RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 TMEM223A0PJW6 202 aa12.52□□□□□ -0.41
CSNK1D-216ENST00000581108 PRLHP81277 87 aa12.52□□□□□ -0.41
CSNK1D-216ENST00000581108 TMEM126AQ9H061 195 aa12.52□□□□□ -0.41
CSNK1D-216ENST00000581108 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
CSNK1D-216ENST00000581108 LINC00158P58513 81 aa12.51□□□□□ -0.41
CSNK1D-216ENST00000581108 A0A0U1RRA0 63 aa12.5□□□□□ -0.41
CSNK1D-216ENST00000581108 FAM19A1Q7Z5A9 133 aa12.5□□□□□ -0.41
CSNK1D-216ENST00000581108 KRTAP13-2Q52LG2 175 aa12.49□□□□□ -0.41
CSNK1D-216ENST00000581108 M0R378 163 aa12.48□□□□□ -0.41
CSNK1D-216ENST00000581108 CBLN2Q8IUK8 224 aa12.48□□□□□ -0.41
CSNK1D-216ENST00000581108 FAM19A2Q8N3H0 131 aa12.48□□□□□ -0.41
CSNK1D-216ENST00000581108 FAM229BQ4G0N7 80 aa12.46□□□□□ -0.41
CSNK1D-216ENST00000581108 HSBP1O75506 76 aa12.45□□□□□ -0.42
CSNK1D-216ENST00000581108 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
CSNK1D-216ENST00000581108 TRGC2P03986 189 aa12.42□□□□□ -0.42
CSNK1D-216ENST00000581108 PLEKHB2Q96CS7 222 aa12.42□□□□□ -0.42
CSNK1D-216ENST00000581108 H0Y8G0 127 aa12.41□□□□□ -0.42
CSNK1D-216ENST00000581108 ATP6V1G1O75348 118 aa12.41□□□□□ -0.42
CSNK1D-216ENST00000581108 IGKV2D-26A0A0A0MRZ7 120 aa12.4□□□□□ -0.42
CSNK1D-216ENST00000581108 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
CSNK1D-216ENST00000581108 BOD1L2Q8IYS8 172 aa12.39□□□□□ -0.43
CSNK1D-216ENST00000581108 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
CSNK1D-216ENST00000581108 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
CSNK1D-216ENST00000581108 HIGD2AQ9BW72 106 aa12.39□□□□□ -0.43
CSNK1D-216ENST00000581108 HERV-K104P63124 156 aa12.38□□□□□ -0.43
CSNK1D-216ENST00000581108 NDUFA12Q9UI09 145 aa12.38□□□□□ -0.43
CSNK1D-216ENST00000581108 LINC00310P59036 64 aa12.37□□□□□ -0.43
CSNK1D-216ENST00000581108 SERF1AO75920 110 aa12.36□□□□□ -0.43
CSNK1D-216ENST00000581108 LEPROTL1O95214 131 aa12.36□□□□□ -0.43
CSNK1D-216ENST00000581108 NCR3O14931 201 aa12.35□□□□□ -0.43
CSNK1D-216ENST00000581108 RETNLBQ9BQ08 111 aa12.35□□□□□ -0.43
CSNK1D-216ENST00000581108 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
CSNK1D-216ENST00000581108 C3orf22Q8N5N4 141 aa12.34□□□□□ -0.43
CSNK1D-216ENST00000581108 MUC2Q02817 5179 aa12.34□□□□□ -0.43
CSNK1D-216ENST00000581108 LINC00587B1AMM8 73 aa12.33□□□□□ -0.44
CSNK1D-216ENST00000581108 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
CSNK1D-216ENST00000581108 SLC7A5P1Q8MH63 180 aa12.32□□□□□ -0.44
CSNK1D-216ENST00000581108 PRYO14603 147 aa12.31□□□□□ -0.44
CSNK1D-216ENST00000581108 LEPROTO15243 131 aa12.31□□□□□ -0.44
CSNK1D-216ENST00000581108 FABP4P15090 132 aa12.31□□□□□ -0.44
CSNK1D-216ENST00000581108 SPRR4Q96PI1 79 aa12.31□□□□□ -0.44
CSNK1D-216ENST00000581108 MAP1LC3CQ9BXW4 147 aa12.31□□□□□ -0.44
CSNK1D-216ENST00000581108 KCNQ1DNQ9H478 68 aa12.31□□□□□ -0.44
CSNK1D-216ENST00000581108 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
CSNK1D-216ENST00000581108 PLNP26678 52 aa12.29□□□□□ -0.44
CSNK1D-216ENST00000581108 SPRR1AP35321 89 aa12.29□□□□□ -0.44
CSNK1D-216ENST00000581108 LINC00337Q8N6G1 96 aa12.29□□□□□ -0.44
CSNK1D-216ENST00000581108 DAND5Q8N907 189 aa12.29□□□□□ -0.44
CSNK1D-216ENST00000581108 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
CSNK1D-216ENST00000581108 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
CSNK1D-216ENST00000581108 COLCA2A8K830 154 aa12.27□□□□□ -0.45
CSNK1D-216ENST00000581108 KRTAP4-16G5E9R7 235 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-216ENST00000581108 J3QQQ9 107 aa12.26□□□□□ -0.45
CSNK1D-216ENST00000581108 DPM2O94777 84 aa12.26□□□□□ -0.45
CSNK1D-216ENST00000581108 SMCR5Q8TEV8 140 aa12.26□□□□□ -0.45
CSNK1D-216ENST00000581108 LOC107984156A0A0G2JMH3 177 aa12.25□□□□□ -0.45
CSNK1D-216ENST00000581108 ETDCA0A1B0GVM5 59 aa12.25□□□□□ -0.45
CSNK1D-216ENST00000581108 ARL17AQ8IVW1 177 aa12.25□□□□□ -0.45
CSNK1D-216ENST00000581108 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-216ENST00000581108 IGKCP01834 107 aa12.24□□□□□ -0.45
CSNK1D-216ENST00000581108 CTAG1AP78358 180 aa12.24□□□□□ -0.45
CSNK1D-216ENST00000581108 HERVK_113P61574 105 aa12.23□□□□□ -0.45
CSNK1D-216ENST00000581108 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
CSNK1D-216ENST00000581108 IGLV7-46A0A075B6I9 117 aa12.21□□□□□ -0.45
CSNK1D-216ENST00000581108 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.45
CSNK1D-216ENST00000581108 NMUP48645 174 aa12.21□□□□□ -0.45
CSNK1D-216ENST00000581108 DDTP30046 118 aa12.2□□□□□ -0.46
CSNK1D-216ENST00000581108 S100A12P80511 92 aa12.2□□□□□ -0.46
CSNK1D-216ENST00000581108 SPAG11AQ6PDA7 123 aa12.2□□□□□ -0.46
CSNK1D-216ENST00000581108 TRBV10-2A0A0K0K1G8 114 aa12.19□□□□□ -0.46
CSNK1D-216ENST00000581108 B5MCH6 92 aa12.19□□□□□ -0.46
CSNK1D-216ENST00000581108 TPRXLQ17RH7 258 aa12.17□□□□□ -0.46
CSNK1D-216ENST00000581108 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
CSNK1D-216ENST00000581108 Q8NBF4 154 aa12.17□□□□□ -0.46
CSNK1D-216ENST00000581108 MIEN1Q9BRT3 115 aa12.17□□□□□ -0.46
CSNK1D-216ENST00000581108 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
CSNK1D-216ENST00000581108 CDIP1Q9H305 208 aa12.16□□□□□ -0.46
CSNK1D-216ENST00000581108 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-216ENST00000581108 EIF4EBP3O60516 100 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-216ENST00000581108 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
CSNK1D-216ENST00000581108 ADAMTSL4-AS1Q5T5F5 129 aa12.15□□□□□ -0.46
CSNK1D-216ENST00000581108 GAGE2AQ6NT46 116 aa12.15□□□□□ -0.46
CSNK1D-216ENST00000581108 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
CSNK1D-216ENST00000581108 NDUFC2O95298 119 aa12.14□□□□□ -0.47
CSNK1D-216ENST00000581108 NPC2P61916 151 aa12.14□□□□□ -0.47
CSNK1D-216ENST00000581108 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
CSNK1D-216ENST00000581108 E9PLD3 99 aa12.13□□□□□ -0.47
CSNK1D-216ENST00000581108 IGLV6-57P01721 117 aa12.13□□□□□ -0.47
CSNK1D-216ENST00000581108 S100A7L2Q5SY68 101 aa12.13□□□□□ -0.47
CSNK1D-216ENST00000581108 Q9BRP9 147 aa12.13□□□□□ -0.47
CSNK1D-216ENST00000581108 MUC17Q685J3 4493 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 SYS1-DBNDD2H3BUS1 97 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
CSNK1D-216ENST00000581108 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms