RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 PKIGQ9Y2B9 76 aa4.56□□□□□ -1.68
SMG6-217ENST00000575338 FBN1P35555 2871 aaKnown RBP4.55□□□□□ -1.68
SMG6-217ENST00000575338 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
SMG6-217ENST00000575338 SYCNQ0VAF6 134 aa4.55□□□□□ -1.68
SMG6-217ENST00000575338 KRTAP26-1Q6PEX3 210 aa4.55□□□□□ -1.68
SMG6-217ENST00000575338 C6orf223Q8N319 242 aa4.55□□□□□ -1.68
SMG6-217ENST00000575338 C6orf48Q9UBA6 75 aa4.55□□□□□ -1.68
SMG6-217ENST00000575338 LINC00588Q9Y4M8 146 aa4.55□□□□□ -1.68
SMG6-217ENST00000575338 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
SMG6-217ENST00000575338 JMJD7-PLA2G4BH0Y9G9 81 aa4.54□□□□□ -1.68
SMG6-217ENST00000575338 TMEM256-PLSCR3K7ERE1 68 aa4.54□□□□□ -1.68
SMG6-217ENST00000575338 TLX1NBP0CAT3 122 aa4.54□□□□□ -1.68
SMG6-217ENST00000575338 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
SMG6-217ENST00000575338 UBE2DNLQ8IWF7 75 aa4.54□□□□□ -1.68
SMG6-217ENST00000575338 C15orf56Q8N910 161 aa4.54□□□□□ -1.68
SMG6-217ENST00000575338 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 TEX49A0A1B0GTD5 131 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 M0R378 163 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 NCR3O14931 201 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 LECT2O14960 151 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 IGLV6-57P01721 117 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 PRB2P02812 416 aaPredicted RBP4.53□□□□□ -1.68
SMG6-217ENST00000575338 PCP4P48539 62 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 HIGD2BQ4VC39 106 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 C14orf177Q52M58 125 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 TTC32Q5I0X7 151 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 C10orf25Q5T742 122 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 Q8N814 137 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 DIRC1Q969H9 104 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 Q9HAA7 133 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 CMYA5Q8N3K9 4069 aa4.53□□□□□ -1.68
SMG6-217ENST00000575338 TRAV23DV6A0A075B6W5 121 aa4.52□□□□□ -1.69
SMG6-217ENST00000575338 C6orf99Q4VX62 202 aa4.52□□□□□ -1.69
SMG6-217ENST00000575338 Q6ZRU5 148 aa4.52□□□□□ -1.69
SMG6-217ENST00000575338 LINC00167Q96N53 147 aa4.52□□□□□ -1.69
SMG6-217ENST00000575338 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
SMG6-217ENST00000575338 A0A087WYN8 130 aa4.51□□□□□ -1.69
SMG6-217ENST00000575338 hADV29S1A0JD25 119 aa4.51□□□□□ -1.69
SMG6-217ENST00000575338 RPL18AQ02543 176 aaKnown RBP4.51□□□□□ -1.69
SMG6-217ENST00000575338 NKAPP1Q8N9T2 125 aa4.51□□□□□ -1.69
SMG6-217ENST00000575338 LINC00526Q96FQ7 95 aa4.51□□□□□ -1.69
SMG6-217ENST00000575338 FAM218AQ96MZ4 157 aa4.51□□□□□ -1.69
SMG6-217ENST00000575338 NBEAL1Q6ZS30 2694 aa4.5□□□□□ -1.69
SMG6-217ENST00000575338 USP17L23D6RBM5 183 aa4.5□□□□□ -1.69
SMG6-217ENST00000575338 PSCAO43653 123 aa4.5□□□□□ -1.69
SMG6-217ENST00000575338 LINC00575Q6W349 94 aa4.5□□□□□ -1.69
SMG6-217ENST00000575338 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
SMG6-217ENST00000575338 XAGE1AQ9HD64 81 aa4.5□□□□□ -1.69
SMG6-217ENST00000575338 TRBV10-3A0A0K0K1G6 114 aa4.49□□□□□ -1.69
SMG6-217ENST00000575338 LOC107984640A0A0U1RRK4 108 aa4.49□□□□□ -1.69
SMG6-217ENST00000575338 ZNF73O43830 326 aaPredicted RBP4.49□□□□□ -1.69
SMG6-217ENST00000575338 VPREB1P12018 145 aa4.49□□□□□ -1.69
SMG6-217ENST00000575338 PDE6GP18545 87 aa4.49□□□□□ -1.69
SMG6-217ENST00000575338 COX7BP24311 80 aa4.49□□□□□ -1.69
SMG6-217ENST00000575338 GAGE2EQ4V326 116 aa4.49□□□□□ -1.69
SMG6-217ENST00000575338 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
SMG6-217ENST00000575338 GAGE2DQ9UEU5 116 aa4.49□□□□□ -1.69
SMG6-217ENST00000575338 PRR3P79522 188 aaKnown RBP4.48□□□□□ -1.69
SMG6-217ENST00000575338 Q6Q795 121 aa4.48□□□□□ -1.69
SMG6-217ENST00000575338 OBSCN-AS1Q96MR7 158 aa4.48□□□□□ -1.69
SMG6-217ENST00000575338 APLNQ9ULZ1 77 aa4.48□□□□□ -1.69
SMG6-217ENST00000575338 ANK2Q01484 3957 aa4.48□□□□□ -1.69
SMG6-217ENST00000575338 PKD1L1Q8TDX9 2849 aa4.48□□□□□ -1.69
SMG6-217ENST00000575338 IGLV5-37A0A075B6J1 123 aa4.47□□□□□ -1.69
SMG6-217ENST00000575338 ELOF1P60002 83 aaKnown RBP4.47□□□□□ -1.69
SMG6-217ENST00000575338 GAGE2BQ13066 116 aa4.47□□□□□ -1.69
SMG6-217ENST00000575338 Q6ZRP5 223 aa4.47□□□□□ -1.69
SMG6-217ENST00000575338 LINC00643Q86TS7 51 aa4.47□□□□□ -1.69
SMG6-217ENST00000575338 IMUPQ9GZP8 106 aa4.47□□□□□ -1.69
SMG6-217ENST00000575338 PRYO14603 147 aa4.46□□□□□ -1.7
SMG6-217ENST00000575338 XGP55808 180 aa4.46□□□□□ -1.7
SMG6-217ENST00000575338 CNBPP62633 177 aaKnown RBP4.46□□□□□ -1.7
SMG6-217ENST00000575338 GAGE2AQ6NT46 116 aa4.46□□□□□ -1.7
SMG6-217ENST00000575338 A0A1B0GV72 72 aa4.45□□□□□ -1.7
SMG6-217ENST00000575338 RBM3P98179 157 aaKnown RBP4.45□□□□□ -1.7
SMG6-217ENST00000575338 DSCR8Q96T75 97 aa4.45□□□□□ -1.7
SMG6-217ENST00000575338 KCNQ1DNQ9H478 68 aa4.45□□□□□ -1.7
SMG6-217ENST00000575338 DHRS4-AS1Q9P1J3 65 aa4.45□□□□□ -1.7
SMG6-217ENST00000575338 LAMTOR3Q9UHA4 124 aa4.45□□□□□ -1.7
SMG6-217ENST00000575338 TENM3Q9P273 2699 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 SLPIP03973 132 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 CCKP06307 115 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 C9orf129Q5T035 196 aaKnown RBP4.44□□□□□ -1.7
SMG6-217ENST00000575338 ATP5EP2Q5VTU8 51 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 Q6ZQY7 126 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 Q8NDZ9 215 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 C14orf132Q9NPU4 83 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 LINC00474Q9P2X8 69 aa4.44□□□□□ -1.7
SMG6-217ENST00000575338 LOC110117498A0A087WWA1 95 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 TRBV7-7A0A0K0K1E9 115 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 NBDYA0A0U1RRE5 68 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 ETDCA0A1B0GVM5 59 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 C16orf90A8MZG2 172 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 LINC00528Q8N1L1 170 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 C22orf24Q9Y442 160 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 NOTCH1P46531 2555 aa4.43□□□□□ -1.7
SMG6-217ENST00000575338 SDIM1Q6ZPB5 146 aa4.42□□□□□ -1.7
SMG6-217ENST00000575338 MRPL55Q7Z7F7 128 aaKnown RBP4.42□□□□□ -1.7
SMG6-217ENST00000575338 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms