RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 C12orf57Q99622 126 aa5.7□□□□□ -1.5
SMARCD2-208ENST00000580054 PKIGQ9Y2B9 76 aa5.7□□□□□ -1.5
SMARCD2-208ENST00000580054 NDUFA1O15239 70 aa5.69□□□□□ -1.5
SMARCD2-208ENST00000580054 LINC00526Q96FQ7 95 aa5.69□□□□□ -1.5
SMARCD2-208ENST00000580054 CAMK2N2Q96S95 79 aa5.69□□□□□ -1.5
SMARCD2-208ENST00000580054 LINC00474Q9P2X8 69 aa5.69□□□□□ -1.5
SMARCD2-208ENST00000580054 NDUFA12Q9UI09 145 aa5.69□□□□□ -1.5
SMARCD2-208ENST00000580054 ZNF815PA8K554 130 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 TSTD3H0UI37 97 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 ANKRD39Q53RE8 183 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 SCGB1D4Q6XE38 83 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 Q6ZRP5 223 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
SMARCD2-208ENST00000580054 COX8AP10176 69 aa5.67□□□□□ -1.5
SMARCD2-208ENST00000580054 SYCNQ0VAF6 134 aa5.67□□□□□ -1.5
SMARCD2-208ENST00000580054 PRR4Q16378 134 aa5.67□□□□□ -1.5
SMARCD2-208ENST00000580054 MEIG1Q5JSS6 88 aa5.67□□□□□ -1.5
SMARCD2-208ENST00000580054 LINC00518Q8N0U6 118 aa5.67□□□□□ -1.5
SMARCD2-208ENST00000580054 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
SMARCD2-208ENST00000580054 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
SMARCD2-208ENST00000580054 DLEU1O43261 78 aa5.66□□□□□ -1.5
SMARCD2-208ENST00000580054 COPS9Q8WXC6 57 aa5.66□□□□□ -1.5
SMARCD2-208ENST00000580054 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
SMARCD2-208ENST00000580054 IGKV2D-26A0A0A0MRZ7 120 aa5.65□□□□□ -1.5
SMARCD2-208ENST00000580054 COX17Q14061 63 aa5.65□□□□□ -1.5
SMARCD2-208ENST00000580054 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
SMARCD2-208ENST00000580054 RNF151Q2KHN1 245 aa5.65□□□□□ -1.5
SMARCD2-208ENST00000580054 C14orf144Q96I85 54 aa5.65□□□□□ -1.5
SMARCD2-208ENST00000580054 PSORS1C2Q9UIG4 136 aa5.65□□□□□ -1.5
SMARCD2-208ENST00000580054 LOC107984640A0A0U1RRK4 108 aa5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 TMEM238C9JI98 176 aa5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 PTTG1IPP53801 180 aa5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 LINC00158P58513 81 aa5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 GAGE2BQ13066 116 aa5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 PCP2Q8IVA1 136 aa5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 BOD1L2Q8IYS8 172 aa5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 ZNF625Q96I27 306 aaPredicted RBP5.64□□□□□ -1.51
SMARCD2-208ENST00000580054 TIMM17BO60830 172 aa5.63□□□□□ -1.51
SMARCD2-208ENST00000580054 TSPEAR-AS2P59090 65 aa5.63□□□□□ -1.51
SMARCD2-208ENST00000580054 C2orf82Q6UX34 121 aa5.63□□□□□ -1.51
SMARCD2-208ENST00000580054 UNQ6190/PRO20217Q6UXQ8 127 aa5.63□□□□□ -1.51
SMARCD2-208ENST00000580054 Q6ZVH6 145 aa5.63□□□□□ -1.51
SMARCD2-208ENST00000580054 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
SMARCD2-208ENST00000580054 ERG28Q9UKR5 140 aa5.63□□□□□ -1.51
SMARCD2-208ENST00000580054 A0A0J9YXY3 114 aa5.62□□□□□ -1.51
SMARCD2-208ENST00000580054 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
SMARCD2-208ENST00000580054 PFN2P35080 140 aa5.62□□□□□ -1.51
SMARCD2-208ENST00000580054 PRO1933Q9H354 126 aa5.62□□□□□ -1.51
SMARCD2-208ENST00000580054 HIGD1BQ9P298 99 aa5.62□□□□□ -1.51
SMARCD2-208ENST00000580054 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
SMARCD2-208ENST00000580054 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
SMARCD2-208ENST00000580054 TTTY13Q9BZ97 58 aa5.61□□□□□ -1.51
SMARCD2-208ENST00000580054 NDUFC2-KCTD14E9PQ53 114 aa5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 SMIM13P0DJ93 91 aa5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 IFITM1P13164 125 aa5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 RPL18AQ02543 176 aaKnown RBP5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 TAL2Q16559 108 aa5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 C9orf116Q5BN46 136 aaPredicted RBP5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 PHF5AQ7RTV0 110 aaKnown RBP5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 HIST1H4GQ99525 98 aa5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 SPANXB1Q9NS25 103 aaPredicted RBP5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 C6orf48Q9UBA6 75 aa5.6□□□□□ -1.51
SMARCD2-208ENST00000580054 A0A0U1RRA0 63 aa5.59□□□□□ -1.51
SMARCD2-208ENST00000580054 TLX1NBP0CAT3 122 aa5.59□□□□□ -1.51
SMARCD2-208ENST00000580054 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
SMARCD2-208ENST00000580054 SPANXDQ9BXN6 97 aa5.59□□□□□ -1.51
SMARCD2-208ENST00000580054 SPANXCQ9NY87 97 aa5.59□□□□□ -1.51
SMARCD2-208ENST00000580054 TMEM238LA0A1B0GVL6 79 aa5.58□□□□□ -1.52
SMARCD2-208ENST00000580054 A6NJY4 79 aa5.58□□□□□ -1.52
SMARCD2-208ENST00000580054 RPL24P83731 157 aaKnown RBP5.58□□□□□ -1.52
SMARCD2-208ENST00000580054 MIR7-3HGQ8N6C7 128 aa5.58□□□□□ -1.52
SMARCD2-208ENST00000580054 M0R143 59 aa5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 IGLV7-43P04211 117 aa5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 KRTAP1-4P0C5Y4 121 aa5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 HSD52Q0P140 79 aa5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 GAGE2EQ4V326 116 aa5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 DIRC1Q969H9 104 aa5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 GAGE2DQ9UEU5 116 aa5.57□□□□□ -1.52
SMARCD2-208ENST00000580054 DDTP30046 118 aa5.56□□□□□ -1.52
SMARCD2-208ENST00000580054 PPDPFQ9H3Y8 114 aa5.56□□□□□ -1.52
SMARCD2-208ENST00000580054 TP73-AS1Q9UF72 201 aa5.56□□□□□ -1.52
SMARCD2-208ENST00000580054 IGLV1-50A0A075B6I6 118 aa5.55□□□□□ -1.52
SMARCD2-208ENST00000580054 H0Y9J4 135 aa5.55□□□□□ -1.52
SMARCD2-208ENST00000580054 C2orf91Q6ZV80 131 aa5.55□□□□□ -1.52
SMARCD2-208ENST00000580054 LINC00308Q8TCZ7 52 aa5.55□□□□□ -1.52
SMARCD2-208ENST00000580054 SND1-IT1Q9HBX3 110 aa5.55□□□□□ -1.52
SMARCD2-208ENST00000580054 FAM168BA1KXE4 195 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 CTAG1AP78358 180 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 ADAMTSL4-AS1Q5T5F5 129 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 MUSTN1Q8IVN3 82 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 CEND1Q8N111 149 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 DAND5Q8N907 189 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 LITAFQ99732 161 aa5.54□□□□□ -1.52
SMARCD2-208ENST00000580054 CBY1Q9Y3M2 126 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms