RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 NMUP48645 174 aa12.07□□□□□ -0.48
LIMD2-209ENST00000580222 PTTG1IPP53801 180 aa12.07□□□□□ -0.48
LIMD2-209ENST00000580222 HERV-K104P63124 156 aa12.07□□□□□ -0.48
LIMD2-209ENST00000580222 ANKRD39Q53RE8 183 aa12.07□□□□□ -0.48
LIMD2-209ENST00000580222 MAJINQ3KP22 176 aa12.06□□□□□ -0.48
LIMD2-209ENST00000580222 GAGE2EQ4V326 116 aa12.06□□□□□ -0.48
LIMD2-209ENST00000580222 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
LIMD2-209ENST00000580222 Q6ZRP5 223 aa12.06□□□□□ -0.48
LIMD2-209ENST00000580222 GAGE2DQ9UEU5 116 aa12.06□□□□□ -0.48
LIMD2-209ENST00000580222 ERG28Q9UKR5 140 aa12.06□□□□□ -0.48
LIMD2-209ENST00000580222 IGKV2D-26A0A0A0MRZ7 120 aa12.05□□□□□ -0.48
LIMD2-209ENST00000580222 PFN2P35080 140 aa12.05□□□□□ -0.48
LIMD2-209ENST00000580222 SPACA4Q8TDM5 124 aa12.05□□□□□ -0.48
LIMD2-209ENST00000580222 DPH3Q96FX2 82 aa12.05□□□□□ -0.48
LIMD2-209ENST00000580222 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
LIMD2-209ENST00000580222 JOSD1Q15040 202 aaPredicted RBP12.04□□□□□ -0.48
LIMD2-209ENST00000580222 A0A0U1RRA0 63 aa12.01□□□□□ -0.49
LIMD2-209ENST00000580222 ZNF815PA8K554 130 aa12.01□□□□□ -0.49
LIMD2-209ENST00000580222 LINC00158P58513 81 aa12.01□□□□□ -0.49
LIMD2-209ENST00000580222 COX17Q14061 63 aa12.01□□□□□ -0.49
LIMD2-209ENST00000580222 PLAC8Q9NZF1 115 aa12.01□□□□□ -0.49
LIMD2-209ENST00000580222 LINC00587B1AMM8 73 aa12□□□□□ -0.49
LIMD2-209ENST00000580222 TTTY13Q9BZ97 58 aa12□□□□□ -0.49
LIMD2-209ENST00000580222 SMIM13P0DJ93 91 aa11.99□□□□□ -0.49
LIMD2-209ENST00000580222 PRR3P79522 188 aaKnown RBP11.99□□□□□ -0.49
LIMD2-209ENST00000580222 XAGE1AQ9HD64 81 aa11.99□□□□□ -0.49
LIMD2-209ENST00000580222 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
LIMD2-209ENST00000580222 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
LIMD2-209ENST00000580222 C9orf129Q5T035 196 aaKnown RBP11.97□□□□□ -0.49
LIMD2-209ENST00000580222 VAMP8Q9BV40 100 aa11.96□□□□□ -0.49
LIMD2-209ENST00000580222 PCP2Q8IVA1 136 aa11.95□□□□□ -0.5
LIMD2-209ENST00000580222 MIR7-3HGQ8N6C7 128 aa11.95□□□□□ -0.5
LIMD2-209ENST00000580222 C7orf33Q8WU49 177 aa11.95□□□□□ -0.5
LIMD2-209ENST00000580222 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
LIMD2-209ENST00000580222 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
LIMD2-209ENST00000580222 SND1-IT1Q9HBX3 110 aa11.94□□□□□ -0.5
LIMD2-209ENST00000580222 PAM16Q9Y3D7 125 aa11.94□□□□□ -0.5
LIMD2-209ENST00000580222 A0A1W2PNN7 141 aa11.93□□□□□ -0.5
LIMD2-209ENST00000580222 FAM168BA1KXE4 195 aa11.93□□□□□ -0.5
LIMD2-209ENST00000580222 SPATA45Q537H7 98 aa11.93□□□□□ -0.5
LIMD2-209ENST00000580222 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
LIMD2-209ENST00000580222 DAND5Q8N907 189 aa11.92□□□□□ -0.5
LIMD2-209ENST00000580222 SPINK6Q6UWN8 80 aa11.9□□□□□ -0.5
LIMD2-209ENST00000580222 TIMM17BO60830 172 aa11.89□□□□□ -0.51
LIMD2-209ENST00000580222 REG3GQ6UW15 175 aa11.89□□□□□ -0.51
LIMD2-209ENST00000580222 M0QXV9 152 aa11.88□□□□□ -0.51
LIMD2-209ENST00000580222 MIEN1Q9BRT3 115 aa11.88□□□□□ -0.51
LIMD2-209ENST00000580222 TMEM238C9JI98 176 aa11.87□□□□□ -0.51
LIMD2-209ENST00000580222 COX8AP10176 69 aa11.87□□□□□ -0.51
LIMD2-209ENST00000580222 NPC2P61916 151 aa11.87□□□□□ -0.51
LIMD2-209ENST00000580222 LCE2AQ5TA79 106 aaPredicted RBP11.87□□□□□ -0.51
LIMD2-209ENST00000580222 LITAFQ99732 161 aa11.87□□□□□ -0.51
LIMD2-209ENST00000580222 ADAMTSL4-AS1Q5T5F5 129 aa11.86□□□□□ -0.51
LIMD2-209ENST00000580222 PHF5AQ7RTV0 110 aaKnown RBP11.86□□□□□ -0.51
LIMD2-209ENST00000580222 KRTAP7-1Q8IUC3 87 aa11.86□□□□□ -0.51
LIMD2-209ENST00000580222 LOC105371267A0A1B0GV96 52 aa11.85□□□□□ -0.51
LIMD2-209ENST00000580222 S100A12P80511 92 aa11.85□□□□□ -0.51
LIMD2-209ENST00000580222 RPL24P83731 157 aaKnown RBP11.85□□□□□ -0.51
LIMD2-209ENST00000580222 BOD1L2Q8IYS8 172 aa11.85□□□□□ -0.51
LIMD2-209ENST00000580222 NKAPP1Q8N9T2 125 aa11.85□□□□□ -0.51
LIMD2-209ENST00000580222 TP73-AS1Q9UF72 201 aa11.85□□□□□ -0.51
LIMD2-209ENST00000580222 C14orf144Q96I85 54 aa11.84□□□□□ -0.51
LIMD2-209ENST00000580222 VPREB1P12018 145 aa11.83□□□□□ -0.52
LIMD2-209ENST00000580222 SPANXDQ9BXN6 97 aa11.83□□□□□ -0.52
LIMD2-209ENST00000580222 SPANXCQ9NY87 97 aa11.83□□□□□ -0.52
LIMD2-209ENST00000580222 C22orf24Q9Y442 160 aa11.83□□□□□ -0.52
LIMD2-209ENST00000580222 IGLV5-37A0A075B6J1 123 aa11.82□□□□□ -0.52
LIMD2-209ENST00000580222 SLC25A34Q6PIV7 304 aa11.82□□□□□ -0.52
LIMD2-209ENST00000580222 DLEU1O43261 78 aa11.81□□□□□ -0.52
LIMD2-209ENST00000580222 SMIM6P0DI80 62 aa11.81□□□□□ -0.52
LIMD2-209ENST00000580222 UBE2BP63146 152 aa11.81□□□□□ -0.52
LIMD2-209ENST00000580222 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
LIMD2-209ENST00000580222 MRPL55Q7Z7F7 128 aaKnown RBP11.81□□□□□ -0.52
LIMD2-209ENST00000580222 Q8NDZ9 215 aa11.81□□□□□ -0.52
LIMD2-209ENST00000580222 LINC00308Q8TCZ7 52 aa11.81□□□□□ -0.52
LIMD2-209ENST00000580222 LOC107984156A0A0G2JMH3 177 aa11.8□□□□□ -0.52
LIMD2-209ENST00000580222 LBHQ53QV2 105 aaPredicted RBP11.8□□□□□ -0.52
LIMD2-209ENST00000580222 ARL17AQ8IVW1 177 aa11.8□□□□□ -0.52
LIMD2-209ENST00000580222 GAGE10A6NGK3 116 aa11.78□□□□□ -0.52
LIMD2-209ENST00000580222 NCR3O14931 201 aa11.78□□□□□ -0.52
LIMD2-209ENST00000580222 Q6ZVH6 145 aa11.78□□□□□ -0.52
LIMD2-209ENST00000580222 COPS9Q8WXC6 57 aa11.78□□□□□ -0.52
LIMD2-209ENST00000580222 SPANXB1Q9NS25 103 aaPredicted RBP11.78□□□□□ -0.52
LIMD2-209ENST00000580222 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
LIMD2-209ENST00000580222 IFITM1P13164 125 aa11.76□□□□□ -0.53
LIMD2-209ENST00000580222 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
LIMD2-209ENST00000580222 NDUFC2O95298 119 aa11.75□□□□□ -0.53
LIMD2-209ENST00000580222 M0R378 163 aa11.74□□□□□ -0.53
LIMD2-209ENST00000580222 MUSTN1Q8IVN3 82 aa11.74□□□□□ -0.53
LIMD2-209ENST00000580222 RPL37AP8A6NKH3 93 aa11.73□□□□□ -0.53
LIMD2-209ENST00000580222 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
LIMD2-209ENST00000580222 IGKV2-28A0A075B6P5 120 aa11.72□□□□□ -0.53
LIMD2-209ENST00000580222 IGKV2D-28P01615 120 aa11.72□□□□□ -0.53
LIMD2-209ENST00000580222 KRTAP11-1Q8IUC1 163 aa11.72□□□□□ -0.53
LIMD2-209ENST00000580222 HIGD1BQ9P298 99 aa11.72□□□□□ -0.53
LIMD2-209ENST00000580222 TRBV10-2A0A0K0K1G8 114 aa11.71□□□□□ -0.53
LIMD2-209ENST00000580222 A0A0U1RQV1 116 aa11.71□□□□□ -0.53
LIMD2-209ENST00000580222 C2orf91Q6ZV80 131 aa11.71□□□□□ -0.53
LIMD2-209ENST00000580222 PRR26Q8N8Z3 221 aa11.71□□□□□ -0.53
LIMD2-209ENST00000580222 PPDPFQ9H3Y8 114 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms