RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 HIGD2BQ4VC39 106 aa6.24□□□□□ -1.41
CDK5RAP3-208ENST00000578525 LINC01556Q5JQF7 62 aa6.24□□□□□ -1.41
CDK5RAP3-208ENST00000578525 C9orf129Q5T035 196 aaKnown RBP6.24□□□□□ -1.41
CDK5RAP3-208ENST00000578525 LINC00575Q6W349 94 aa6.24□□□□□ -1.41
CDK5RAP3-208ENST00000578525 CAMK2N2Q96S95 79 aa6.24□□□□□ -1.41
CDK5RAP3-208ENST00000578525 F8WDY8 70 aa6.23□□□□□ -1.41
CDK5RAP3-208ENST00000578525 NHLRC4P0CG21 123 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-208ENST00000578525 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
CDK5RAP3-208ENST00000578525 C15orf56Q8N910 161 aa6.23□□□□□ -1.41
CDK5RAP3-208ENST00000578525 OTOGQ6ZRI0 2925 aa6.23□□□□□ -1.41
CDK5RAP3-208ENST00000578525 HECTD1Q9ULT8 2610 aa6.22□□□□□ -1.41
CDK5RAP3-208ENST00000578525 NSD1Q96L73 2696 aaPredicted RBP6.22□□□□□ -1.41
CDK5RAP3-208ENST00000578525 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
CDK5RAP3-208ENST00000578525 JMJD7-PLA2G4BH0Y9G9 81 aa6.22□□□□□ -1.41
CDK5RAP3-208ENST00000578525 TMEM256-PLSCR3K7ERE1 68 aa6.22□□□□□ -1.41
CDK5RAP3-208ENST00000578525 C1orf43Q9BWL3 253 aa6.22□□□□□ -1.41
CDK5RAP3-208ENST00000578525 NOTCH2Q04721 2471 aa6.21□□□□□ -1.41
CDK5RAP3-208ENST00000578525 GCN1Q92616 2671 aaKnown RBP6.21□□□□□ -1.42
CDK5RAP3-208ENST00000578525 hADV29S1A0JD25 119 aa6.21□□□□□ -1.42
CDK5RAP3-208ENST00000578525 Q6ZRU5 148 aa6.21□□□□□ -1.42
CDK5RAP3-208ENST00000578525 DIRC1Q969H9 104 aa6.21□□□□□ -1.42
CDK5RAP3-208ENST00000578525 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
CDK5RAP3-208ENST00000578525 IGKV2D-24A0A075B6R9 120 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 TRBV10-3A0A0K0K1G6 114 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 H3BQ85 93 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 CCKP06307 115 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 DNAH10OSP0CZ25 163 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 VPREB1P12018 145 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 Q6JHZ5 121 aa6.2□□□□□ -1.42
CDK5RAP3-208ENST00000578525 M0R378 163 aa6.19□□□□□ -1.42
CDK5RAP3-208ENST00000578525 TRBV7-6A0A0J9YX20 115 aa6.18□□□□□ -1.42
CDK5RAP3-208ENST00000578525 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
CDK5RAP3-208ENST00000578525 COX7BP24311 80 aa6.18□□□□□ -1.42
CDK5RAP3-208ENST00000578525 TM2D3Q9BRN9 247 aa6.18□□□□□ -1.42
CDK5RAP3-208ENST00000578525 LINC00846Q9NV44 126 aa6.18□□□□□ -1.42
CDK5RAP3-208ENST00000578525 HIVEP1P15822 2718 aa6.17□□□□□ -1.42
CDK5RAP3-208ENST00000578525 FAM236AA0A1B0GUQ0 79 aa6.17□□□□□ -1.42
CDK5RAP3-208ENST00000578525 FAM236BA0A1B0GV22 79 aa6.17□□□□□ -1.42
CDK5RAP3-208ENST00000578525 ZNF73O43830 326 aaPredicted RBP6.17□□□□□ -1.42
CDK5RAP3-208ENST00000578525 SYCNQ0VAF6 134 aa6.17□□□□□ -1.42
CDK5RAP3-208ENST00000578525 NIPBLQ6KC79 2804 aaeCLIP6.17□□□□□ -1.426e-6■■■□□ 16.7
CDK5RAP3-208ENST00000578525 ELOF1P60002 83 aaKnown RBP6.16□□□□□ -1.42
CDK5RAP3-208ENST00000578525 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.16□□□□□ -1.42
CDK5RAP3-208ENST00000578525 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
CDK5RAP3-208ENST00000578525 CCDC179H3BU77 68 aa6.15□□□□□ -1.42
CDK5RAP3-208ENST00000578525 K7EIL1 84 aa6.15□□□□□ -1.42
CDK5RAP3-208ENST00000578525 Q6ZQY7 126 aa6.15□□□□□ -1.42
CDK5RAP3-208ENST00000578525 LINC00588Q9Y4M8 146 aa6.15□□□□□ -1.42
CDK5RAP3-208ENST00000578525 IGKV3D-7A0A0C4DH55 119 aa6.14□□□□□ -1.43
CDK5RAP3-208ENST00000578525 GHRHP01286 108 aa6.14□□□□□ -1.43
CDK5RAP3-208ENST00000578525 Q6ZRP5 223 aa6.14□□□□□ -1.43
CDK5RAP3-208ENST00000578525 RMI2Q96E14 147 aa6.14□□□□□ -1.43
CDK5RAP3-208ENST00000578525 LAMTOR3Q9UHA4 124 aa6.14□□□□□ -1.43
CDK5RAP3-208ENST00000578525 TEP1Q99973 2627 aaKnown RBP6.14□□□□□ -1.43
CDK5RAP3-208ENST00000578525 PRB2P02812 416 aaPredicted RBP6.13□□□□□ -1.43
CDK5RAP3-208ENST00000578525 TLX1NBP0CAT3 122 aa6.13□□□□□ -1.43
CDK5RAP3-208ENST00000578525 RBM3P98179 157 aaKnown RBP6.13□□□□□ -1.43
CDK5RAP3-208ENST00000578525 ATP5EP2Q5VTU8 51 aa6.13□□□□□ -1.43
CDK5RAP3-208ENST00000578525 Q6ZQT0 140 aa6.13□□□□□ -1.43
CDK5RAP3-208ENST00000578525 BAHCC1Q9P281 2608 aa6.12□□□□□ -1.43
CDK5RAP3-208ENST00000578525 VWFP04275 2813 aa6.12□□□□□ -1.43
CDK5RAP3-208ENST00000578525 PDE6GP18545 87 aa6.12□□□□□ -1.43
CDK5RAP3-208ENST00000578525 HIST1H4AP62805 103 aaKnown RBP6.12□□□□□ -1.43
CDK5RAP3-208ENST00000578525 MRAPQ8TCY5 172 aa6.12□□□□□ -1.43
CDK5RAP3-208ENST00000578525 PLA2G2DQ9UNK4 145 aa6.12□□□□□ -1.43
CDK5RAP3-208ENST00000578525 TENM1Q9UKZ4 2725 aa6.11□□□□□ -1.43
CDK5RAP3-208ENST00000578525 USP17L23D6RBM5 183 aa6.11□□□□□ -1.43
CDK5RAP3-208ENST00000578525 LINC00528Q8N1L1 170 aa6.11□□□□□ -1.43
CDK5RAP3-208ENST00000578525 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
CDK5RAP3-208ENST00000578525 UPK3BQ9BT76 320 aa6.11□□□□□ -1.43
CDK5RAP3-208ENST00000578525 B5MCH6 92 aa6.1□□□□□ -1.43
CDK5RAP3-208ENST00000578525 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
CDK5RAP3-208ENST00000578525 UBL5Q9BZL1 73 aa6.1□□□□□ -1.43
CDK5RAP3-208ENST00000578525 ATRQ13535 2644 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 IGLV5-37A0A075B6J1 123 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 ATOX1O00244 68 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 CASC10Q5T4H9 136 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 SERTAD4-AS1Q5TG53 156 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 C7orf33Q8WU49 177 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 KCNQ1DNQ9H478 68 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 NBEAL2Q6ZNJ1 2754 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 F8P00451 2351 aa6.09□□□□□ -1.43
CDK5RAP3-208ENST00000578525 TRBV7-4A0A0J9YYF1 115 aa6.07□□□□□ -1.44
CDK5RAP3-208ENST00000578525 PRYO14603 147 aa6.07□□□□□ -1.44
CDK5RAP3-208ENST00000578525 C3orf22Q8N5N4 141 aa6.07□□□□□ -1.44
CDK5RAP3-208ENST00000578525 M0R2N4 97 aa6.06□□□□□ -1.44
CDK5RAP3-208ENST00000578525 UQCRQO14949 82 aa6.06□□□□□ -1.44
CDK5RAP3-208ENST00000578525 COX7CP15954 63 aa6.06□□□□□ -1.44
CDK5RAP3-208ENST00000578525 A0A087WVE0 104 aa6.05□□□□□ -1.44
CDK5RAP3-208ENST00000578525 LOC107984640A0A0U1RRK4 108 aa6.05□□□□□ -1.44
CDK5RAP3-208ENST00000578525 SS18L2Q9UHA2 77 aa6.05□□□□□ -1.44
CDK5RAP3-208ENST00000578525 C9orf153Q5TBE3 101 aa6.04□□□□□ -1.44
CDK5RAP3-208ENST00000578525 Q6ZVQ6 151 aa6.04□□□□□ -1.44
CDK5RAP3-208ENST00000578525 DHRS4-AS1Q9P1J3 65 aa6.04□□□□□ -1.44
CDK5RAP3-208ENST00000578525 DNAH3Q8TD57 4116 aa6.04□□□□□ -1.44
CDK5RAP3-208ENST00000578525 IGLV1-50A0A075B6I6 118 aa6.03□□□□□ -1.44
CDK5RAP3-208ENST00000578525 ETDCA0A1B0GVM5 59 aa6.02□□□□□ -1.45
CDK5RAP3-208ENST00000578525 FAM168BA1KXE4 195 aa6.02□□□□□ -1.45
CDK5RAP3-208ENST00000578525 SPRR1AP35321 89 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms