RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FLG2Q5D862 2391 aaPredicted RBP9.43□□□□□ -0.9
LITAF-217ENST00000575426 E9PLD3 99 aa9.42□□□□□ -0.9
LITAF-217ENST00000575426 SMIM13P0DJ93 91 aa9.42□□□□□ -0.9
LITAF-217ENST00000575426 AKR1D1P51857 326 aa9.42□□□□□ -0.9
LITAF-217ENST00000575426 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
LITAF-217ENST00000575426 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
LITAF-217ENST00000575426 C1orf137Q5JT78 98 aa9.42□□□□□ -0.9
LITAF-217ENST00000575426 MRPL55Q7Z7F7 128 aaKnown RBP9.42□□□□□ -0.9
LITAF-217ENST00000575426 HIST3H2BBQ8N257 126 aa9.42□□□□□ -0.9
LITAF-217ENST00000575426 HNRNPA3P51991 378 aaKnown RBP9.41□□□□□ -0.9
LITAF-217ENST00000575426 IGLV5-37A0A075B6J1 123 aa9.39□□□□□ -0.91
LITAF-217ENST00000575426 SNRPEP62304 92 aaKnown RBP9.38□□□□□ -0.91
LITAF-217ENST00000575426 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
LITAF-217ENST00000575426 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
LITAF-217ENST00000575426 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
LITAF-217ENST00000575426 HIST1H2BLQ99880 126 aa9.38□□□□□ -0.91
LITAF-217ENST00000575426 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
LITAF-217ENST00000575426 J3QL48 77 aa9.36□□□□□ -0.91
LITAF-217ENST00000575426 OXTP01178 125 aa9.36□□□□□ -0.91
LITAF-217ENST00000575426 VPREB1P12018 145 aa9.36□□□□□ -0.91
LITAF-217ENST00000575426 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
LITAF-217ENST00000575426 RPL37AP8A6NKH3 93 aa9.35□□□□□ -0.91
LITAF-217ENST00000575426 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
LITAF-217ENST00000575426 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
LITAF-217ENST00000575426 SRSF9Q13242 221 aaKnown RBP eCLIP9.34□□□□□ -0.91
LITAF-217ENST00000575426 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
LITAF-217ENST00000575426 A0A0J9YXY3 114 aa9.33□□□□□ -0.92
LITAF-217ENST00000575426 ZNF815PA8K554 130 aa9.33□□□□□ -0.92
LITAF-217ENST00000575426 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
LITAF-217ENST00000575426 BOD1L2Q8IYS8 172 aa9.33□□□□□ -0.92
LITAF-217ENST00000575426 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
LITAF-217ENST00000575426 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
LITAF-217ENST00000575426 DAND5Q8N907 189 aa9.32□□□□□ -0.92
LITAF-217ENST00000575426 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
LITAF-217ENST00000575426 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
LITAF-217ENST00000575426 M0R378 163 aa9.31□□□□□ -0.92
LITAF-217ENST00000575426 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
LITAF-217ENST00000575426 DIRC1Q969H9 104 aa9.31□□□□□ -0.92
LITAF-217ENST00000575426 IGLV1-50A0A075B6I6 118 aa9.3□□□□□ -0.92
LITAF-217ENST00000575426 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
LITAF-217ENST00000575426 BCE1O60756 84 aa9.29□□□□□ -0.92
LITAF-217ENST00000575426 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
LITAF-217ENST00000575426 Q8NDZ9 215 aa9.29□□□□□ -0.92
LITAF-217ENST00000575426 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
LITAF-217ENST00000575426 NCR3O14931 201 aa9.28□□□□□ -0.92
LITAF-217ENST00000575426 TIMM17BO60830 172 aa9.28□□□□□ -0.92
LITAF-217ENST00000575426 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
LITAF-217ENST00000575426 SCGB1D4Q6XE38 83 aa9.28□□□□□ -0.92
LITAF-217ENST00000575426 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
LITAF-217ENST00000575426 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
LITAF-217ENST00000575426 ZNF861PO60384 105 aa9.27□□□□□ -0.93
LITAF-217ENST00000575426 RPL28P46779 137 aaKnown RBP9.27□□□□□ -0.93
LITAF-217ENST00000575426 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
LITAF-217ENST00000575426 PKHD1L1Q86WI1 4243 aa9.27□□□□□ -0.93
LITAF-217ENST00000575426 H0Y9J4 135 aa9.26□□□□□ -0.93
LITAF-217ENST00000575426 UBE2AP49459 152 aa9.26□□□□□ -0.93
LITAF-217ENST00000575426 NPC2P61916 151 aa9.26□□□□□ -0.93
LITAF-217ENST00000575426 S100A12P80511 92 aa9.26□□□□□ -0.93
LITAF-217ENST00000575426 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
LITAF-217ENST00000575426 NDUFC2O95298 119 aa9.24□□□□□ -0.93
LITAF-217ENST00000575426 LINC01600Q96MT4 127 aa9.24□□□□□ -0.93
LITAF-217ENST00000575426 TMEM126AQ9H061 195 aa9.24□□□□□ -0.93
LITAF-217ENST00000575426 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
LITAF-217ENST00000575426 TRBV10-2A0A0K0K1G8 114 aa9.23□□□□□ -0.93
LITAF-217ENST00000575426 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
LITAF-217ENST00000575426 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
LITAF-217ENST00000575426 SPANXB1Q9NS25 103 aaPredicted RBP9.23□□□□□ -0.93
LITAF-217ENST00000575426 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
LITAF-217ENST00000575426 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
LITAF-217ENST00000575426 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
LITAF-217ENST00000575426 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
LITAF-217ENST00000575426 LITAFQ99732 161 aa9.22□□□□□ -0.93
LITAF-217ENST00000575426 PRYO14603 147 aa9.21□□□□□ -0.94
LITAF-217ENST00000575426 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
LITAF-217ENST00000575426 TRBV10-3A0A0K0K1G6 114 aa9.2□□□□□ -0.94
LITAF-217ENST00000575426 DDTP30046 118 aa9.2□□□□□ -0.94
LITAF-217ENST00000575426 SPANXDQ9BXN6 97 aa9.2□□□□□ -0.94
LITAF-217ENST00000575426 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
LITAF-217ENST00000575426 KCNQ1DNQ9H478 68 aa9.19□□□□□ -0.94
LITAF-217ENST00000575426 TMA7Q9Y2S6 64 aaKnown RBP9.19□□□□□ -0.94
LITAF-217ENST00000575426 PRLHP81277 87 aa9.18□□□□□ -0.94
LITAF-217ENST00000575426 Q6ZVH6 145 aa9.18□□□□□ -0.94
LITAF-217ENST00000575426 CBY1Q9Y3M2 126 aa9.18□□□□□ -0.94
LITAF-217ENST00000575426 ETDCA0A1B0GVM5 59 aa9.17□□□□□ -0.94
LITAF-217ENST00000575426 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
LITAF-217ENST00000575426 IFITM1P13164 125 aa9.17□□□□□ -0.94
LITAF-217ENST00000575426 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
LITAF-217ENST00000575426 MT1HL1P0DM35 61 aa9.16□□□□□ -0.94
LITAF-217ENST00000575426 KRTAP13-1Q8IUC0 172 aa9.16□□□□□ -0.94
LITAF-217ENST00000575426 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
LITAF-217ENST00000575426 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
LITAF-217ENST00000575426 LINC00337Q8N6G1 96 aa9.15□□□□□ -0.94
LITAF-217ENST00000575426 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
LITAF-217ENST00000575426 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
LITAF-217ENST00000575426 KRTAP10-8P60410 259 aa9.14□□□□□ -0.95
LITAF-217ENST00000575426 JOSD1Q15040 202 aaPredicted RBP9.14□□□□□ -0.95
LITAF-217ENST00000575426 HIGD2AQ9BW72 106 aa9.14□□□□□ -0.95
LITAF-217ENST00000575426 SPRR1AP35321 89 aa9.13□□□□□ -0.95
LITAF-217ENST00000575426 MUSTN1Q8IVN3 82 aa9.13□□□□□ -0.95
LITAF-217ENST00000575426 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms