RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 A0A1B0GX51 115 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 DNAL4O96015 105 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 RNF151Q2KHN1 245 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 C6orf223Q8N319 242 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 LINC00337Q8N6G1 96 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 VPS25Q9BRG1 176 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 Q9HAA7 133 aa7.44□□□□□ -1.22
SKA2-204ENST00000578519 SYCNQ0VAF6 134 aa7.43□□□□□ -1.22
SKA2-204ENST00000578519 SMIM11BQ8TCY0 68 aa7.43□□□□□ -1.22
SKA2-204ENST00000578519 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
SKA2-204ENST00000578519 CLEC2BQ92478 149 aa7.42□□□□□ -1.22
SKA2-204ENST00000578519 C6orf48Q9UBA6 75 aa7.42□□□□□ -1.22
SKA2-204ENST00000578519 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.22
SKA2-204ENST00000578519 NDUFC2-KCTD14E9PQ53 114 aa7.41□□□□□ -1.22
SKA2-204ENST00000578519 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
SKA2-204ENST00000578519 C10orf25Q5T742 122 aa7.41□□□□□ -1.22
SKA2-204ENST00000578519 MTURNQ8N3F0 131 aa7.41□□□□□ -1.22
SKA2-204ENST00000578519 C15orf56Q8N910 161 aa7.41□□□□□ -1.22
SKA2-204ENST00000578519 VWFP04275 2813 aa7.4□□□□□ -1.22
SKA2-204ENST00000578519 FBN1P35555 2871 aaKnown RBP7.4□□□□□ -1.22
SKA2-204ENST00000578519 H3BQ85 93 aa7.4□□□□□ -1.22
SKA2-204ENST00000578519 GHRHP01286 108 aa7.4□□□□□ -1.22
SKA2-204ENST00000578519 TTC32Q5I0X7 151 aa7.4□□□□□ -1.22
SKA2-204ENST00000578519 APLNQ9ULZ1 77 aa7.4□□□□□ -1.22
SKA2-204ENST00000578519 PCP4P48539 62 aa7.39□□□□□ -1.23
SKA2-204ENST00000578519 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
SKA2-204ENST00000578519 C14orf177Q52M58 125 aa7.39□□□□□ -1.23
SKA2-204ENST00000578519 Q6ZRU5 148 aa7.39□□□□□ -1.23
SKA2-204ENST00000578519 LINC00526Q96FQ7 95 aa7.39□□□□□ -1.23
SKA2-204ENST00000578519 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
SKA2-204ENST00000578519 BAALC-AS2P0C853 105 aa7.38□□□□□ -1.23
SKA2-204ENST00000578519 USP17L23D6RBM5 183 aa7.37□□□□□ -1.23
SKA2-204ENST00000578519 M0R378 163 aa7.37□□□□□ -1.23
SKA2-204ENST00000578519 NCR3O14931 201 aa7.37□□□□□ -1.23
SKA2-204ENST00000578519 PSCAO43653 123 aa7.37□□□□□ -1.23
SKA2-204ENST00000578519 TLX1NBP0CAT3 122 aa7.37□□□□□ -1.23
SKA2-204ENST00000578519 STAB1Q9NY15 2570 aa7.36□□□□□ -1.23
SKA2-204ENST00000578519 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
SKA2-204ENST00000578519 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
SKA2-204ENST00000578519 RPL18AQ02543 176 aaKnown RBP7.35□□□□□ -1.23
SKA2-204ENST00000578519 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
SKA2-204ENST00000578519 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
SKA2-204ENST00000578519 IGLV6-57P01721 117 aa7.34□□□□□ -1.23
SKA2-204ENST00000578519 NKAPP1Q8N9T2 125 aa7.34□□□□□ -1.23
SKA2-204ENST00000578519 ORMDL1Q9P0S3 153 aa7.34□□□□□ -1.23
SKA2-204ENST00000578519 MAST4O15021 2626 aa7.34□□□□□ -1.23
SKA2-204ENST00000578519 LOC107984640A0A0U1RRK4 108 aa7.33□□□□□ -1.24
SKA2-204ENST00000578519 PRR3P79522 188 aaKnown RBP7.33□□□□□ -1.24
SKA2-204ENST00000578519 GAGE2EQ4V326 116 aa7.33□□□□□ -1.24
SKA2-204ENST00000578519 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
SKA2-204ENST00000578519 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
SKA2-204ENST00000578519 GAGE2DQ9UEU5 116 aa7.33□□□□□ -1.24
SKA2-204ENST00000578519 PLA2G2DQ9UNK4 145 aa7.33□□□□□ -1.24
SKA2-204ENST00000578519 COL6A5A8TX70 2615 aa7.33□□□□□ -1.24
SKA2-204ENST00000578519 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
SKA2-204ENST00000578519 TMEM256-PLSCR3K7ERE1 68 aa7.32□□□□□ -1.24
SKA2-204ENST00000578519 LECT2O14960 151 aa7.32□□□□□ -1.24
SKA2-204ENST00000578519 ACYP1P07311 99 aa7.32□□□□□ -1.24
SKA2-204ENST00000578519 C6orf99Q4VX62 202 aa7.32□□□□□ -1.24
SKA2-204ENST00000578519 VPREB1P12018 145 aa7.31□□□□□ -1.24
SKA2-204ENST00000578519 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
SKA2-204ENST00000578519 FAM218AQ96MZ4 157 aa7.31□□□□□ -1.24
SKA2-204ENST00000578519 SIGMAR1Q99720 223 aa7.31□□□□□ -1.24
SKA2-204ENST00000578519 hADV29S1A0JD25 119 aa7.3□□□□□ -1.24
SKA2-204ENST00000578519 Q6ZRP5 223 aa7.3□□□□□ -1.24
SKA2-204ENST00000578519 Q8N814 137 aa7.3□□□□□ -1.24
SKA2-204ENST00000578519 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
SKA2-204ENST00000578519 KRTAP4-2Q9BYR5 136 aa7.3□□□□□ -1.24
SKA2-204ENST00000578519 A0A087WYN8 130 aa7.29□□□□□ -1.24
SKA2-204ENST00000578519 TRBV10-3A0A0K0K1G6 114 aa7.29□□□□□ -1.24
SKA2-204ENST00000578519 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
SKA2-204ENST00000578519 JMJD7-PLA2G4BH0Y9G9 81 aa7.29□□□□□ -1.24
SKA2-204ENST00000578519 COX7BP24311 80 aa7.29□□□□□ -1.24
SKA2-204ENST00000578519 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
SKA2-204ENST00000578519 LINC00167Q96N53 147 aa7.29□□□□□ -1.24
SKA2-204ENST00000578519 NBDYA0A0U1RRE5 68 aa7.28□□□□□ -1.24
SKA2-204ENST00000578519 FAM240AA0A1B0GVK7 77 aa7.28□□□□□ -1.24
SKA2-204ENST00000578519 ZNF73O43830 326 aaPredicted RBP7.28□□□□□ -1.24
SKA2-204ENST00000578519 DNAH3Q8TD57 4116 aa7.27□□□□□ -1.25
SKA2-204ENST00000578519 IGLV5-37A0A075B6J1 123 aa7.27□□□□□ -1.25
SKA2-204ENST00000578519 CNBPP62633 177 aaKnown RBP7.27□□□□□ -1.25
SKA2-204ENST00000578519 GAGE2BQ13066 116 aa7.26□□□□□ -1.25
SKA2-204ENST00000578519 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.26□□□□□ -1.25
SKA2-204ENST00000578519 Q8NDZ9 215 aa7.25□□□□□ -1.25
SKA2-204ENST00000578519 CMYA5Q8N3K9 4069 aa7.24□□□□□ -1.25
SKA2-204ENST00000578519 PRYO14603 147 aa7.24□□□□□ -1.25
SKA2-204ENST00000578519 ELOF1P60002 83 aaKnown RBP7.24□□□□□ -1.25
SKA2-204ENST00000578519 C9orf129Q5T035 196 aaKnown RBP7.24□□□□□ -1.25
SKA2-204ENST00000578519 CASC10Q5T4H9 136 aa7.24□□□□□ -1.25
SKA2-204ENST00000578519 KRTAP17-1Q9BYP8 105 aa7.24□□□□□ -1.25
SKA2-204ENST00000578519 KCNQ1DNQ9H478 68 aa7.24□□□□□ -1.25
SKA2-204ENST00000578519 SLPIP03973 132 aa7.23□□□□□ -1.25
SKA2-204ENST00000578519 SCGB1A1P11684 91 aa7.23□□□□□ -1.25
SKA2-204ENST00000578519 LINC00474Q9P2X8 69 aa7.23□□□□□ -1.25
SKA2-204ENST00000578519 C16orf90A8MZG2 172 aa7.22□□□□□ -1.25
SKA2-204ENST00000578519 PDE6GP18545 87 aa7.22□□□□□ -1.25
SKA2-204ENST00000578519 C7orf33Q8WU49 177 aa7.21□□□□□ -1.26
SKA2-204ENST00000578519 KRTAP1-5Q9BYS1 174 aa7.21□□□□□ -1.26
SKA2-204ENST00000578519 DHRS4-AS1Q9P1J3 65 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms