RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 ZNF407Q9C0G0 2248 aa2.9□□□□□ -1.95
CDH8-205ENST00000577730 AGRNO00468 2067 aa2.9□□□□□ -1.95
CDH8-205ENST00000577730 NACAE9PAV3 2078 aa2.9□□□□□ -1.95
CDH8-205ENST00000577730 KRTAP16-1A8MUX0 517 aa2.9□□□□□ -1.95
CDH8-205ENST00000577730 PLA2G1BP04054 148 aaKnown RBP2.9□□□□□ -1.95
CDH8-205ENST00000577730 HCFC1P51610 2035 aa2.89□□□□□ -1.95
CDH8-205ENST00000577730 FER1L5A0AVI2 2057 aa2.89□□□□□ -1.95
CDH8-205ENST00000577730 LINC01556Q5JQF7 62 aa2.89□□□□□ -1.95
CDH8-205ENST00000577730 HRES1P13985 223 aa2.89□□□□□ -1.95
CDH8-205ENST00000577730 PRR14LQ5THK1 2151 aa2.89□□□□□ -1.95
CDH8-205ENST00000577730 ROS1P08922 2347 aa2.89□□□□□ -1.95
CDH8-205ENST00000577730 CPAMD8Q8IZJ3 1885 aa2.89□□□□□ -1.95
CDH8-205ENST00000577730 POLEQ07864 2286 aa2.88□□□□□ -1.95
CDH8-205ENST00000577730 PKDREJQ9NTG1 2253 aa2.88□□□□□ -1.95
CDH8-205ENST00000577730 SPRR4Q96PI1 79 aa2.88□□□□□ -1.95
CDH8-205ENST00000577730 TRIOBPQ9H2D6 2365 aa2.88□□□□□ -1.95
CDH8-205ENST00000577730 APLNQ9ULZ1 77 aa2.88□□□□□ -1.95
CDH8-205ENST00000577730 C15orf56Q8N910 161 aa2.87□□□□□ -1.95
CDH8-205ENST00000577730 DOCK10Q96BY6 2186 aa2.87□□□□□ -1.95
CDH8-205ENST00000577730 TNCP24821 2201 aa2.87□□□□□ -1.95
CDH8-205ENST00000577730 A0A0G2JQZ4 141 aa2.87□□□□□ -1.95
CDH8-205ENST00000577730 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
CDH8-205ENST00000577730 MUC22E2RYF6 1773 aaPredicted RBP2.87□□□□□ -1.95
CDH8-205ENST00000577730 PTPRZ1P23471 2315 aaPredicted RBP2.87□□□□□ -1.95
CDH8-205ENST00000577730 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
CDH8-205ENST00000577730 NCOA6Q14686 2063 aaPredicted RBP2.86□□□□□ -1.95
CDH8-205ENST00000577730 SPTBN2O15020 2390 aa2.86□□□□□ -1.95
CDH8-205ENST00000577730 EXPH5Q8NEV8 1989 aa2.86□□□□□ -1.95
CDH8-205ENST00000577730 CHTF8P0CG12 524 aa2.86□□□□□ -1.95
CDH8-205ENST00000577730 ZCCHC13Q8WW36 166 aaKnown RBP2.86□□□□□ -1.95
CDH8-205ENST00000577730 CEP290O15078 2479 aa2.86□□□□□ -1.95
CDH8-205ENST00000577730 PTPRSQ13332 1948 aa2.86□□□□□ -1.95
CDH8-205ENST00000577730 AKAP6Q13023 2319 aa2.86□□□□□ -1.95
CDH8-205ENST00000577730 CACNA1EQ15878 2313 aa2.85□□□□□ -1.95
CDH8-205ENST00000577730 EML5Q05BV3 1969 aa2.85□□□□□ -1.95
CDH8-205ENST00000577730 PLA2G2DQ9UNK4 145 aa2.85□□□□□ -1.95
CDH8-205ENST00000577730 DSCAMO60469 2012 aa2.85□□□□□ -1.95
CDH8-205ENST00000577730 H3BNG1 76 aa2.85□□□□□ -1.95
CDH8-205ENST00000577730 CNBPP62633 177 aaKnown RBP2.85□□□□□ -1.95
CDH8-205ENST00000577730 FAM168BA1KXE4 195 aa2.85□□□□□ -1.95
CDH8-205ENST00000577730 A0A087X002 238 aa2.84□□□□□ -1.95
CDH8-205ENST00000577730 PRR34Q9NV39 138 aa2.84□□□□□ -1.95
CDH8-205ENST00000577730 TLX1NBP0CAT3 122 aa2.84□□□□□ -1.95
CDH8-205ENST00000577730 NAV3Q8IVL0 2385 aa2.84□□□□□ -1.95
CDH8-205ENST00000577730 MMP24-AS1A0A0U1RRL7 71 aa2.84□□□□□ -1.96
CDH8-205ENST00000577730 CADP27708 2225 aa2.84□□□□□ -1.96
CDH8-205ENST00000577730 A0A1B0GU33 70 aa2.83□□□□□ -1.96
CDH8-205ENST00000577730 ADAMTS20P59510 1910 aa2.83□□□□□ -1.96
CDH8-205ENST00000577730 A8MU10 97 aa2.83□□□□□ -1.96
CDH8-205ENST00000577730 SPATA8Q6RVD6 105 aa2.82□□□□□ -1.96
CDH8-205ENST00000577730 LINC00612Q8N6U2 182 aa2.82□□□□□ -1.96
CDH8-205ENST00000577730 SPACA4Q8TDM5 124 aa2.82□□□□□ -1.96
CDH8-205ENST00000577730 ADM2Q7Z4H4 148 aa2.82□□□□□ -1.96
CDH8-205ENST00000577730 PCNX2A6NKB5 2137 aa2.82□□□□□ -1.96
CDH8-205ENST00000577730 PRRC2AP48634 2157 aaKnown RBP2.82□□□□□ -1.96
CDH8-205ENST00000577730 NOTCH4Q99466 2003 aa2.82□□□□□ -1.96
CDH8-205ENST00000577730 CEP192Q8TEP8 1941 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 CACNA1HO95180 2353 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 LCE6AA0A183 80 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 NUPR2A6NF83 97 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 Q96NJ1 140 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 C2orf16Q68DN1 1984 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 A0A1W2PPR1 153 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 ABCA4P78363 2273 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 IGLV5-37A0A075B6J1 123 aa2.81□□□□□ -1.96
CDH8-205ENST00000577730 INAFM1C9JVW0 142 aa2.8□□□□□ -1.96
CDH8-205ENST00000577730 CACNA1GO43497 2377 aa2.8□□□□□ -1.96
CDH8-205ENST00000577730 RTL8CO15255 209 aa2.8□□□□□ -1.96
CDH8-205ENST00000577730 COL6A6A6NMZ7 2263 aa2.8□□□□□ -1.96
CDH8-205ENST00000577730 A0A0D9SG42 100 aa2.8□□□□□ -1.96
CDH8-205ENST00000577730 C19orf73Q9NVV2 129 aa2.8□□□□□ -1.96
CDH8-205ENST00000577730 C2CD3Q4AC94 2353 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 ARHGAP32A7KAX9 2087 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 LY6G6CO95867 125 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 EP300Q09472 2414 aaPredicted RBP2.79□□□□□ -1.96
CDH8-205ENST00000577730 IGLV5-52A0A0A0MRZ9 124 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 ROMO1P60602 79 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 Q8NDZ9 215 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 Q8N1X5 172 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 CSNK1G2-AS1Q8NCQ2 148 aa2.79□□□□□ -1.96
CDH8-205ENST00000577730 SPTAN1Q13813 2472 aaKnown RBP2.79□□□□□ -1.96
CDH8-205ENST00000577730 GPR179Q6PRD1 2367 aa2.78□□□□□ -1.96
CDH8-205ENST00000577730 PLXNB1O43157 2135 aa2.78□□□□□ -1.96
CDH8-205ENST00000577730 APC2O95996 2303 aa2.78□□□□□ -1.96
CDH8-205ENST00000577730 GIG44P09565 113 aaPredicted RBP2.78□□□□□ -1.96
CDH8-205ENST00000577730 PTPRBP23467 1997 aa2.78□□□□□ -1.97
CDH8-205ENST00000577730 NOTCH3Q9UM47 2321 aa2.77□□□□□ -1.97
CDH8-205ENST00000577730 DNAH10OSP0CZ25 163 aa2.77□□□□□ -1.97
CDH8-205ENST00000577730 COL4A2P08572 1712 aa2.77□□□□□ -1.97
CDH8-205ENST00000577730 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
CDH8-205ENST00000577730 KRTAP29-1A8MX34 341 aaPredicted RBP2.77□□□□□ -1.97
CDH8-205ENST00000577730 Q6ZR54 194 aa2.77□□□□□ -1.97
CDH8-205ENST00000577730 GVINP1Q7Z2Y8 2422 aa2.77□□□□□ -1.97
CDH8-205ENST00000577730 LINC00472Q9H8W2 130 aa2.76□□□□□ -1.97
CDH8-205ENST00000577730 CACNA1BQ00975 2339 aa2.76□□□□□ -1.97
CDH8-205ENST00000577730 CUL9Q8IWT3 2517 aa2.76□□□□□ -1.97
CDH8-205ENST00000577730 ANKHD1Q8IWZ3 2542 aaKnown RBP2.76□□□□□ -1.97
CDH8-205ENST00000577730 ZDBF2Q9HCK1 2354 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms