RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 KRTAP29-1A8MX34 341 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 J3QL48 77 aa9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 OXTP01178 125 aa9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 C3orf79P0CE67 100 aa9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 NMUP48645 174 aa9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 RPL24P83731 157 aaKnown RBP9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 SPINK6Q6UWN8 80 aa9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 MRPL55Q7Z7F7 128 aaKnown RBP9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 NKAPP1Q8N9T2 125 aa9.25□□□□□ -0.93
TRAPPC1-207ENST00000575639 S100A6P06703 90 aa9.24□□□□□ -0.93
TRAPPC1-207ENST00000575639 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
TRAPPC1-207ENST00000575639 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
TRAPPC1-207ENST00000575639 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
TRAPPC1-207ENST00000575639 S100A2P29034 98 aa9.23□□□□□ -0.93
TRAPPC1-207ENST00000575639 E9PLD3 99 aa9.22□□□□□ -0.93
TRAPPC1-207ENST00000575639 AKR1D1P51857 326 aa9.22□□□□□ -0.93
TRAPPC1-207ENST00000575639 TSPEAR-AS2P59090 65 aa9.22□□□□□ -0.93
TRAPPC1-207ENST00000575639 IGLV7-43P04211 117 aa9.21□□□□□ -0.94
TRAPPC1-207ENST00000575639 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRAPPC1-207ENST00000575639 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
TRAPPC1-207ENST00000575639 LINC00167Q96N53 147 aa9.21□□□□□ -0.94
TRAPPC1-207ENST00000575639 GAGE10A6NGK3 116 aa9.2□□□□□ -0.94
TRAPPC1-207ENST00000575639 REG3GQ6UW15 175 aa9.2□□□□□ -0.94
TRAPPC1-207ENST00000575639 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
TRAPPC1-207ENST00000575639 MIR7-3HGQ8N6C7 128 aa9.19□□□□□ -0.94
TRAPPC1-207ENST00000575639 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
TRAPPC1-207ENST00000575639 VPREB1P12018 145 aa9.18□□□□□ -0.94
TRAPPC1-207ENST00000575639 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
TRAPPC1-207ENST00000575639 DIRC1Q969H9 104 aa9.17□□□□□ -0.94
TRAPPC1-207ENST00000575639 HIST1H2BLQ99880 126 aa9.17□□□□□ -0.94
TRAPPC1-207ENST00000575639 BOD1L2Q8IYS8 172 aa9.16□□□□□ -0.94
TRAPPC1-207ENST00000575639 IGKV2-28A0A075B6P5 120 aa9.14□□□□□ -0.95
TRAPPC1-207ENST00000575639 A0A0J9YXY3 114 aa9.14□□□□□ -0.95
TRAPPC1-207ENST00000575639 M0R378 163 aa9.14□□□□□ -0.95
TRAPPC1-207ENST00000575639 BCE1O60756 84 aa9.14□□□□□ -0.95
TRAPPC1-207ENST00000575639 IGKV2D-28P01615 120 aa9.14□□□□□ -0.95
TRAPPC1-207ENST00000575639 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
TRAPPC1-207ENST00000575639 MIEN1Q9BRT3 115 aa9.14□□□□□ -0.95
TRAPPC1-207ENST00000575639 IGLV1-50A0A075B6I6 118 aa9.13□□□□□ -0.95
TRAPPC1-207ENST00000575639 ZNF861PO60384 105 aa9.13□□□□□ -0.95
TRAPPC1-207ENST00000575639 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
TRAPPC1-207ENST00000575639 DAND5Q8N907 189 aa9.13□□□□□ -0.95
TRAPPC1-207ENST00000575639 PKHD1L1Q86WI1 4243 aa9.12□□□□□ -0.95
TRAPPC1-207ENST00000575639 IGKV2D-26A0A0A0MRZ7 120 aa9.12□□□□□ -0.95
TRAPPC1-207ENST00000575639 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
TRAPPC1-207ENST00000575639 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
TRAPPC1-207ENST00000575639 Q8NDZ9 215 aa9.12□□□□□ -0.95
TRAPPC1-207ENST00000575639 LINC01600Q96MT4 127 aa9.12□□□□□ -0.95
TRAPPC1-207ENST00000575639 LOC107984156A0A0G2JMH3 177 aa9.11□□□□□ -0.95
TRAPPC1-207ENST00000575639 H0Y9J4 135 aa9.11□□□□□ -0.95
TRAPPC1-207ENST00000575639 ARL17AQ8IVW1 177 aa9.11□□□□□ -0.95
TRAPPC1-207ENST00000575639 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
TRAPPC1-207ENST00000575639 UBE2AP49459 152 aa9.1□□□□□ -0.95
TRAPPC1-207ENST00000575639 C5orf52A6NGY3 159 aa9.09□□□□□ -0.95
TRAPPC1-207ENST00000575639 HSBP1L1C9JCN9 74 aa9.09□□□□□ -0.95
TRAPPC1-207ENST00000575639 TIMM17BO60830 172 aa9.09□□□□□ -0.95
TRAPPC1-207ENST00000575639 NCR3O14931 201 aa9.08□□□□□ -0.96
TRAPPC1-207ENST00000575639 S100A12P80511 92 aa9.08□□□□□ -0.96
TRAPPC1-207ENST00000575639 ADAMTSL4-AS1Q5T5F5 129 aa9.08□□□□□ -0.96
TRAPPC1-207ENST00000575639 TMEM126AQ9H061 195 aa9.08□□□□□ -0.96
TRAPPC1-207ENST00000575639 FAT3Q8TDW7 4589 aa9.08□□□□□ -0.96
TRAPPC1-207ENST00000575639 TRBV10-2A0A0K0K1G8 114 aa9.07□□□□□ -0.96
TRAPPC1-207ENST00000575639 ANKRD39Q53RE8 183 aa9.07□□□□□ -0.96
TRAPPC1-207ENST00000575639 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
TRAPPC1-207ENST00000575639 TTTY13Q9BZ97 58 aa9.07□□□□□ -0.96
TRAPPC1-207ENST00000575639 TMEM238C9JI98 176 aa9.06□□□□□ -0.96
TRAPPC1-207ENST00000575639 NDUFC2O95298 119 aa9.06□□□□□ -0.96
TRAPPC1-207ENST00000575639 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
TRAPPC1-207ENST00000575639 FAM19A1Q7Z5A9 133 aa9.06□□□□□ -0.96
TRAPPC1-207ENST00000575639 SPANXB1Q9NS25 103 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC1-207ENST00000575639 SCGB1D1O95968 90 aa9.05□□□□□ -0.96
TRAPPC1-207ENST00000575639 NPC2P61916 151 aa9.05□□□□□ -0.96
TRAPPC1-207ENST00000575639 PRYO14603 147 aa9.04□□□□□ -0.96
TRAPPC1-207ENST00000575639 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
TRAPPC1-207ENST00000575639 COPS9Q8WXC6 57 aa9.04□□□□□ -0.96
TRAPPC1-207ENST00000575639 LITAFQ99732 161 aa9.04□□□□□ -0.96
TRAPPC1-207ENST00000575639 DDTP30046 118 aa9.03□□□□□ -0.96
TRAPPC1-207ENST00000575639 S100A7L2Q5SY68 101 aa9.03□□□□□ -0.96
TRAPPC1-207ENST00000575639 KCNQ1DNQ9H478 68 aa9.03□□□□□ -0.96
TRAPPC1-207ENST00000575639 TRBV10-3A0A0K0K1G6 114 aa9.02□□□□□ -0.97
TRAPPC1-207ENST00000575639 KRTAP10-8P60410 259 aa9.02□□□□□ -0.97
TRAPPC1-207ENST00000575639 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
TRAPPC1-207ENST00000575639 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.97
TRAPPC1-207ENST00000575639 PCP2Q8IVA1 136 aa9.02□□□□□ -0.97
TRAPPC1-207ENST00000575639 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
TRAPPC1-207ENST00000575639 PRLHP81277 87 aa9.01□□□□□ -0.97
TRAPPC1-207ENST00000575639 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
TRAPPC1-207ENST00000575639 Q6ZVH6 145 aa9□□□□□ -0.97
TRAPPC1-207ENST00000575639 SPANXDQ9BXN6 97 aa9□□□□□ -0.97
TRAPPC1-207ENST00000575639 CBY1Q9Y3M2 126 aa9□□□□□ -0.97
TRAPPC1-207ENST00000575639 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
TRAPPC1-207ENST00000575639 KRTAP1-4P0C5Y4 121 aa8.99□□□□□ -0.97
TRAPPC1-207ENST00000575639 IFITM1P13164 125 aa8.99□□□□□ -0.97
TRAPPC1-207ENST00000575639 LINC00337Q8N6G1 96 aa8.99□□□□□ -0.97
TRAPPC1-207ENST00000575639 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
TRAPPC1-207ENST00000575639 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
TRAPPC1-207ENST00000575639 SPRR1AP35321 89 aa8.98□□□□□ -0.97
TRAPPC1-207ENST00000575639 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
TRAPPC1-207ENST00000575639 LINC00518Q8N0U6 118 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms