RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 C14orf132Q9NPU4 83 aa11.82□□□□□ -0.52
ERBB2-205ENST00000578199 NDUFC2O95298 119 aa11.81□□□□□ -0.52
ERBB2-205ENST00000578199 NOTCH1P46531 2555 aa11.8□□□□□ -0.52
ERBB2-205ENST00000578199 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
ERBB2-205ENST00000578199 ACYP1P07311 99 aa11.79□□□□□ -0.52
ERBB2-205ENST00000578199 HIGD2BQ4VC39 106 aa11.79□□□□□ -0.52
ERBB2-205ENST00000578199 INAFM2P0DMQ5 153 aa11.78□□□□□ -0.52
ERBB2-205ENST00000578199 C6orf99Q4VX62 202 aa11.78□□□□□ -0.52
ERBB2-205ENST00000578199 ESRGQ1W209 222 aa11.78□□□□□ -0.52
ERBB2-205ENST00000578199 S100A7L2Q5SY68 101 aa11.78□□□□□ -0.52
ERBB2-205ENST00000578199 XAGE1AQ9HD64 81 aa11.77□□□□□ -0.53
ERBB2-205ENST00000578199 C6orf48Q9UBA6 75 aa11.77□□□□□ -0.53
ERBB2-205ENST00000578199 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.53
ERBB2-205ENST00000578199 EGFEM1PQ0D2K5 195 aa11.77□□□□□ -0.53
ERBB2-205ENST00000578199 TRBV7-7A0A0K0K1E9 115 aa11.76□□□□□ -0.53
ERBB2-205ENST00000578199 RPL18AQ02543 176 aaKnown RBP11.76□□□□□ -0.53
ERBB2-205ENST00000578199 Q8N814 137 aa11.76□□□□□ -0.53
ERBB2-205ENST00000578199 ORMDL1Q9P0S3 153 aa11.76□□□□□ -0.53
ERBB2-205ENST00000578199 PRB2P02812 416 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-205ENST00000578199 C5orf47Q569G3 176 aa11.73□□□□□ -0.53
ERBB2-205ENST00000578199 OBSCN-AS1Q96MR7 158 aa11.73□□□□□ -0.53
ERBB2-205ENST00000578199 H3BNG1 76 aa11.72□□□□□ -0.53
ERBB2-205ENST00000578199 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
ERBB2-205ENST00000578199 DEFB131BA0A096LNP1 70 aa11.71□□□□□ -0.53
ERBB2-205ENST00000578199 COL6A5A8TX70 2615 aa11.71□□□□□ -0.53
ERBB2-205ENST00000578199 ZNF561-AS1K7EIQ3 104 aa11.71□□□□□ -0.53
ERBB2-205ENST00000578199 SDIM1Q6ZPB5 146 aa11.71□□□□□ -0.53
ERBB2-205ENST00000578199 FAM236AA0A1B0GUQ0 79 aa11.7□□□□□ -0.54
ERBB2-205ENST00000578199 FAM236BA0A1B0GV22 79 aa11.7□□□□□ -0.54
ERBB2-205ENST00000578199 LINC00643Q86TS7 51 aa11.7□□□□□ -0.54
ERBB2-205ENST00000578199 C11orf45Q8TAV5 145 aa11.7□□□□□ -0.54
ERBB2-205ENST00000578199 LOC107984640A0A0U1RRK4 108 aa11.7□□□□□ -0.54
ERBB2-205ENST00000578199 LINC00167Q96N53 147 aa11.7□□□□□ -0.54
ERBB2-205ENST00000578199 CAMK2N2Q96S95 79 aa11.69□□□□□ -0.54
ERBB2-205ENST00000578199 NBEAL1Q6ZS30 2694 aa11.68□□□□□ -0.54
ERBB2-205ENST00000578199 GVQW2A0A096LPI5 108 aaPredicted RBP11.68□□□□□ -0.54
ERBB2-205ENST00000578199 C9orf153Q5TBE3 101 aa11.68□□□□□ -0.54
ERBB2-205ENST00000578199 LINC00846Q9NV44 126 aa11.68□□□□□ -0.54
ERBB2-205ENST00000578199 IGLV6-57P01721 117 aa11.67□□□□□ -0.54
ERBB2-205ENST00000578199 Q6ZRU5 148 aa11.67□□□□□ -0.54
ERBB2-205ENST00000578199 C3orf22Q8N5N4 141 aa11.67□□□□□ -0.54
ERBB2-205ENST00000578199 C15orf56Q8N910 161 aa11.67□□□□□ -0.54
ERBB2-205ENST00000578199 TRBV10-3A0A0K0K1G6 114 aa11.67□□□□□ -0.54
ERBB2-205ENST00000578199 LINC00575Q6W349 94 aa11.67□□□□□ -0.54
ERBB2-205ENST00000578199 IMUPQ9GZP8 106 aa11.66□□□□□ -0.54
ERBB2-205ENST00000578199 IGKV2D-24A0A075B6R9 120 aa11.66□□□□□ -0.54
ERBB2-205ENST00000578199 A0A1B0GX51 115 aa11.65□□□□□ -0.54
ERBB2-205ENST00000578199 BAHCC1Q9P281 2608 aa11.65□□□□□ -0.54
ERBB2-205ENST00000578199 TMEM256-PLSCR3K7ERE1 68 aa11.65□□□□□ -0.54
ERBB2-205ENST00000578199 UQCRQO14949 82 aa11.64□□□□□ -0.55
ERBB2-205ENST00000578199 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
ERBB2-205ENST00000578199 hADV29S1A0JD25 119 aa11.63□□□□□ -0.55
ERBB2-205ENST00000578199 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
ERBB2-205ENST00000578199 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
ERBB2-205ENST00000578199 C1orf43Q9BWL3 253 aa11.63□□□□□ -0.55
ERBB2-205ENST00000578199 J3KT08 172 aa11.63□□□□□ -0.55
ERBB2-205ENST00000578199 HUWE1Q7Z6Z7 4374 aaKnown RBP11.62□□□□□ -0.55
ERBB2-205ENST00000578199 IGKV3D-7A0A0C4DH55 119 aa11.62□□□□□ -0.55
ERBB2-205ENST00000578199 TRAV23DV6A0A075B6W5 121 aa11.61□□□□□ -0.55
ERBB2-205ENST00000578199 LINC01556Q5JQF7 62 aa11.61□□□□□ -0.55
ERBB2-205ENST00000578199 CCKP06307 115 aa11.6□□□□□ -0.55
ERBB2-205ENST00000578199 JMJD7-PLA2G4BH0Y9G9 81 aa11.59□□□□□ -0.55
ERBB2-205ENST00000578199 VPREB1P12018 145 aa11.59□□□□□ -0.55
ERBB2-205ENST00000578199 Q6ZQY7 126 aa11.59□□□□□ -0.55
ERBB2-205ENST00000578199 Q6ZRP5 223 aa11.59□□□□□ -0.55
ERBB2-205ENST00000578199 LYSTQ99698 3801 aa11.58□□□□□ -0.56
ERBB2-205ENST00000578199 NDUFC2-KCTD14E9PQ53 114 aa11.57□□□□□ -0.56
ERBB2-205ENST00000578199 ZNF73O43830 326 aaPredicted RBP11.57□□□□□ -0.56
ERBB2-205ENST00000578199 DIRC1Q969H9 104 aa11.57□□□□□ -0.56
ERBB2-205ENST00000578199 DNAH1Q9P2D7 4330 aa11.56□□□□□ -0.56
ERBB2-205ENST00000578199 LAMTOR3Q9UHA4 124 aa11.56□□□□□ -0.56
ERBB2-205ENST00000578199 COX7CP15954 63 aa11.55□□□□□ -0.56
ERBB2-205ENST00000578199 RPS28P62857 69 aaKnown RBP11.55□□□□□ -0.56
ERBB2-205ENST00000578199 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
ERBB2-205ENST00000578199 LINC00588Q9Y4M8 146 aa11.55□□□□□ -0.56
ERBB2-205ENST00000578199 CASC10Q5T4H9 136 aa11.54□□□□□ -0.56
ERBB2-205ENST00000578199 A0A087WVE0 104 aa11.53□□□□□ -0.56
ERBB2-205ENST00000578199 M0R2N4 97 aa11.53□□□□□ -0.56
ERBB2-205ENST00000578199 DNAH10OSP0CZ25 163 aa11.53□□□□□ -0.56
ERBB2-205ENST00000578199 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
ERBB2-205ENST00000578199 CRYGAP11844 174 aa11.52□□□□□ -0.56
ERBB2-205ENST00000578199 K7EIL1 84 aa11.52□□□□□ -0.57
ERBB2-205ENST00000578199 COX7BP24311 80 aa11.52□□□□□ -0.57
ERBB2-205ENST00000578199 RBM3P98179 157 aaKnown RBP11.52□□□□□ -0.57
ERBB2-205ENST00000578199 M0R378 163 aa11.51□□□□□ -0.57
ERBB2-205ENST00000578199 TRAV10A0A0B4J240 114 aa11.51□□□□□ -0.57
ERBB2-205ENST00000578199 Q6JHZ5 121 aa11.51□□□□□ -0.57
ERBB2-205ENST00000578199 COL7A1Q02388 2944 aa11.5□□□□□ -0.57
ERBB2-205ENST00000578199 ELOF1P60002 83 aaKnown RBP11.5□□□□□ -0.57
ERBB2-205ENST00000578199 MGAM2Q2M2H8 2515 aa11.5□□□□□ -0.57
ERBB2-205ENST00000578199 Q6ZQT0 140 aa11.49□□□□□ -0.57
ERBB2-205ENST00000578199 TM2D3Q9BRN9 247 aa11.49□□□□□ -0.57
ERBB2-205ENST00000578199 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
ERBB2-205ENST00000578199 DNAH10Q8IVF4 4471 aa11.48□□□□□ -0.57
ERBB2-205ENST00000578199 HIST1H4AP62805 103 aaKnown RBP11.47□□□□□ -0.57
ERBB2-205ENST00000578199 CYSTM1Q9H1C7 97 aa11.47□□□□□ -0.57
ERBB2-205ENST00000578199 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
ERBB2-205ENST00000578199 ATOX1O00244 68 aa11.45□□□□□ -0.58
ERBB2-205ENST00000578199 DSCR8Q96T75 97 aa11.44□□□□□ -0.58
ERBB2-205ENST00000578199 FAM168BA1KXE4 195 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms