RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 DLEU1O43261 78 aa4.58□□□□□ -1.68
RNF43-204ENST00000580014 SMIM6P0DI80 62 aa4.58□□□□□ -1.68
RNF43-204ENST00000580014 LGALS3P17931 250 aaKnown RBP4.58□□□□□ -1.68
RNF43-204ENST00000580014 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.57□□□□□ -1.68
RNF43-204ENST00000580014 HSBP1L1C9JCN9 74 aa4.57□□□□□ -1.68
RNF43-204ENST00000580014 CIRBPQ14011 172 aaKnown RBP4.57□□□□□ -1.68
RNF43-204ENST00000580014 COX17Q14061 63 aa4.57□□□□□ -1.68
RNF43-204ENST00000580014 PCP2Q8IVA1 136 aa4.57□□□□□ -1.68
RNF43-204ENST00000580014 BOD1L2Q8IYS8 172 aa4.57□□□□□ -1.68
RNF43-204ENST00000580014 VAMP8Q9BV40 100 aa4.57□□□□□ -1.68
RNF43-204ENST00000580014 PKIGQ9Y2B9 76 aa4.57□□□□□ -1.68
RNF43-204ENST00000580014 A0A0J9YXY3 114 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 A4D1N5 150 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 LINC00587B1AMM8 73 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 EPM2AB3EWF7 344 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 NDUFC2-KCTD14E9PQ53 114 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 TIMM17BO60830 172 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 COX8AP10176 69 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 Q6ZSA8 131 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 LITAFQ99732 161 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 TTTY13Q9BZ97 58 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 ERG28Q9UKR5 140 aa4.56□□□□□ -1.68
RNF43-204ENST00000580014 RYR3Q15413 4870 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 DNAH11Q96DT5 4516 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 LOC107984156A0A0G2JMH3 177 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 LOC107984640A0A0U1RRK4 108 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 ZNF815PA8K554 130 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 SPATA45Q537H7 98 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 C9orf116Q5BN46 136 aaPredicted RBP4.55□□□□□ -1.68
RNF43-204ENST00000580014 ARL17AQ8IVW1 177 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 PPDPFQ9H3Y8 114 aa4.55□□□□□ -1.68
RNF43-204ENST00000580014 C16orf90A8MZG2 172 aa4.54□□□□□ -1.68
RNF43-204ENST00000580014 FUSP35637 526 aaKnown RBP eCLIP4.54□□□□□ -1.68
RNF43-204ENST00000580014 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
RNF43-204ENST00000580014 S100A12P80511 92 aa4.54□□□□□ -1.68
RNF43-204ENST00000580014 LBHQ53QV2 105 aaPredicted RBP4.54□□□□□ -1.68
RNF43-204ENST00000580014 Q6ZRP5 223 aa4.54□□□□□ -1.68
RNF43-204ENST00000580014 Q8N9P0 234 aaPredicted RBP4.54□□□□□ -1.68
RNF43-204ENST00000580014 PKD1P98161 4303 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 A0A096LNI7 61 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 SMIM13P0DJ93 91 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 LINC01620Q4KN68 170 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 ADAMTSL4-AS1Q5T5F5 129 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 SLC25A34Q6PIV7 304 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 LINC00518Q8N0U6 118 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 C14orf144Q96I85 54 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 HIGD1BQ9P298 99 aa4.53□□□□□ -1.68
RNF43-204ENST00000580014 PANO1I0J062 215 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 PFN2P35080 140 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 LINC00158P58513 81 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 C9orf129Q5T035 196 aaKnown RBP4.52□□□□□ -1.69
RNF43-204ENST00000580014 C2orf91Q6ZV80 131 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 Q6ZVH6 145 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 MIR7-3HGQ8N6C7 128 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 SPACA4Q8TDM5 124 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 SPANXDQ9BXN6 97 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 SND1-IT1Q9HBX3 110 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 SPANXB1Q9NS25 103 aaPredicted RBP4.52□□□□□ -1.69
RNF43-204ENST00000580014 SPANXCQ9NY87 97 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 LINC00474Q9P2X8 69 aa4.52□□□□□ -1.69
RNF43-204ENST00000580014 IFITM1P13164 125 aa4.51□□□□□ -1.69
RNF43-204ENST00000580014 MEIG1Q5JSS6 88 aa4.51□□□□□ -1.69
RNF43-204ENST00000580014 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
RNF43-204ENST00000580014 C12orf57Q99622 126 aa4.51□□□□□ -1.69
RNF43-204ENST00000580014 PLAC8Q9NZF1 115 aa4.51□□□□□ -1.69
RNF43-204ENST00000580014 HECTD4Q9Y4D8 3996 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 TMEM238C9JI98 176 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 CHTF8P0CG12 524 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 RPL18AQ02543 176 aaKnown RBP4.5□□□□□ -1.69
RNF43-204ENST00000580014 SOSTDC1Q6X4U4 206 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 SCGB1D4Q6XE38 83 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 LINC00308Q8TCZ7 52 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 UQCR10Q9UDW1 63 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 TP73-AS1Q9UF72 201 aa4.5□□□□□ -1.69
RNF43-204ENST00000580014 A0A0U1RRA0 63 aa4.49□□□□□ -1.69
RNF43-204ENST00000580014 A0A1W2PNN7 141 aa4.49□□□□□ -1.69
RNF43-204ENST00000580014 NDUFC2O95298 119 aa4.49□□□□□ -1.69
RNF43-204ENST00000580014 Q8NDZ9 215 aa4.49□□□□□ -1.69
RNF43-204ENST00000580014 MIEN1Q9BRT3 115 aa4.49□□□□□ -1.69
RNF43-204ENST00000580014 XAGE1AQ9HD64 81 aa4.49□□□□□ -1.69
RNF43-204ENST00000580014 A0A087WYN8 130 aa4.48□□□□□ -1.69
RNF43-204ENST00000580014 IGKV2-24A0A0C4DH68 120 aa4.48□□□□□ -1.69
RNF43-204ENST00000580014 CDK2AP2O75956 126 aa4.48□□□□□ -1.69
RNF43-204ENST00000580014 XGP55808 180 aa4.48□□□□□ -1.69
RNF43-204ENST00000580014 TAL2Q16559 108 aa4.48□□□□□ -1.69
RNF43-204ENST00000580014 DAND5Q8N907 189 aa4.48□□□□□ -1.69
RNF43-204ENST00000580014 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
RNF43-204ENST00000580014 TRBV10-2A0A0K0K1G8 114 aa4.47□□□□□ -1.69
RNF43-204ENST00000580014 FAM168BA1KXE4 195 aa4.47□□□□□ -1.69
RNF43-204ENST00000580014 SCXQ7RTU7 201 aa4.47□□□□□ -1.69
RNF43-204ENST00000580014 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
RNF43-204ENST00000580014 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
RNF43-204ENST00000580014 COPS9Q8WXC6 57 aa4.47□□□□□ -1.69
RNF43-204ENST00000580014 PRO1933Q9H354 126 aa4.47□□□□□ -1.69
RNF43-204ENST00000580014 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.69
RNF43-204ENST00000580014 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNF43-204ENST00000580014 C22orf24Q9Y442 160 aa4.46□□□□□ -1.7
RNF43-204ENST00000580014 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
RNF43-204ENST00000580014 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 IGKV2-28A0A075B6P5 120 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms