RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 C6orf226Q5I0X4 101 aa12.89□□□□□ -0.35
CCDC42-203ENST00000581598 ZNF625Q96I27 306 aaPredicted RBP12.89□□□□□ -0.35
CCDC42-203ENST00000581598 LGALS3P17931 250 aaKnown RBP12.88□□□□□ -0.35
CCDC42-203ENST00000581598 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
CCDC42-203ENST00000581598 NMUP48645 174 aa12.87□□□□□ -0.35
CCDC42-203ENST00000581598 SPATA45Q537H7 98 aa12.87□□□□□ -0.35
CCDC42-203ENST00000581598 SFTA2Q6UW10 78 aa12.87□□□□□ -0.35
CCDC42-203ENST00000581598 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
CCDC42-203ENST00000581598 NDUFA12Q9UI09 145 aa12.87□□□□□ -0.35
CCDC42-203ENST00000581598 PSORS1C2Q9UIG4 136 aa12.87□□□□□ -0.35
CCDC42-203ENST00000581598 CKS1BP61024 79 aa12.86□□□□□ -0.35
CCDC42-203ENST00000581598 C10orf25Q5T742 122 aa12.86□□□□□ -0.35
CCDC42-203ENST00000581598 LRP2P98164 4655 aa12.86□□□□□ -0.35
CCDC42-203ENST00000581598 UNQ6190/PRO20217Q6UXQ8 127 aa12.85□□□□□ -0.35
CCDC42-203ENST00000581598 C6orf48Q9UBA6 75 aa12.85□□□□□ -0.35
CCDC42-203ENST00000581598 S100A12P80511 92 aa12.84□□□□□ -0.35
CCDC42-203ENST00000581598 PHF5AQ7RTV0 110 aaKnown RBP12.84□□□□□ -0.35
CCDC42-203ENST00000581598 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
CCDC42-203ENST00000581598 TTTY13Q9BZ97 58 aa12.84□□□□□ -0.35
CCDC42-203ENST00000581598 MYMXA0A1B0GTQ4 84 aa12.83□□□□□ -0.36
CCDC42-203ENST00000581598 TRBV30A0A0K0K1B3 111 aa12.82□□□□□ -0.36
CCDC42-203ENST00000581598 COX8AP10176 69 aa12.82□□□□□ -0.36
CCDC42-203ENST00000581598 HERV-K104P63124 156 aa12.82□□□□□ -0.36
CCDC42-203ENST00000581598 RNF213Q63HN8 5207 aa12.82□□□□□ -0.36
CCDC42-203ENST00000581598 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
CCDC42-203ENST00000581598 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
CCDC42-203ENST00000581598 C12orf57Q99622 126 aa12.8□□□□□ -0.36
CCDC42-203ENST00000581598 DLEU1O43261 78 aa12.79□□□□□ -0.36
CCDC42-203ENST00000581598 BOD1L2Q8IYS8 172 aa12.79□□□□□ -0.36
CCDC42-203ENST00000581598 LINC00518Q8N0U6 118 aa12.79□□□□□ -0.36
CCDC42-203ENST00000581598 FAM168BA1KXE4 195 aa12.78□□□□□ -0.36
CCDC42-203ENST00000581598 A0A0J9YXY3 114 aa12.77□□□□□ -0.37
CCDC42-203ENST00000581598 C14orf144Q96I85 54 aa12.77□□□□□ -0.37
CCDC42-203ENST00000581598 NDUFC2-KCTD14E9PQ53 114 aa12.76□□□□□ -0.37
CCDC42-203ENST00000581598 IGLV7-43P04211 117 aa12.76□□□□□ -0.37
CCDC42-203ENST00000581598 GAGE2EQ4V326 116 aa12.76□□□□□ -0.37
CCDC42-203ENST00000581598 GAGE2DQ9UEU5 116 aa12.76□□□□□ -0.37
CCDC42-203ENST00000581598 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
CCDC42-203ENST00000581598 KRTAP7-1Q8IUC3 87 aa12.75□□□□□ -0.37
CCDC42-203ENST00000581598 COX17Q14061 63 aa12.74□□□□□ -0.37
CCDC42-203ENST00000581598 SLC25A34Q6PIV7 304 aa12.74□□□□□ -0.37
CCDC42-203ENST00000581598 FAM19A5Q7Z5A7 132 aaPredicted RBP12.74□□□□□ -0.37
CCDC42-203ENST00000581598 DIRC1Q969H9 104 aa12.74□□□□□ -0.37
CCDC42-203ENST00000581598 TP73-AS1Q9UF72 201 aa12.74□□□□□ -0.37
CCDC42-203ENST00000581598 LINC00587B1AMM8 73 aa12.73□□□□□ -0.37
CCDC42-203ENST00000581598 TIMM17BO60830 172 aa12.73□□□□□ -0.37
CCDC42-203ENST00000581598 KRTAP11-1Q8IUC1 163 aa12.73□□□□□ -0.37
CCDC42-203ENST00000581598 MEIG1Q5JSS6 88 aa12.72□□□□□ -0.37
CCDC42-203ENST00000581598 LITAFQ99732 161 aa12.72□□□□□ -0.37
CCDC42-203ENST00000581598 M0QXV9 152 aa12.71□□□□□ -0.37
CCDC42-203ENST00000581598 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.37
CCDC42-203ENST00000581598 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
CCDC42-203ENST00000581598 C9orf129Q5T035 196 aaKnown RBP12.7□□□□□ -0.38
CCDC42-203ENST00000581598 H0Y9J4 135 aa12.69□□□□□ -0.38
CCDC42-203ENST00000581598 PFN2P35080 140 aa12.69□□□□□ -0.38
CCDC42-203ENST00000581598 UQCR10Q9UDW1 63 aa12.69□□□□□ -0.38
CCDC42-203ENST00000581598 LINC00158P58513 81 aa12.68□□□□□ -0.38
CCDC42-203ENST00000581598 PRO1933Q9H354 126 aa12.68□□□□□ -0.38
CCDC42-203ENST00000581598 ADAMTSL4-AS1Q5T5F5 129 aa12.67□□□□□ -0.38
CCDC42-203ENST00000581598 C2orf91Q6ZV80 131 aa12.67□□□□□ -0.38
CCDC42-203ENST00000581598 HIGD1BQ9P298 99 aa12.67□□□□□ -0.38
CCDC42-203ENST00000581598 TMEM238C9JI98 176 aa12.66□□□□□ -0.38
CCDC42-203ENST00000581598 UBE2BP63146 152 aa12.66□□□□□ -0.38
CCDC42-203ENST00000581598 A0A0U1RRA0 63 aa12.65□□□□□ -0.38
CCDC42-203ENST00000581598 MIR7-3HGQ8N6C7 128 aa12.65□□□□□ -0.38
CCDC42-203ENST00000581598 MIEN1Q9BRT3 115 aa12.65□□□□□ -0.38
CCDC42-203ENST00000581598 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
CCDC42-203ENST00000581598 SPANXB1Q9NS25 103 aaPredicted RBP12.65□□□□□ -0.38
CCDC42-203ENST00000581598 SPANXCQ9NY87 97 aa12.65□□□□□ -0.38
CCDC42-203ENST00000581598 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
CCDC42-203ENST00000581598 TSTD3H0UI37 97 aa12.62□□□□□ -0.39
CCDC42-203ENST00000581598 Q6ZVH6 145 aa12.62□□□□□ -0.39
CCDC42-203ENST00000581598 PRR26Q8N8Z3 221 aa12.62□□□□□ -0.39
CCDC42-203ENST00000581598 DAND5Q8N907 189 aa12.62□□□□□ -0.39
CCDC42-203ENST00000581598 IGLV1-50A0A075B6I6 118 aa12.61□□□□□ -0.39
CCDC42-203ENST00000581598 LOC107984156A0A0G2JMH3 177 aa12.61□□□□□ -0.39
CCDC42-203ENST00000581598 KRTAP1-4P0C5Y4 121 aa12.61□□□□□ -0.39
CCDC42-203ENST00000581598 ARL17AQ8IVW1 177 aa12.61□□□□□ -0.39
CCDC42-203ENST00000581598 PPDPFQ9H3Y8 114 aa12.6□□□□□ -0.39
CCDC42-203ENST00000581598 SOSTDC1Q6X4U4 206 aa12.59□□□□□ -0.39
CCDC42-203ENST00000581598 XAGE1AQ9HD64 81 aa12.59□□□□□ -0.39
CCDC42-203ENST00000581598 C22orf24Q9Y442 160 aa12.59□□□□□ -0.39
CCDC42-203ENST00000581598 IFITM1P13164 125 aa12.58□□□□□ -0.4
CCDC42-203ENST00000581598 LBHQ53QV2 105 aaPredicted RBP12.58□□□□□ -0.4
CCDC42-203ENST00000581598 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
CCDC42-203ENST00000581598 EIF4EBP3O60516 100 aaPredicted RBP12.57□□□□□ -0.4
CCDC42-203ENST00000581598 ZNF861PO60384 105 aa12.56□□□□□ -0.4
CCDC42-203ENST00000581598 TAL2Q16559 108 aa12.56□□□□□ -0.4
CCDC42-203ENST00000581598 COPS9Q8WXC6 57 aa12.54□□□□□ -0.4
CCDC42-203ENST00000581598 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
CCDC42-203ENST00000581598 RPL13AP40429 203 aaKnown RBP12.53□□□□□ -0.4
CCDC42-203ENST00000581598 NPC2P61916 151 aa12.53□□□□□ -0.4
CCDC42-203ENST00000581598 MUSTN1Q8IVN3 82 aa12.53□□□□□ -0.4
CCDC42-203ENST00000581598 HSD52Q0P140 79 aa12.52□□□□□ -0.41
CCDC42-203ENST00000581598 MRPL55Q7Z7F7 128 aaKnown RBP12.52□□□□□ -0.41
CCDC42-203ENST00000581598 Q8NDZ9 215 aa12.52□□□□□ -0.41
CCDC42-203ENST00000581598 VPREB1P12018 145 aa12.51□□□□□ -0.41
CCDC42-203ENST00000581598 IGLV5-37A0A075B6J1 123 aa12.5□□□□□ -0.41
CCDC42-203ENST00000581598 NDUFC2O95298 119 aa12.5□□□□□ -0.41
CCDC42-203ENST00000581598 DDTP30046 118 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms