RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SPINK9Q5DT21 86 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 TMEM244Q5VVB8 128 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 PP6455Q8WZ26 134 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 TMEM203Q969S6 136 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 COA4Q9NYJ1 87 aa0.9□□□□□ -2.27
SMCHD1-205ENST00000581383 MUC5BQ9HC84 5762 aaPredicted RBP0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 PKD1P98161 4303 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 TRAV23DV6A0A075B6W5 121 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 OOSP1A8MZH6 123 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 C9JAW5 83 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 MCRIP1C9JLW8 97 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 SULT1C4O75897 302 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 NDUFA3O95167 84 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 SLC25A5P05141 298 aaKnown RBP0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 ZNF137PP52743 207 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 FXYD4P59646 89 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 DEFB1P60022 68 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 FXYD3Q14802 87 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 MORN2Q502X0 79 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 ACBD7Q8N6N7 88 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 ARHGAP5-AS1Q96IT6 56 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 S100A13Q99584 98 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 FXYD6Q9H0Q3 95 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 LPAR5Q9H1C0 372 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 TAS2R8Q9NYW2 309 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 GSKIPQ9P0R6 139 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 HIGD1AQ9Y241 93 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 AP4S1Q9Y587 144 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 DNAH8Q96JB1 4490 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 WNK2Q9Y3S1 2297 aa0.89□□□□□ -2.27
SMCHD1-205ENST00000581383 FAT3Q8TDW7 4589 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 LOC100130705A0A1B0GUX0 176 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 TMEM14DPA8MWL7 114 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 UQCRQO14949 82 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 HTN3P15516 51 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 HIST1H1DP16402 221 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 SNRPGP62308 76 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 QRFPP83859 136 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 DEFB114Q30KQ6 69 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 HSD17B12Q53GQ0 312 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 Q56UQ5 140 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 TMEM91Q6ZNR0 172 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 TCTE3Q8IZS6 198 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 CIB3Q96Q77 187 aaPredicted RBP0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 MRPL36Q9P0J6 103 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 ABRACLQ9P1F3 81 aa0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 LSM2Q9Y333 95 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-205ENST00000581383 IGLC7A0M8Q6 106 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 TMEM189A5PLL7 270 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 NUPR2A6NF83 97 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 EFCAB10A6NFE3 127 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 FAM223BA6NKX1 122 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 H3BUA1 57 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 K7EIM0 57 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 YPEL1O60688 119 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 IGHV3-33P01772 117 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 CBLN1P23435 193 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 GNG2P59768 71 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 DEFB131AP59861 70 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 ARPC4P59998 168 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 LSM3P62310 102 aaKnown RBP0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 WT1-ASQ06250 92 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 IZUMO2Q6UXV1 221 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 LINC00575Q6W349 94 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 ZNF818PQ6ZRF7 136 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 UBE2DNLQ8IWF7 75 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 FAM223AQ8IWN6 122 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 C8orf59Q8N0T1 100 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 TCTEX1D1Q8N7M0 179 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 C5orf17Q8NAS9 161 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 AP1S3Q96PC3 154 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 ATG5Q9H1Y0 275 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 RABAC1Q9UI14 185 aa0.87□□□□□ -2.27
SMCHD1-205ENST00000581383 FAT4Q6V0I7 4981 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 DEFB131BA0A096LNP1 70 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 BORCS7-ASMTA0A0B4J1R7 106 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 IFITM5A6NNB3 132 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 SNRPD3P62318 126 aaKnown RBP0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 CCDC58Q4VC31 144 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 SPATA45Q537H7 98 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 PSMG4Q5JS54 123 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 SNX29P2Q8IUI4 249 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 TTC9CQ8N5M4 171 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 TMEM167AQ8TBQ9 72 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 LSM10Q969L4 123 aaKnown RBP0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 USMG5Q96IX5 58 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 RHPN1-AS1Q9BWJ2 59 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 SLC35B3Q9H1N7 401 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 SPANXA1Q9NS26 97 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 APLNQ9ULZ1 77 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 LRP1Q07954 4544 aaKnown RBP0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 DMBT1Q9UGM3 2413 aaPredicted RBP0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 VPS13BQ7Z7G8 4022 aa0.86□□□□□ -2.27
SMCHD1-205ENST00000581383 TRAV12-2A0A075B6T6 113 aa0.85□□□□□ -2.27
SMCHD1-205ENST00000581383 A0A096LPF7 62 aa0.85□□□□□ -2.27
SMCHD1-205ENST00000581383 A0A0J9YY99 117 aa0.85□□□□□ -2.27
SMCHD1-205ENST00000581383 I3L2K1 104 aa0.85□□□□□ -2.27
SMCHD1-205ENST00000581383 M0R2Z0 102 aa0.85□□□□□ -2.27
SMCHD1-205ENST00000581383 NDUFA4O00483 81 aa0.85□□□□□ -2.27
SMCHD1-205ENST00000581383 GNG7O60262 68 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms