TOP3A-212ENST00000582122 ZNF815PA8K554 130 aa6.39□□□□□ -1.39
TOP3A-212ENST00000582122 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
TOP3A-212ENST00000582122 TRBV10-2A0A0K0K1G8 114 aa6.38□□□□□ -1.39
TOP3A-212ENST00000582122 GAGE10A6NGK3 116 aa6.38□□□□□ -1.39
TOP3A-212ENST00000582122 RPL37AP8A6NKH3 93 aa6.38□□□□□ -1.39
TOP3A-212ENST00000582122 ZNF861PO60384 105 aa6.38□□□□□ -1.39
TOP3A-212ENST00000582122 NDUFC2O95298 119 aa6.38□□□□□ -1.39
TOP3A-212ENST00000582122 TMEM238C9JI98 176 aa6.37□□□□□ -1.39
TOP3A-212ENST00000582122 H0Y9J4 135 aa6.37□□□□□ -1.39
TOP3A-212ENST00000582122 SCGB1D4Q6XE38 83 aa6.37□□□□□ -1.39
TOP3A-212ENST00000582122 Q6ZVH6 145 aa6.37□□□□□ -1.39
TOP3A-212ENST00000582122 KRTAP11-1Q8IUC1 163 aa6.37□□□□□ -1.39
TOP3A-212ENST00000582122 LINC01600Q96MT4 127 aa6.37□□□□□ -1.39
TOP3A-212ENST00000582122 SPANXB1Q9NS25 103 aaPredicted RBP6.37□□□□□ -1.39
TOP3A-212ENST00000582122 IGKV2-28A0A075B6P5 120 aa6.36□□□□□ -1.39
TOP3A-212ENST00000582122 IGKV2D-28P01615 120 aa6.36□□□□□ -1.39
TOP3A-212ENST00000582122 PRYO14603 147 aa6.35□□□□□ -1.39
TOP3A-212ENST00000582122 UBE2AP49459 152 aa6.35□□□□□ -1.39
TOP3A-212ENST00000582122 ATOH7Q8N100 152 aa6.35□□□□□ -1.39
TOP3A-212ENST00000582122 PPDPFQ9H3Y8 114 aa6.35□□□□□ -1.39
TOP3A-212ENST00000582122 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
TOP3A-212ENST00000582122 SCGB1D1O95968 90 aa6.34□□□□□ -1.39
TOP3A-212ENST00000582122 IFITM1P13164 125 aa6.34□□□□□ -1.39
TOP3A-212ENST00000582122 ANKRD39Q53RE8 183 aa6.34□□□□□ -1.39
TOP3A-212ENST00000582122 DAND5Q8N907 189 aa6.34□□□□□ -1.39
TOP3A-212ENST00000582122 TMEM126AQ9H061 195 aa6.34□□□□□ -1.39
TOP3A-212ENST00000582122 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
TOP3A-212ENST00000582122 SPANXCQ9NY87 97 aa6.34□□□□□ -1.39
TOP3A-212ENST00000582122 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
TOP3A-212ENST00000582122 LINC00518Q8N0U6 118 aa6.33□□□□□ -1.4
TOP3A-212ENST00000582122 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
TOP3A-212ENST00000582122 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
TOP3A-212ENST00000582122 NCR3O14931 201 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 DDTP30046 118 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 RPL13AP40429 203 aaKnown RBP6.32□□□□□ -1.4
TOP3A-212ENST00000582122 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 FAM19A1Q7Z5A9 133 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 LINC00337Q8N6G1 96 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 Q8NDZ9 215 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 LINC00308Q8TCZ7 52 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 LITAFQ99732 161 aa6.32□□□□□ -1.4
TOP3A-212ENST00000582122 TRBV10-3A0A0K0K1G6 114 aa6.3□□□□□ -1.4
TOP3A-212ENST00000582122 ETDCA0A1B0GVM5 59 aa6.3□□□□□ -1.4
TOP3A-212ENST00000582122 HINT1P49773 126 aaPredicted RBP6.3□□□□□ -1.4
TOP3A-212ENST00000582122 KRTAP13-1Q8IUC0 172 aa6.3□□□□□ -1.4
TOP3A-212ENST00000582122 IGLV6-57P01721 117 aa6.29□□□□□ -1.4
TOP3A-212ENST00000582122 SPRR1AP35321 89 aa6.29□□□□□ -1.4
TOP3A-212ENST00000582122 SOSTDC1Q6X4U4 206 aa6.29□□□□□ -1.4
TOP3A-212ENST00000582122 PCP2Q8IVA1 136 aa6.29□□□□□ -1.4
TOP3A-212ENST00000582122 TTTY13Q9BZ97 58 aa6.29□□□□□ -1.4
TOP3A-212ENST00000582122 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
TOP3A-212ENST00000582122 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
TOP3A-212ENST00000582122 NPC2P61916 151 aa6.28□□□□□ -1.4
TOP3A-212ENST00000582122 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-212ENST00000582122 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
TOP3A-212ENST00000582122 TRAV23DV6A0A075B6W5 121 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms