RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 LOC107984156A0A0G2JMH3 177 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 LOC105371267A0A1B0GV96 52 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 ARL17AQ8IVW1 177 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 PLAC8Q9NZF1 115 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 FAM30AQ9NZY2 134 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
CCDC47-203ENST00000580986 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
CCDC47-203ENST00000580986 COX8AP10176 69 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 PFN2P35080 140 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 LINC00158P58513 81 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 GAGE2BQ13066 116 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 SPATA45Q537H7 98 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 Q6ZVH6 145 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 PCP2Q8IVA1 136 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 BOD1L2Q8IYS8 172 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 DNAH8Q96JB1 4490 aa6.6□□□□□ -1.35
CCDC47-203ENST00000580986 IGKV2-24A0A0C4DH68 120 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 PANO1I0J062 215 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 CHTF8P0CG12 524 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 S100A12P80511 92 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 C9orf129Q5T035 196 aaKnown RBP6.59□□□□□ -1.35
CCDC47-203ENST00000580986 LITAFQ99732 161 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 TTTY13Q9BZ97 58 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 SND1-IT1Q9HBX3 110 aa6.59□□□□□ -1.35
CCDC47-203ENST00000580986 A0A087WYN8 130 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 GAGE2EQ4V326 116 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 SCXQ7RTU7 201 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 MIR7-3HGQ8N6C7 128 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 SPANXDQ9BXN6 97 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 SPANXCQ9NY87 97 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 TP73-AS1Q9UF72 201 aa6.58□□□□□ -1.36
CCDC47-203ENST00000580986 IGLV5-37A0A075B6J1 123 aa6.57□□□□□ -1.36
CCDC47-203ENST00000580986 XGP55808 180 aa6.57□□□□□ -1.36
CCDC47-203ENST00000580986 COPS9Q8WXC6 57 aa6.57□□□□□ -1.36
CCDC47-203ENST00000580986 XAGE1AQ9HD64 81 aa6.57□□□□□ -1.36
CCDC47-203ENST00000580986 SPANXB1Q9NS25 103 aaPredicted RBP6.57□□□□□ -1.36
CCDC47-203ENST00000580986 APOBP04114 4563 aaKnown RBP6.57□□□□□ -1.36
CCDC47-203ENST00000580986 SLC25A34Q6PIV7 304 aa6.56□□□□□ -1.36
CCDC47-203ENST00000580986 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
CCDC47-203ENST00000580986 HIGD1BQ9P298 99 aa6.56□□□□□ -1.36
CCDC47-203ENST00000580986 A0A1W2PNN7 141 aa6.55□□□□□ -1.36
CCDC47-203ENST00000580986 NDUFC2O95298 119 aa6.55□□□□□ -1.36
CCDC47-203ENST00000580986 IFITM1P13164 125 aa6.55□□□□□ -1.36
CCDC47-203ENST00000580986 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
CCDC47-203ENST00000580986 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
CCDC47-203ENST00000580986 MIEN1Q9BRT3 115 aa6.55□□□□□ -1.36
CCDC47-203ENST00000580986 A0A0U1RRA0 63 aa6.54□□□□□ -1.36
CCDC47-203ENST00000580986 VPREB1P12018 145 aa6.54□□□□□ -1.36
CCDC47-203ENST00000580986 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
CCDC47-203ENST00000580986 DPH3Q96FX2 82 aa6.54□□□□□ -1.36
CCDC47-203ENST00000580986 C14orf144Q96I85 54 aa6.54□□□□□ -1.36
CCDC47-203ENST00000580986 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
CCDC47-203ENST00000580986 TRBV10-2A0A0K0K1G8 114 aa6.52□□□□□ -1.37
CCDC47-203ENST00000580986 FAM168BA1KXE4 195 aa6.52□□□□□ -1.37
CCDC47-203ENST00000580986 M0QXV9 152 aa6.52□□□□□ -1.37
CCDC47-203ENST00000580986 LBHQ53QV2 105 aaPredicted RBP6.52□□□□□ -1.37
CCDC47-203ENST00000580986 SERTAD4-AS1Q5TG53 156 aa6.52□□□□□ -1.37
CCDC47-203ENST00000580986 SOSTDC1Q6X4U4 206 aa6.52□□□□□ -1.37
CCDC47-203ENST00000580986 DAND5Q8N907 189 aa6.52□□□□□ -1.37
CCDC47-203ENST00000580986 HSPG2P98160 4391 aa6.51□□□□□ -1.37
CCDC47-203ENST00000580986 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
CCDC47-203ENST00000580986 FAM19A5Q7Z5A7 132 aaPredicted RBP6.51□□□□□ -1.37
CCDC47-203ENST00000580986 MRPL55Q7Z7F7 128 aaKnown RBP6.51□□□□□ -1.37
CCDC47-203ENST00000580986 NKAPP1Q8N9T2 125 aa6.51□□□□□ -1.37
CCDC47-203ENST00000580986 C7orf33Q8WU49 177 aa6.51□□□□□ -1.37
CCDC47-203ENST00000580986 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
CCDC47-203ENST00000580986 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
CCDC47-203ENST00000580986 H3BS24 57 aa6.5□□□□□ -1.37
CCDC47-203ENST00000580986 SRSF9Q13242 221 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCDC47-203ENST00000580986 TAL2Q16559 108 aa6.5□□□□□ -1.37
CCDC47-203ENST00000580986 C12orf57Q99622 126 aa6.5□□□□□ -1.37
CCDC47-203ENST00000580986 M0R378 163 aa6.49□□□□□ -1.37
CCDC47-203ENST00000580986 LINC00518Q8N0U6 118 aa6.49□□□□□ -1.37
CCDC47-203ENST00000580986 Q8NDZ9 215 aa6.49□□□□□ -1.37
CCDC47-203ENST00000580986 HAMPP81172 84 aa6.48□□□□□ -1.37
CCDC47-203ENST00000580986 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
CCDC47-203ENST00000580986 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
CCDC47-203ENST00000580986 MUSTN1Q8IVN3 82 aa6.47□□□□□ -1.37
CCDC47-203ENST00000580986 Q8N1X5 172 aa6.47□□□□□ -1.37
CCDC47-203ENST00000580986 LINC00167Q96N53 147 aa6.47□□□□□ -1.37
CCDC47-203ENST00000580986 HIST1H4GQ99525 98 aa6.47□□□□□ -1.37
CCDC47-203ENST00000580986 CBY1Q9Y3M2 126 aa6.47□□□□□ -1.37
CCDC47-203ENST00000580986 KIAA1109Q2LD37 5005 aa6.47□□□□□ -1.37
CCDC47-203ENST00000580986 IGLV1-50A0A075B6I6 118 aa6.46□□□□□ -1.38
CCDC47-203ENST00000580986 TSTD3H0UI37 97 aa6.46□□□□□ -1.38
CCDC47-203ENST00000580986 NPC2P61916 151 aa6.46□□□□□ -1.38
CCDC47-203ENST00000580986 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
CCDC47-203ENST00000580986 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
CCDC47-203ENST00000580986 IGLV6-57P01721 117 aa6.45□□□□□ -1.38
CCDC47-203ENST00000580986 UBE2BP63146 152 aa6.45□□□□□ -1.38
CCDC47-203ENST00000580986 HSD52Q0P140 79 aa6.45□□□□□ -1.38
CCDC47-203ENST00000580986 RYR1P21817 5038 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms