RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 A8MWP4 228 aa9.86□□□□□ -0.83
CSNK1D-217ENST00000581241 COA5Q86WW8 74 aa9.85□□□□□ -0.83
CSNK1D-217ENST00000581241 VPREB1P12018 145 aa9.83□□□□□ -0.84
CSNK1D-217ENST00000581241 K7EQZ3 153 aa9.83□□□□□ -0.84
CSNK1D-217ENST00000581241 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
CSNK1D-217ENST00000581241 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
CSNK1D-217ENST00000581241 NAV3Q8IVL0 2385 aa9.82□□□□□ -0.84
CSNK1D-217ENST00000581241 A8MUN3 132 aa9.81□□□□□ -0.84
CSNK1D-217ENST00000581241 IGLV8-61A0A075B6I0 122 aa9.8□□□□□ -0.84
CSNK1D-217ENST00000581241 RIF1Q5UIP0 2472 aaKnown RBP9.8□□□□□ -0.84
CSNK1D-217ENST00000581241 HIVEP2P31629 2446 aa9.8□□□□□ -0.84
CSNK1D-217ENST00000581241 Q6ZRP5 223 aa9.8□□□□□ -0.84
CSNK1D-217ENST00000581241 CHTF8P0CG12 524 aa9.8□□□□□ -0.84
CSNK1D-217ENST00000581241 RTL8CO15255 209 aa9.78□□□□□ -0.84
CSNK1D-217ENST00000581241 CREBBPQ92793 2442 aa9.78□□□□□ -0.84
CSNK1D-217ENST00000581241 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
CSNK1D-217ENST00000581241 Q8NAQ8 132 aa9.77□□□□□ -0.85
CSNK1D-217ENST00000581241 KLKP1Q107X0 134 aa9.76□□□□□ -0.85
CSNK1D-217ENST00000581241 Q96NJ1 140 aa9.75□□□□□ -0.85
CSNK1D-217ENST00000581241 IGLV1-50A0A075B6I6 118 aa9.75□□□□□ -0.85
CSNK1D-217ENST00000581241 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
CSNK1D-217ENST00000581241 NBASA2RRP1 2371 aa9.74□□□□□ -0.85
CSNK1D-217ENST00000581241 LINC00588Q9Y4M8 146 aa9.74□□□□□ -0.85
CSNK1D-217ENST00000581241 ANKHD1Q8IWZ3 2542 aaKnown RBP9.74□□□□□ -0.85
CSNK1D-217ENST00000581241 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
CSNK1D-217ENST00000581241 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
CSNK1D-217ENST00000581241 KCNQ1DNQ9H478 68 aa9.73□□□□□ -0.85
CSNK1D-217ENST00000581241 UQCR11O14957 56 aa9.72□□□□□ -0.85
CSNK1D-217ENST00000581241 SORL1Q92673 2214 aa9.71□□□□□ -0.85
CSNK1D-217ENST00000581241 LINC01600Q96MT4 127 aa9.71□□□□□ -0.85
CSNK1D-217ENST00000581241 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.85
CSNK1D-217ENST00000581241 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
CSNK1D-217ENST00000581241 DNAH10OSP0CZ25 163 aa9.7□□□□□ -0.86
CSNK1D-217ENST00000581241 IGFL1Q6UW32 110 aa9.7□□□□□ -0.86
CSNK1D-217ENST00000581241 SSBP3-AS1Q7Z2R9 100 aa9.69□□□□□ -0.86
CSNK1D-217ENST00000581241 ZFHX2Q9C0A1 2572 aaPredicted RBP9.68□□□□□ -0.86
CSNK1D-217ENST00000581241 MIR22HGQ0VDD5 57 aa9.68□□□□□ -0.86
CSNK1D-217ENST00000581241 H7BZZ5 65 aa9.67□□□□□ -0.86
CSNK1D-217ENST00000581241 CD164Q04900 197 aa9.67□□□□□ -0.86
CSNK1D-217ENST00000581241 PRR15Q8IV56 129 aa9.67□□□□□ -0.86
CSNK1D-217ENST00000581241 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
CSNK1D-217ENST00000581241 EIF4EBP3O60516 100 aaPredicted RBP9.66□□□□□ -0.86
CSNK1D-217ENST00000581241 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
CSNK1D-217ENST00000581241 WNK1Q9H4A3 2382 aa9.65□□□□□ -0.86
CSNK1D-217ENST00000581241 PLA2G1BP04054 148 aaKnown RBP9.65□□□□□ -0.87
CSNK1D-217ENST00000581241 KTN1-AS1Q86SY8 53 aa9.64□□□□□ -0.87
CSNK1D-217ENST00000581241 PCSK5Q92824 1860 aa9.63□□□□□ -0.87
CSNK1D-217ENST00000581241 CSNK1G2-AS1Q8NCQ2 148 aa9.63□□□□□ -0.87
CSNK1D-217ENST00000581241 DSCR10P59022 87 aa9.62□□□□□ -0.87
CSNK1D-217ENST00000581241 Q8N377 158 aa9.62□□□□□ -0.87
CSNK1D-217ENST00000581241 A0A1B0GVX0 72 aa9.61□□□□□ -0.87
CSNK1D-217ENST00000581241 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
CSNK1D-217ENST00000581241 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
CSNK1D-217ENST00000581241 C9orf129Q5T035 196 aaKnown RBP9.59□□□□□ -0.87
CSNK1D-217ENST00000581241 LCA10Q71F78 164 aa9.58□□□□□ -0.88
CSNK1D-217ENST00000581241 PRR34Q9NV39 138 aa9.57□□□□□ -0.88
CSNK1D-217ENST00000581241 FAM208BQ5VWN6 2430 aa9.57□□□□□ -0.88
CSNK1D-217ENST00000581241 PTPRQQ9UMZ3 2332 aa9.57□□□□□ -0.88
CSNK1D-217ENST00000581241 CRIPTQ9P021 101 aa9.57□□□□□ -0.88
CSNK1D-217ENST00000581241 APLNQ9ULZ1 77 aa9.56□□□□□ -0.88
CSNK1D-217ENST00000581241 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
CSNK1D-217ENST00000581241 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
CSNK1D-217ENST00000581241 KRTAP24-1Q3LI83 254 aa9.53□□□□□ -0.88
CSNK1D-217ENST00000581241 MUC6Q6W4X9 2439 aa9.52□□□□□ -0.89
CSNK1D-217ENST00000581241 CDC42SE1Q9NRR8 79 aa9.5□□□□□ -0.89
CSNK1D-217ENST00000581241 A0A0G2JQZ4 141 aa9.49□□□□□ -0.89
CSNK1D-217ENST00000581241 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
CSNK1D-217ENST00000581241 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
CSNK1D-217ENST00000581241 LINC00612Q8N6U2 182 aa9.48□□□□□ -0.89
CSNK1D-217ENST00000581241 ZNF861PO60384 105 aa9.48□□□□□ -0.89
CSNK1D-217ENST00000581241 CSPG4Q6UVK1 2322 aa9.48□□□□□ -0.89
CSNK1D-217ENST00000581241 LINC00304Q8N9R0 145 aa9.45□□□□□ -0.9
CSNK1D-217ENST00000581241 Q1T7F1 81 aa9.45□□□□□ -0.9
CSNK1D-217ENST00000581241 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
CSNK1D-217ENST00000581241 A0A1W2PNM2 257 aa9.44□□□□□ -0.9
CSNK1D-217ENST00000581241 OTOGLQ3ZCN5 2332 aa9.44□□□□□ -0.9
CSNK1D-217ENST00000581241 KRTAP10-11P60412 298 aa9.43□□□□□ -0.9
CSNK1D-217ENST00000581241 C19orf73Q9NVV2 129 aa9.43□□□□□ -0.9
CSNK1D-217ENST00000581241 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
CSNK1D-217ENST00000581241 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
CSNK1D-217ENST00000581241 WIPF1O43516 503 aa9.4□□□□□ -0.91
CSNK1D-217ENST00000581241 SPRR4Q96PI1 79 aa9.38□□□□□ -0.91
CSNK1D-217ENST00000581241 OCR1Q9BZK8 76 aa9.37□□□□□ -0.91
CSNK1D-217ENST00000581241 IGLV5-48A0A075B6I7 105 aa9.37□□□□□ -0.91
CSNK1D-217ENST00000581241 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
CSNK1D-217ENST00000581241 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
CSNK1D-217ENST00000581241 WWC2-AS2Q96NR7 200 aa9.35□□□□□ -0.91
CSNK1D-217ENST00000581241 A0A087WTM6 91 aa9.35□□□□□ -0.91
CSNK1D-217ENST00000581241 C9orf163Q8N9P6 203 aa9.34□□□□□ -0.91
CSNK1D-217ENST00000581241 ANAPC11Q9NYG5 84 aa9.34□□□□□ -0.91
CSNK1D-217ENST00000581241 KRTAP10-3P60369 221 aa9.34□□□□□ -0.91
CSNK1D-217ENST00000581241 SPG11Q96JI7 2443 aa9.34□□□□□ -0.91
CSNK1D-217ENST00000581241 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
CSNK1D-217ENST00000581241 HIVEP3Q5T1R4 2406 aa9.32□□□□□ -0.92
CSNK1D-217ENST00000581241 K7EIL1 84 aa9.32□□□□□ -0.92
CSNK1D-217ENST00000581241 A0A096LNT2 108 aa9.3□□□□□ -0.92
CSNK1D-217ENST00000581241 PSORS1C2Q9UIG4 136 aa9.3□□□□□ -0.92
CSNK1D-217ENST00000581241 Q8N1X5 172 aa9.3□□□□□ -0.92
CSNK1D-217ENST00000581241 Q75L30 129 aa9.3□□□□□ -0.92
CSNK1D-217ENST00000581241 A0A0D9SG42 100 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms