RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 UBE2BP63146 152 aa6.02□□□□□ -1.45
NDE1-210ENST00000574163 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
NDE1-210ENST00000574163 ATP6V1G1O75348 118 aa6.01□□□□□ -1.45
NDE1-210ENST00000574163 HERVK_113P61574 105 aa6.01□□□□□ -1.45
NDE1-210ENST00000574163 SRSF9Q13242 221 aaKnown RBP eCLIP6.01□□□□□ -1.45
NDE1-210ENST00000574163 C1orf137Q5JT78 98 aa6.01□□□□□ -1.45
NDE1-210ENST00000574163 MRPL55Q7Z7F7 128 aaKnown RBP6.01□□□□□ -1.45
NDE1-210ENST00000574163 PLEKHB2Q96CS7 222 aa6.01□□□□□ -1.45
NDE1-210ENST00000574163 C22orf24Q9Y442 160 aa6.01□□□□□ -1.45
NDE1-210ENST00000574163 FAT3Q8TDW7 4589 aa6.01□□□□□ -1.45
NDE1-210ENST00000574163 IGKCP01834 107 aa6□□□□□ -1.45
NDE1-210ENST00000574163 IGLV7-43P04211 117 aa6□□□□□ -1.45
NDE1-210ENST00000574163 PFN2P35080 140 aa6□□□□□ -1.45
NDE1-210ENST00000574163 REG3GQ6UW15 175 aa6□□□□□ -1.45
NDE1-210ENST00000574163 KRTAP11-1Q8IUC1 163 aa6□□□□□ -1.45
NDE1-210ENST00000574163 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
NDE1-210ENST00000574163 NDUFA12Q9UI09 145 aa6□□□□□ -1.45
NDE1-210ENST00000574163 HERC1Q15751 4861 aa6□□□□□ -1.45
NDE1-210ENST00000574163 MYMXA0A1B0GTQ4 84 aa5.99□□□□□ -1.45
NDE1-210ENST00000574163 LINC00587B1AMM8 73 aa5.99□□□□□ -1.45
NDE1-210ENST00000574163 SYS1-DBNDD2H3BUS1 97 aa5.99□□□□□ -1.45
NDE1-210ENST00000574163 LEPROTO15243 131 aa5.99□□□□□ -1.45
NDE1-210ENST00000574163 NMUP48645 174 aa5.99□□□□□ -1.45
NDE1-210ENST00000574163 NKAPP1Q8N9T2 125 aa5.99□□□□□ -1.45
NDE1-210ENST00000574163 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
NDE1-210ENST00000574163 VPREB1P12018 145 aa5.98□□□□□ -1.45
NDE1-210ENST00000574163 RPL24P83731 157 aaKnown RBP5.98□□□□□ -1.45
NDE1-210ENST00000574163 LINC01545Q5VT33 79 aa5.98□□□□□ -1.45
NDE1-210ENST00000574163 PET117Q6UWS5 81 aa5.98□□□□□ -1.45
NDE1-210ENST00000574163 DIRC1Q969H9 104 aa5.98□□□□□ -1.45
NDE1-210ENST00000574163 PMCHL2Q9BQD1 86 aa5.98□□□□□ -1.45
NDE1-210ENST00000574163 J3QQQ9 107 aa5.97□□□□□ -1.45
NDE1-210ENST00000574163 LINC00158P58513 81 aa5.97□□□□□ -1.45
NDE1-210ENST00000574163 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
NDE1-210ENST00000574163 LINC01600Q96MT4 127 aa5.97□□□□□ -1.45
NDE1-210ENST00000574163 E9PLD3 99 aa5.96□□□□□ -1.46
NDE1-210ENST00000574163 H0Y9J4 135 aa5.96□□□□□ -1.46
NDE1-210ENST00000574163 MEIG1Q5JSS6 88 aa5.96□□□□□ -1.46
NDE1-210ENST00000574163 LINC00167Q96N53 147 aa5.96□□□□□ -1.46
NDE1-210ENST00000574163 BCE1O60756 84 aa5.95□□□□□ -1.46
NDE1-210ENST00000574163 C3orf79P0CE67 100 aa5.95□□□□□ -1.46
NDE1-210ENST00000574163 SMIM13P0DJ93 91 aa5.95□□□□□ -1.46
NDE1-210ENST00000574163 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
NDE1-210ENST00000574163 C20orf202A1L168 122 aa5.94□□□□□ -1.46
NDE1-210ENST00000574163 AKR1D1P51857 326 aa5.94□□□□□ -1.46
NDE1-210ENST00000574163 MIR7-3HGQ8N6C7 128 aa5.94□□□□□ -1.46
NDE1-210ENST00000574163 LOC107984156A0A0G2JMH3 177 aa5.93□□□□□ -1.46
NDE1-210ENST00000574163 GAGE10A6NGK3 116 aa5.93□□□□□ -1.46
NDE1-210ENST00000574163 ZNF861PO60384 105 aa5.93□□□□□ -1.46
NDE1-210ENST00000574163 RPL28P46779 137 aaKnown RBP5.93□□□□□ -1.46
NDE1-210ENST00000574163 ARL17AQ8IVW1 177 aa5.93□□□□□ -1.46
NDE1-210ENST00000574163 Q8NDZ9 215 aa5.93□□□□□ -1.46
NDE1-210ENST00000574163 TNXBP22105 4242 aa5.92□□□□□ -1.46
NDE1-210ENST00000574163 IGLV1-50A0A075B6I6 118 aa5.92□□□□□ -1.46
NDE1-210ENST00000574163 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
NDE1-210ENST00000574163 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
NDE1-210ENST00000574163 RPL37AP8A6NKH3 93 aa5.92□□□□□ -1.46
NDE1-210ENST00000574163 KRTDAPP60985 99 aa5.92□□□□□ -1.46
NDE1-210ENST00000574163 XP32Q5T750 250 aa5.92□□□□□ -1.46
NDE1-210ENST00000574163 IGKV2-28A0A075B6P5 120 aa5.91□□□□□ -1.46
NDE1-210ENST00000574163 M0R378 163 aa5.91□□□□□ -1.46
NDE1-210ENST00000574163 IGKV2D-28P01615 120 aa5.91□□□□□ -1.46
NDE1-210ENST00000574163 KRTAP13-1Q8IUC0 172 aa5.91□□□□□ -1.46
NDE1-210ENST00000574163 BOD1L2Q8IYS8 172 aa5.91□□□□□ -1.46
NDE1-210ENST00000574163 TIMM17BO60830 172 aa5.9□□□□□ -1.46
NDE1-210ENST00000574163 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
NDE1-210ENST00000574163 KRTAP10-8P60410 259 aa5.9□□□□□ -1.46
NDE1-210ENST00000574163 HIST3H2BBQ8N257 126 aa5.9□□□□□ -1.46
NDE1-210ENST00000574163 TMEM126AQ9H061 195 aa5.9□□□□□ -1.46
NDE1-210ENST00000574163 A0A0J9YXY3 114 aa5.89□□□□□ -1.47
NDE1-210ENST00000574163 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
NDE1-210ENST00000574163 UBE2AP49459 152 aa5.89□□□□□ -1.47
NDE1-210ENST00000574163 MIEN1Q9BRT3 115 aa5.89□□□□□ -1.47
NDE1-210ENST00000574163 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
NDE1-210ENST00000574163 ZNF815PA8K554 130 aa5.88□□□□□ -1.47
NDE1-210ENST00000574163 PRYO14603 147 aa5.88□□□□□ -1.47
NDE1-210ENST00000574163 NDUFC2O95298 119 aa5.88□□□□□ -1.47
NDE1-210ENST00000574163 S100A6P06703 90 aa5.88□□□□□ -1.47
NDE1-210ENST00000574163 S100A2P29034 98 aa5.88□□□□□ -1.47
NDE1-210ENST00000574163 RPL13AP40429 203 aaKnown RBP5.88□□□□□ -1.47
NDE1-210ENST00000574163 HIST1H2BLQ99880 126 aa5.88□□□□□ -1.47
NDE1-210ENST00000574163 TMEM238C9JI98 176 aa5.87□□□□□ -1.47
NDE1-210ENST00000574163 NCR3O14931 201 aa5.87□□□□□ -1.47
NDE1-210ENST00000574163 SNRPEP62304 92 aaKnown RBP5.87□□□□□ -1.47
NDE1-210ENST00000574163 DAND5Q8N907 189 aa5.87□□□□□ -1.47
NDE1-210ENST00000574163 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
NDE1-210ENST00000574163 SPRR1AP35321 89 aa5.86□□□□□ -1.47
NDE1-210ENST00000574163 LITAFQ99732 161 aa5.86□□□□□ -1.47
NDE1-210ENST00000574163 S100A12P80511 92 aa5.85□□□□□ -1.47
NDE1-210ENST00000574163 ADAMTSL4-AS1Q5T5F5 129 aa5.85□□□□□ -1.47
NDE1-210ENST00000574163 SOSTDC1Q6X4U4 206 aa5.85□□□□□ -1.47
NDE1-210ENST00000574163 FAM19A1Q7Z5A9 133 aa5.85□□□□□ -1.47
NDE1-210ENST00000574163 LINC00337Q8N6G1 96 aa5.85□□□□□ -1.47
NDE1-210ENST00000574163 TRBV10-3A0A0K0K1G6 114 aa5.84□□□□□ -1.47
NDE1-210ENST00000574163 PRLHP81277 87 aa5.84□□□□□ -1.47
NDE1-210ENST00000574163 PRR26Q8N8Z3 221 aa5.84□□□□□ -1.47
NDE1-210ENST00000574163 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
NDE1-210ENST00000574163 C9orf118A6NHY6 69 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 KRTAP4-16G5E9R7 235 aaPredicted RBP5.83□□□□□ -1.48
NDE1-210ENST00000574163 IGLV6-57P01721 117 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms