RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
TMEM88-202ENST00000574668 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
TMEM88-202ENST00000574668 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
TMEM88-202ENST00000574668 HSBP1L1C9JCN9 74 aa10.48□□□□□ -0.73
TMEM88-202ENST00000574668 C9orf129Q5T035 196 aaKnown RBP10.48□□□□□ -0.73
TMEM88-202ENST00000574668 SMIM13P0DJ93 91 aa10.47□□□□□ -0.73
TMEM88-202ENST00000574668 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
TMEM88-202ENST00000574668 LOC105371267A0A1B0GV96 52 aa10.46□□□□□ -0.73
TMEM88-202ENST00000574668 FAM168BA1KXE4 195 aa10.46□□□□□ -0.73
TMEM88-202ENST00000574668 ANKRD39Q53RE8 183 aa10.46□□□□□ -0.73
TMEM88-202ENST00000574668 C7orf33Q8WU49 177 aa10.46□□□□□ -0.73
TMEM88-202ENST00000574668 IGKV2D-26A0A0A0MRZ7 120 aa10.45□□□□□ -0.74
TMEM88-202ENST00000574668 OXTP01178 125 aa10.45□□□□□ -0.74
TMEM88-202ENST00000574668 ZNF815PA8K554 130 aa10.44□□□□□ -0.74
TMEM88-202ENST00000574668 SND1-IT1Q9HBX3 110 aa10.44□□□□□ -0.74
TMEM88-202ENST00000574668 PLA2G2DQ9UNK4 145 aa10.44□□□□□ -0.74
TMEM88-202ENST00000574668 A0A0J9YXY3 114 aa10.42□□□□□ -0.74
TMEM88-202ENST00000574668 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
TMEM88-202ENST00000574668 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
TMEM88-202ENST00000574668 MIR7-3HGQ8N6C7 128 aa10.42□□□□□ -0.74
TMEM88-202ENST00000574668 M0QXV9 152 aa10.41□□□□□ -0.74
TMEM88-202ENST00000574668 TTTY13Q9BZ97 58 aa10.41□□□□□ -0.74
TMEM88-202ENST00000574668 RPL37AP61513 92 aaKnown RBP10.4□□□□□ -0.74
TMEM88-202ENST00000574668 JOSD1Q15040 202 aaPredicted RBP10.4□□□□□ -0.74
TMEM88-202ENST00000574668 RPL24P83731 157 aaKnown RBP10.39□□□□□ -0.75
TMEM88-202ENST00000574668 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
TMEM88-202ENST00000574668 C22orf24Q9Y442 160 aa10.39□□□□□ -0.75
TMEM88-202ENST00000574668 UBE2BP63146 152 aa10.38□□□□□ -0.75
TMEM88-202ENST00000574668 LBHQ53QV2 105 aaPredicted RBP10.38□□□□□ -0.75
TMEM88-202ENST00000574668 SCGB1D4Q6XE38 83 aa10.38□□□□□ -0.75
TMEM88-202ENST00000574668 KRTAP7-1Q8IUC3 87 aa10.38□□□□□ -0.75
TMEM88-202ENST00000574668 DAND5Q8N907 189 aa10.38□□□□□ -0.75
TMEM88-202ENST00000574668 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
TMEM88-202ENST00000574668 TIMM17BO60830 172 aa10.36□□□□□ -0.75
TMEM88-202ENST00000574668 MIEN1Q9BRT3 115 aa10.36□□□□□ -0.75
TMEM88-202ENST00000574668 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
TMEM88-202ENST00000574668 IGLV5-37A0A075B6J1 123 aa10.35□□□□□ -0.75
TMEM88-202ENST00000574668 MRPL55Q7Z7F7 128 aaKnown RBP10.35□□□□□ -0.75
TMEM88-202ENST00000574668 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
TMEM88-202ENST00000574668 VPREB1P12018 145 aa10.34□□□□□ -0.75
TMEM88-202ENST00000574668 VAMP8Q9BV40 100 aa10.34□□□□□ -0.75
TMEM88-202ENST00000574668 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
TMEM88-202ENST00000574668 NPC2P61916 151 aa10.33□□□□□ -0.76
TMEM88-202ENST00000574668 ADAMTSL4-AS1Q5T5F5 129 aa10.33□□□□□ -0.76
TMEM88-202ENST00000574668 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
TMEM88-202ENST00000574668 SPATA45Q537H7 98 aa10.32□□□□□ -0.76
TMEM88-202ENST00000574668 LINC00167Q96N53 147 aa10.32□□□□□ -0.76
TMEM88-202ENST00000574668 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
TMEM88-202ENST00000574668 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
TMEM88-202ENST00000574668 PYY3Q5JQD4 70 aa10.31□□□□□ -0.76
TMEM88-202ENST00000574668 LITAFQ99732 161 aa10.31□□□□□ -0.76
TMEM88-202ENST00000574668 LOC107984156A0A0G2JMH3 177 aa10.3□□□□□ -0.76
TMEM88-202ENST00000574668 PRR3P79522 188 aaKnown RBP10.3□□□□□ -0.76
TMEM88-202ENST00000574668 ARL17AQ8IVW1 177 aa10.3□□□□□ -0.76
TMEM88-202ENST00000574668 PSORS1C2Q9UIG4 136 aa10.3□□□□□ -0.76
TMEM88-202ENST00000574668 RPL37AP8A6NKH3 93 aa10.29□□□□□ -0.76
TMEM88-202ENST00000574668 M0R378 163 aa10.29□□□□□ -0.76
TMEM88-202ENST00000574668 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
TMEM88-202ENST00000574668 Q8NDZ9 215 aa10.29□□□□□ -0.76
TMEM88-202ENST00000574668 LINC00308Q8TCZ7 52 aa10.29□□□□□ -0.76
TMEM88-202ENST00000574668 NCR3O14931 201 aa10.28□□□□□ -0.76
TMEM88-202ENST00000574668 COX8AP10176 69 aa10.28□□□□□ -0.76
TMEM88-202ENST00000574668 COPS9Q8WXC6 57 aa10.28□□□□□ -0.76
TMEM88-202ENST00000574668 SPANXDQ9BXN6 97 aa10.28□□□□□ -0.76
TMEM88-202ENST00000574668 SPANXCQ9NY87 97 aa10.28□□□□□ -0.76
TMEM88-202ENST00000574668 SOSTDC1Q6X4U4 206 aa10.27□□□□□ -0.77
TMEM88-202ENST00000574668 KRTAP11-1Q8IUC1 163 aa10.27□□□□□ -0.77
TMEM88-202ENST00000574668 S100A12P80511 92 aa10.26□□□□□ -0.77
TMEM88-202ENST00000574668 Q6ZVH6 145 aa10.26□□□□□ -0.77
TMEM88-202ENST00000574668 C14orf144Q96I85 54 aa10.26□□□□□ -0.77
TMEM88-202ENST00000574668 IGKV2-28A0A075B6P5 120 aa10.25□□□□□ -0.77
TMEM88-202ENST00000574668 NDUFC2O95298 119 aa10.25□□□□□ -0.77
TMEM88-202ENST00000574668 IGKV2D-28P01615 120 aa10.25□□□□□ -0.77
TMEM88-202ENST00000574668 IFITM1P13164 125 aa10.25□□□□□ -0.77
TMEM88-202ENST00000574668 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM88-202ENST00000574668 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
TMEM88-202ENST00000574668 DLEU1O43261 78 aa10.24□□□□□ -0.77
TMEM88-202ENST00000574668 TNXBP22105 4242 aa10.24□□□□□ -0.77
TMEM88-202ENST00000574668 RNF213Q63HN8 5207 aa10.23□□□□□ -0.77
TMEM88-202ENST00000574668 IGLV1-50A0A075B6I6 118 aa10.23□□□□□ -0.77
TMEM88-202ENST00000574668 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
TMEM88-202ENST00000574668 EIF4EBP3O60516 100 aaPredicted RBP10.23□□□□□ -0.77
TMEM88-202ENST00000574668 SLC25A34Q6PIV7 304 aa10.23□□□□□ -0.77
TMEM88-202ENST00000574668 MUSTN1Q8IVN3 82 aa10.22□□□□□ -0.77
TMEM88-202ENST00000574668 IGLV7-43P04211 117 aa10.21□□□□□ -0.77
TMEM88-202ENST00000574668 S100A7L2Q5SY68 101 aa10.21□□□□□ -0.77
TMEM88-202ENST00000574668 LRP2P98164 4655 aa10.21□□□□□ -0.78
TMEM88-202ENST00000574668 DDTP30046 118 aa10.2□□□□□ -0.78
TMEM88-202ENST00000574668 CTAG1AP78358 180 aa10.2□□□□□ -0.78
TMEM88-202ENST00000574668 REG3GQ6UW15 175 aa10.2□□□□□ -0.78
TMEM88-202ENST00000574668 TRBV10-3A0A0K0K1G6 114 aa10.19□□□□□ -0.78
TMEM88-202ENST00000574668 BCE1O60756 84 aa10.19□□□□□ -0.78
TMEM88-202ENST00000574668 LINC00518Q8N0U6 118 aa10.19□□□□□ -0.78
TMEM88-202ENST00000574668 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
TMEM88-202ENST00000574668 PPDPFQ9H3Y8 114 aa10.19□□□□□ -0.78
TMEM88-202ENST00000574668 PRYO14603 147 aa10.18□□□□□ -0.78
TMEM88-202ENST00000574668 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
TMEM88-202ENST00000574668 OR13C6PQ8NH95 151 aa10.18□□□□□ -0.78
TMEM88-202ENST00000574668 UBE2AP49459 152 aa10.17□□□□□ -0.78
TMEM88-202ENST00000574668 TMEM126AQ9H061 195 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms