RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 TMEM223A0PJW6 202 aa12.52□□□□□ -0.41
CSNK1D-215ENST00000580784 PRLHP81277 87 aa12.52□□□□□ -0.41
CSNK1D-215ENST00000580784 TMEM126AQ9H061 195 aa12.52□□□□□ -0.41
CSNK1D-215ENST00000580784 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
CSNK1D-215ENST00000580784 LINC00158P58513 81 aa12.51□□□□□ -0.41
CSNK1D-215ENST00000580784 A0A0U1RRA0 63 aa12.5□□□□□ -0.41
CSNK1D-215ENST00000580784 FAM19A1Q7Z5A9 133 aa12.5□□□□□ -0.41
CSNK1D-215ENST00000580784 KRTAP13-2Q52LG2 175 aa12.49□□□□□ -0.41
CSNK1D-215ENST00000580784 M0R378 163 aa12.48□□□□□ -0.41
CSNK1D-215ENST00000580784 CBLN2Q8IUK8 224 aa12.48□□□□□ -0.41
CSNK1D-215ENST00000580784 FAM19A2Q8N3H0 131 aa12.48□□□□□ -0.41
CSNK1D-215ENST00000580784 FAM229BQ4G0N7 80 aa12.46□□□□□ -0.41
CSNK1D-215ENST00000580784 HSBP1O75506 76 aa12.45□□□□□ -0.42
CSNK1D-215ENST00000580784 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
CSNK1D-215ENST00000580784 TRGC2P03986 189 aa12.42□□□□□ -0.42
CSNK1D-215ENST00000580784 PLEKHB2Q96CS7 222 aa12.42□□□□□ -0.42
CSNK1D-215ENST00000580784 H0Y8G0 127 aa12.41□□□□□ -0.42
CSNK1D-215ENST00000580784 ATP6V1G1O75348 118 aa12.41□□□□□ -0.42
CSNK1D-215ENST00000580784 IGKV2D-26A0A0A0MRZ7 120 aa12.4□□□□□ -0.42
CSNK1D-215ENST00000580784 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
CSNK1D-215ENST00000580784 BOD1L2Q8IYS8 172 aa12.39□□□□□ -0.43
CSNK1D-215ENST00000580784 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
CSNK1D-215ENST00000580784 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
CSNK1D-215ENST00000580784 HIGD2AQ9BW72 106 aa12.39□□□□□ -0.43
CSNK1D-215ENST00000580784 HERV-K104P63124 156 aa12.38□□□□□ -0.43
CSNK1D-215ENST00000580784 NDUFA12Q9UI09 145 aa12.38□□□□□ -0.43
CSNK1D-215ENST00000580784 LINC00310P59036 64 aa12.37□□□□□ -0.43
CSNK1D-215ENST00000580784 SERF1AO75920 110 aa12.36□□□□□ -0.43
CSNK1D-215ENST00000580784 LEPROTL1O95214 131 aa12.36□□□□□ -0.43
CSNK1D-215ENST00000580784 NCR3O14931 201 aa12.35□□□□□ -0.43
CSNK1D-215ENST00000580784 RETNLBQ9BQ08 111 aa12.35□□□□□ -0.43
CSNK1D-215ENST00000580784 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
CSNK1D-215ENST00000580784 C3orf22Q8N5N4 141 aa12.34□□□□□ -0.43
CSNK1D-215ENST00000580784 MUC2Q02817 5179 aa12.34□□□□□ -0.43
CSNK1D-215ENST00000580784 LINC00587B1AMM8 73 aa12.33□□□□□ -0.44
CSNK1D-215ENST00000580784 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
CSNK1D-215ENST00000580784 SLC7A5P1Q8MH63 180 aa12.32□□□□□ -0.44
CSNK1D-215ENST00000580784 PRYO14603 147 aa12.31□□□□□ -0.44
CSNK1D-215ENST00000580784 LEPROTO15243 131 aa12.31□□□□□ -0.44
CSNK1D-215ENST00000580784 FABP4P15090 132 aa12.31□□□□□ -0.44
CSNK1D-215ENST00000580784 SPRR4Q96PI1 79 aa12.31□□□□□ -0.44
CSNK1D-215ENST00000580784 MAP1LC3CQ9BXW4 147 aa12.31□□□□□ -0.44
CSNK1D-215ENST00000580784 KCNQ1DNQ9H478 68 aa12.31□□□□□ -0.44
CSNK1D-215ENST00000580784 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
CSNK1D-215ENST00000580784 PLNP26678 52 aa12.29□□□□□ -0.44
CSNK1D-215ENST00000580784 SPRR1AP35321 89 aa12.29□□□□□ -0.44
CSNK1D-215ENST00000580784 LINC00337Q8N6G1 96 aa12.29□□□□□ -0.44
CSNK1D-215ENST00000580784 DAND5Q8N907 189 aa12.29□□□□□ -0.44
CSNK1D-215ENST00000580784 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
CSNK1D-215ENST00000580784 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
CSNK1D-215ENST00000580784 COLCA2A8K830 154 aa12.27□□□□□ -0.45
CSNK1D-215ENST00000580784 KRTAP4-16G5E9R7 235 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-215ENST00000580784 J3QQQ9 107 aa12.26□□□□□ -0.45
CSNK1D-215ENST00000580784 DPM2O94777 84 aa12.26□□□□□ -0.45
CSNK1D-215ENST00000580784 SMCR5Q8TEV8 140 aa12.26□□□□□ -0.45
CSNK1D-215ENST00000580784 LOC107984156A0A0G2JMH3 177 aa12.25□□□□□ -0.45
CSNK1D-215ENST00000580784 ETDCA0A1B0GVM5 59 aa12.25□□□□□ -0.45
CSNK1D-215ENST00000580784 ARL17AQ8IVW1 177 aa12.25□□□□□ -0.45
CSNK1D-215ENST00000580784 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-215ENST00000580784 IGKCP01834 107 aa12.24□□□□□ -0.45
CSNK1D-215ENST00000580784 CTAG1AP78358 180 aa12.24□□□□□ -0.45
CSNK1D-215ENST00000580784 HERVK_113P61574 105 aa12.23□□□□□ -0.45
CSNK1D-215ENST00000580784 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
CSNK1D-215ENST00000580784 IGLV7-46A0A075B6I9 117 aa12.21□□□□□ -0.45
CSNK1D-215ENST00000580784 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.45
CSNK1D-215ENST00000580784 NMUP48645 174 aa12.21□□□□□ -0.45
CSNK1D-215ENST00000580784 DDTP30046 118 aa12.2□□□□□ -0.46
CSNK1D-215ENST00000580784 S100A12P80511 92 aa12.2□□□□□ -0.46
CSNK1D-215ENST00000580784 SPAG11AQ6PDA7 123 aa12.2□□□□□ -0.46
CSNK1D-215ENST00000580784 TRBV10-2A0A0K0K1G8 114 aa12.19□□□□□ -0.46
CSNK1D-215ENST00000580784 B5MCH6 92 aa12.19□□□□□ -0.46
CSNK1D-215ENST00000580784 TPRXLQ17RH7 258 aa12.17□□□□□ -0.46
CSNK1D-215ENST00000580784 C4orf48Q5BLP8 95 aa12.17□□□□□ -0.46
CSNK1D-215ENST00000580784 Q8NBF4 154 aa12.17□□□□□ -0.46
CSNK1D-215ENST00000580784 MIEN1Q9BRT3 115 aa12.17□□□□□ -0.46
CSNK1D-215ENST00000580784 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
CSNK1D-215ENST00000580784 CDIP1Q9H305 208 aa12.16□□□□□ -0.46
CSNK1D-215ENST00000580784 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-215ENST00000580784 EIF4EBP3O60516 100 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-215ENST00000580784 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
CSNK1D-215ENST00000580784 ADAMTSL4-AS1Q5T5F5 129 aa12.15□□□□□ -0.46
CSNK1D-215ENST00000580784 GAGE2AQ6NT46 116 aa12.15□□□□□ -0.46
CSNK1D-215ENST00000580784 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
CSNK1D-215ENST00000580784 NDUFC2O95298 119 aa12.14□□□□□ -0.47
CSNK1D-215ENST00000580784 NPC2P61916 151 aa12.14□□□□□ -0.47
CSNK1D-215ENST00000580784 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
CSNK1D-215ENST00000580784 E9PLD3 99 aa12.13□□□□□ -0.47
CSNK1D-215ENST00000580784 IGLV6-57P01721 117 aa12.13□□□□□ -0.47
CSNK1D-215ENST00000580784 S100A7L2Q5SY68 101 aa12.13□□□□□ -0.47
CSNK1D-215ENST00000580784 Q9BRP9 147 aa12.13□□□□□ -0.47
CSNK1D-215ENST00000580784 MUC17Q685J3 4493 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 SYS1-DBNDD2H3BUS1 97 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
CSNK1D-215ENST00000580784 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms