RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 FAM19A2Q8N3H0 131 aa5.54□□□□□ -1.52
RFFL-208ENST00000581039 ANAPC16Q96DE5 110 aa5.54□□□□□ -1.52
RFFL-208ENST00000581039 KIAA1644Q3SXP7 199 aa5.53□□□□□ -1.52
RFFL-208ENST00000581039 LCE2CQ5TA81 110 aa5.53□□□□□ -1.52
RFFL-208ENST00000581039 Q8NDZ9 215 aa5.53□□□□□ -1.52
RFFL-208ENST00000581039 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
RFFL-208ENST00000581039 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
RFFL-208ENST00000581039 XP32Q5T750 250 aa5.52□□□□□ -1.53
RFFL-208ENST00000581039 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
RFFL-208ENST00000581039 SLC25A20O43772 301 aa5.51□□□□□ -1.53
RFFL-208ENST00000581039 CFC1BP0CG36 223 aa5.51□□□□□ -1.53
RFFL-208ENST00000581039 IGLC3P0DOY3 106 aa5.5□□□□□ -1.53
RFFL-208ENST00000581039 NDUFA6P56556 154 aa5.5□□□□□ -1.53
RFFL-208ENST00000581039 LINC00158P58513 81 aa5.5□□□□□ -1.53
RFFL-208ENST00000581039 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
RFFL-208ENST00000581039 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
RFFL-208ENST00000581039 SFTA2Q6UW10 78 aa5.5□□□□□ -1.53
RFFL-208ENST00000581039 Q8N377 158 aa5.5□□□□□ -1.53
RFFL-208ENST00000581039 IGLV9-49A0A0B4J1Y8 123 aa5.49□□□□□ -1.53
RFFL-208ENST00000581039 LINC01546A6NGU7 62 aa5.49□□□□□ -1.53
RFFL-208ENST00000581039 PRYO14603 147 aa5.49□□□□□ -1.53
RFFL-208ENST00000581039 MT1HP80294 61 aa5.49□□□□□ -1.53
RFFL-208ENST00000581039 LINC00483Q53H64 154 aa5.49□□□□□ -1.53
RFFL-208ENST00000581039 SSBP3-AS1Q7Z2R9 100 aa5.49□□□□□ -1.53
RFFL-208ENST00000581039 ETDCA0A1B0GVM5 59 aa5.48□□□□□ -1.53
RFFL-208ENST00000581039 ZNF22P17026 224 aaPredicted RBP5.48□□□□□ -1.53
RFFL-208ENST00000581039 MOBPQ13875 183 aa5.48□□□□□ -1.53
RFFL-208ENST00000581039 FA2HQ7L5A8 372 aa5.48□□□□□ -1.53
RFFL-208ENST00000581039 A0A0U1RRA0 63 aa5.47□□□□□ -1.53
RFFL-208ENST00000581039 ATP6V1G1O75348 118 aa5.47□□□□□ -1.53
RFFL-208ENST00000581039 SPRR1AP35321 89 aa5.47□□□□□ -1.53
RFFL-208ENST00000581039 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
RFFL-208ENST00000581039 KCNQ1DNQ9H478 68 aa5.47□□□□□ -1.53
RFFL-208ENST00000581039 SMCO4Q9NRQ5 59 aa5.47□□□□□ -1.53
RFFL-208ENST00000581039 BOD1L2Q8IYS8 172 aa5.46□□□□□ -1.54
RFFL-208ENST00000581039 IGLV8-61A0A075B6I0 122 aa5.45□□□□□ -1.54
RFFL-208ENST00000581039 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
RFFL-208ENST00000581039 NCR3O14931 201 aa5.45□□□□□ -1.54
RFFL-208ENST00000581039 S100A12P80511 92 aa5.45□□□□□ -1.54
RFFL-208ENST00000581039 PCOTHQ58A44 107 aa5.45□□□□□ -1.54
RFFL-208ENST00000581039 TMEM170BQ5T4T1 132 aa5.45□□□□□ -1.54
RFFL-208ENST00000581039 LORP23490 312 aaPredicted RBP5.44□□□□□ -1.54
RFFL-208ENST00000581039 TRAV9-1A0A075B6T8 112 aa5.43□□□□□ -1.54
RFFL-208ENST00000581039 TRBV10-3A0A0K0K1G6 114 aa5.43□□□□□ -1.54
RFFL-208ENST00000581039 C11orf86A6NJI1 115 aa5.43□□□□□ -1.54
RFFL-208ENST00000581039 ERC2-IT1O76042 136 aa5.43□□□□□ -1.54
RFFL-208ENST00000581039 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
RFFL-208ENST00000581039 BAGE3Q86Y29 109 aa5.43□□□□□ -1.54
RFFL-208ENST00000581039 B5MCH6 92 aa5.42□□□□□ -1.54
RFFL-208ENST00000581039 M0R2T5 61 aa5.42□□□□□ -1.54
RFFL-208ENST00000581039 SMIM13P0DJ93 91 aa5.42□□□□□ -1.54
RFFL-208ENST00000581039 C9orf153Q5TBE3 101 aa5.42□□□□□ -1.54
RFFL-208ENST00000581039 FABP9Q0Z7S8 132 aa5.41□□□□□ -1.54
RFFL-208ENST00000581039 MEIG1Q5JSS6 88 aa5.41□□□□□ -1.54
RFFL-208ENST00000581039 A0A096LNJ9 63 aa5.4□□□□□ -1.54
RFFL-208ENST00000581039 HBDP02042 147 aa5.4□□□□□ -1.54
RFFL-208ENST00000581039 S100PP25815 95 aa5.4□□□□□ -1.54
RFFL-208ENST00000581039 COX19Q49B96 90 aa5.4□□□□□ -1.54
RFFL-208ENST00000581039 MIR7-3HGQ8N6C7 128 aa5.4□□□□□ -1.54
RFFL-208ENST00000581039 C9orf92A6NGG3 77 aa5.39□□□□□ -1.55
RFFL-208ENST00000581039 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
RFFL-208ENST00000581039 LINC00614P0C842 121 aa5.39□□□□□ -1.55
RFFL-208ENST00000581039 Q9BRP9 147 aa5.39□□□□□ -1.55
RFFL-208ENST00000581039 CHTOPQ9Y3Y2 248 aaKnown RBP5.39□□□□□ -1.55
RFFL-208ENST00000581039 TMEM223A0PJW6 202 aa5.38□□□□□ -1.55
RFFL-208ENST00000581039 DDTP30046 118 aa5.38□□□□□ -1.55
RFFL-208ENST00000581039 HERV-K104P63124 156 aa5.38□□□□□ -1.55
RFFL-208ENST00000581039 PMCHL1Q16048 86 aa5.38□□□□□ -1.55
RFFL-208ENST00000581039 Q6ZRX8 168 aa5.38□□□□□ -1.55
RFFL-208ENST00000581039 JOSD1Q15040 202 aaPredicted RBP5.37□□□□□ -1.55
RFFL-208ENST00000581039 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
RFFL-208ENST00000581039 MAP1LC3CQ9BXW4 147 aa5.37□□□□□ -1.55
RFFL-208ENST00000581039 SEC11CQ9BY50 192 aa5.37□□□□□ -1.55
RFFL-208ENST00000581039 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
RFFL-208ENST00000581039 URB1-AS1Q96HZ7 61 aa5.36□□□□□ -1.55
RFFL-208ENST00000581039 TRBV10-2A0A0K0K1G8 114 aa5.35□□□□□ -1.55
RFFL-208ENST00000581039 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
RFFL-208ENST00000581039 HRCT1Q6UXD1 115 aa5.35□□□□□ -1.55
RFFL-208ENST00000581039 MYMXA0A1B0GTQ4 84 aa5.34□□□□□ -1.55
RFFL-208ENST00000581039 IGLV6-57P01721 117 aa5.34□□□□□ -1.55
RFFL-208ENST00000581039 S100A7L2Q5SY68 101 aa5.34□□□□□ -1.55
RFFL-208ENST00000581039 C18orf32Q8TCD1 76 aa5.34□□□□□ -1.55
RFFL-208ENST00000581039 TRAV12-1A0A0B4J245 112 aa5.33□□□□□ -1.56
RFFL-208ENST00000581039 LOC107984156A0A0G2JMH3 177 aa5.33□□□□□ -1.56
RFFL-208ENST00000581039 ARL17AQ8IVW1 177 aa5.33□□□□□ -1.56
RFFL-208ENST00000581039 ST20-AS1Q8NBB2 130 aa5.33□□□□□ -1.56
RFFL-208ENST00000581039 TMEM218A2RU14 115 aa5.32□□□□□ -1.56
RFFL-208ENST00000581039 C5orf52A6NGY3 159 aa5.32□□□□□ -1.56
RFFL-208ENST00000581039 SPANXB1Q9NS25 103 aaPredicted RBP5.32□□□□□ -1.56
RFFL-208ENST00000581039 TRAPPC1Q9Y5R8 145 aa5.32□□□□□ -1.56
RFFL-208ENST00000581039 TRAV23DV6A0A075B6W5 121 aa5.31□□□□□ -1.56
RFFL-208ENST00000581039 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
RFFL-208ENST00000581039 SLC25A34Q6PIV7 304 aa5.31□□□□□ -1.56
RFFL-208ENST00000581039 IFI27L1Q96BM0 104 aa5.31□□□□□ -1.56
RFFL-208ENST00000581039 MIEN1Q9BRT3 115 aa5.31□□□□□ -1.56
RFFL-208ENST00000581039 ZNF73O43830 326 aaPredicted RBP5.3□□□□□ -1.56
RFFL-208ENST00000581039 HINT1P49773 126 aaPredicted RBP5.3□□□□□ -1.56
RFFL-208ENST00000581039 UQCC3Q6UW78 93 aa5.3□□□□□ -1.56
RFFL-208ENST00000581039 LAMTOR3Q9UHA4 124 aa5.3□□□□□ -1.56
RFFL-208ENST00000581039 NDUFC2O95298 119 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 248.8 ms