RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 LINC00518Q8N0U6 118 aa6.61□□□□□ -1.35
SNRPD1-203ENST00000579618 C6orf48Q9UBA6 75 aa6.61□□□□□ -1.35
SNRPD1-203ENST00000579618 ERG28Q9UKR5 140 aa6.61□□□□□ -1.35
SNRPD1-203ENST00000579618 A0A0J9YXY3 114 aa6.6□□□□□ -1.35
SNRPD1-203ENST00000579618 LOC107984640A0A0U1RRK4 108 aa6.6□□□□□ -1.35
SNRPD1-203ENST00000579618 NDUFC2-KCTD14E9PQ53 114 aa6.6□□□□□ -1.35
SNRPD1-203ENST00000579618 MEIG1Q5JSS6 88 aa6.6□□□□□ -1.35
SNRPD1-203ENST00000579618 SCGB1D4Q6XE38 83 aa6.6□□□□□ -1.35
SNRPD1-203ENST00000579618 Q6ZSA8 131 aa6.6□□□□□ -1.35
SNRPD1-203ENST00000579618 TNXBP22105 4242 aa6.59□□□□□ -1.35
SNRPD1-203ENST00000579618 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
SNRPD1-203ENST00000579618 Q6ZVH6 145 aa6.59□□□□□ -1.35
SNRPD1-203ENST00000579618 COPS9Q8WXC6 57 aa6.59□□□□□ -1.35
SNRPD1-203ENST00000579618 C14orf144Q96I85 54 aa6.59□□□□□ -1.35
SNRPD1-203ENST00000579618 TTTY13Q9BZ97 58 aa6.59□□□□□ -1.35
SNRPD1-203ENST00000579618 UQCR10Q9UDW1 63 aa6.59□□□□□ -1.35
SNRPD1-203ENST00000579618 TSTD3H0UI37 97 aa6.58□□□□□ -1.36
SNRPD1-203ENST00000579618 LINC00158P58513 81 aa6.58□□□□□ -1.36
SNRPD1-203ENST00000579618 HIGD1BQ9P298 99 aa6.58□□□□□ -1.36
SNRPD1-203ENST00000579618 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
SNRPD1-203ENST00000579618 SMIM13P0DJ93 91 aa6.57□□□□□ -1.36
SNRPD1-203ENST00000579618 PFN2P35080 140 aa6.57□□□□□ -1.36
SNRPD1-203ENST00000579618 C9orf116Q5BN46 136 aaPredicted RBP6.57□□□□□ -1.36
SNRPD1-203ENST00000579618 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
SNRPD1-203ENST00000579618 SPANXB1Q9NS25 103 aaPredicted RBP6.57□□□□□ -1.36
SNRPD1-203ENST00000579618 SDIM1Q6ZPB5 146 aa6.56□□□□□ -1.36
SNRPD1-203ENST00000579618 MIEN1Q9BRT3 115 aa6.56□□□□□ -1.36
SNRPD1-203ENST00000579618 SPANXDQ9BXN6 97 aa6.56□□□□□ -1.36
SNRPD1-203ENST00000579618 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
SNRPD1-203ENST00000579618 SPANXCQ9NY87 97 aa6.56□□□□□ -1.36
SNRPD1-203ENST00000579618 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 IFITM1P13164 125 aa6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 HNRNPA3P51991 378 aaKnown RBP6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 RPL18AQ02543 176 aaKnown RBP6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 Q6ZRP5 223 aa6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 LITAFQ99732 161 aa6.55□□□□□ -1.36
SNRPD1-203ENST00000579618 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
SNRPD1-203ENST00000579618 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
SNRPD1-203ENST00000579618 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
SNRPD1-203ENST00000579618 TAL2Q16559 108 aa6.53□□□□□ -1.36
SNRPD1-203ENST00000579618 LINC01620Q4KN68 170 aa6.53□□□□□ -1.36
SNRPD1-203ENST00000579618 ADAMTSL4-AS1Q5T5F5 129 aa6.53□□□□□ -1.36
SNRPD1-203ENST00000579618 PRO1933Q9H354 126 aa6.53□□□□□ -1.36
SNRPD1-203ENST00000579618 SND1-IT1Q9HBX3 110 aa6.53□□□□□ -1.36
SNRPD1-203ENST00000579618 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
SNRPD1-203ENST00000579618 GAGE2BQ13066 116 aa6.52□□□□□ -1.37
SNRPD1-203ENST00000579618 GAGE2EQ4V326 116 aa6.52□□□□□ -1.37
SNRPD1-203ENST00000579618 C2orf91Q6ZV80 131 aa6.52□□□□□ -1.37
SNRPD1-203ENST00000579618 HIST1H4GQ99525 98 aa6.52□□□□□ -1.37
SNRPD1-203ENST00000579618 GAGE2DQ9UEU5 116 aa6.52□□□□□ -1.37
SNRPD1-203ENST00000579618 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
SNRPD1-203ENST00000579618 A0A096LNI7 61 aa6.51□□□□□ -1.37
SNRPD1-203ENST00000579618 RPL24P83731 157 aaKnown RBP6.51□□□□□ -1.37
SNRPD1-203ENST00000579618 LINC00308Q8TCZ7 52 aa6.51□□□□□ -1.37
SNRPD1-203ENST00000579618 NDUFC2O95298 119 aa6.5□□□□□ -1.37
SNRPD1-203ENST00000579618 HSD52Q0P140 79 aa6.5□□□□□ -1.37
SNRPD1-203ENST00000579618 DAND5Q8N907 189 aa6.5□□□□□ -1.37
SNRPD1-203ENST00000579618 CIRBP-AS1Q8TBR5 109 aa6.5□□□□□ -1.37
SNRPD1-203ENST00000579618 SPACA4Q8TDM5 124 aa6.5□□□□□ -1.37
SNRPD1-203ENST00000579618 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
SNRPD1-203ENST00000579618 XAGE1AQ9HD64 81 aa6.5□□□□□ -1.37
SNRPD1-203ENST00000579618 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
SNRPD1-203ENST00000579618 C9orf129Q5T035 196 aaKnown RBP6.49□□□□□ -1.37
SNRPD1-203ENST00000579618 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
SNRPD1-203ENST00000579618 A6NJY4 79 aa6.48□□□□□ -1.37
SNRPD1-203ENST00000579618 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
SNRPD1-203ENST00000579618 DPH3Q96FX2 82 aa6.48□□□□□ -1.37
SNRPD1-203ENST00000579618 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
SNRPD1-203ENST00000579618 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
SNRPD1-203ENST00000579618 DDTP30046 118 aa6.47□□□□□ -1.37
SNRPD1-203ENST00000579618 RPL37AP61513 92 aaKnown RBP6.47□□□□□ -1.37
SNRPD1-203ENST00000579618 SOSTDC1Q6X4U4 206 aa6.47□□□□□ -1.37
SNRPD1-203ENST00000579618 CEND1Q8N111 149 aa6.47□□□□□ -1.37
SNRPD1-203ENST00000579618 M0R143 59 aa6.46□□□□□ -1.38
SNRPD1-203ENST00000579618 CHTF8P0CG12 524 aa6.46□□□□□ -1.38
SNRPD1-203ENST00000579618 NPC2P61916 151 aa6.46□□□□□ -1.38
SNRPD1-203ENST00000579618 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.38
SNRPD1-203ENST00000579618 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
SNRPD1-203ENST00000579618 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
SNRPD1-203ENST00000579618 A0A087WYN8 130 aa6.45□□□□□ -1.38
SNRPD1-203ENST00000579618 VPREB1P12018 145 aa6.45□□□□□ -1.38
SNRPD1-203ENST00000579618 LBHQ53QV2 105 aaPredicted RBP6.45□□□□□ -1.38
SNRPD1-203ENST00000579618 CBY1Q9Y3M2 126 aa6.45□□□□□ -1.38
SNRPD1-203ENST00000579618 M0R378 163 aa6.44□□□□□ -1.38
SNRPD1-203ENST00000579618 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
SNRPD1-203ENST00000579618 CTAG1AP78358 180 aa6.44□□□□□ -1.38
SNRPD1-203ENST00000579618 FAM19A5Q7Z5A7 132 aaPredicted RBP6.44□□□□□ -1.38
SNRPD1-203ENST00000579618 TRAV13-2A0A0B4J235 113 aa6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 A0A1W2PNN7 141 aa6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 FAM168BA1KXE4 195 aa6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 A4D1N5 150 aa6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 PANO1I0J062 215 aa6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 M0QXV9 152 aa6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 MRPL55Q7Z7F7 128 aaKnown RBP6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 C22orf24Q9Y442 160 aa6.43□□□□□ -1.38
SNRPD1-203ENST00000579618 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
SNRPD1-203ENST00000579618 TMEM126AQ9H061 195 aa6.42□□□□□ -1.38
SNRPD1-203ENST00000579618 LPAP08519 4548 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms