RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 SMIM13P0DJ93 91 aa10.71□□□□□ -0.69
LITAF-212ENST00000573332 PRR3P79522 188 aaKnown RBP10.71□□□□□ -0.69
LITAF-212ENST00000573332 LBHQ53QV2 105 aaPredicted RBP10.7□□□□□ -0.7
LITAF-212ENST00000573332 SRRM2Q9UQ35 2752 aaKnown RBP10.69□□□□□ -0.7
LITAF-212ENST00000573332 A0A0U1RRA0 63 aa10.69□□□□□ -0.7
LITAF-212ENST00000573332 IGKV2D-26A0A0A0MRZ7 120 aa10.68□□□□□ -0.7
LITAF-212ENST00000573332 MIR7-3HGQ8N6C7 128 aa10.68□□□□□ -0.7
LITAF-212ENST00000573332 PSORS1C2Q9UIG4 136 aa10.68□□□□□ -0.7
LITAF-212ENST00000573332 VPREB1P12018 145 aa10.67□□□□□ -0.7
LITAF-212ENST00000573332 RPL24P83731 157 aaKnown RBP10.67□□□□□ -0.7
LITAF-212ENST00000573332 MRPL55Q7Z7F7 128 aaKnown RBP10.67□□□□□ -0.7
LITAF-212ENST00000573332 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
LITAF-212ENST00000573332 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
LITAF-212ENST00000573332 A0A0J9YXY3 114 aa10.66□□□□□ -0.7
LITAF-212ENST00000573332 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
LITAF-212ENST00000573332 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
LITAF-212ENST00000573332 LOC107984156A0A0G2JMH3 177 aa10.65□□□□□ -0.7
LITAF-212ENST00000573332 UBE2BP63146 152 aa10.65□□□□□ -0.7
LITAF-212ENST00000573332 ARL17AQ8IVW1 177 aa10.65□□□□□ -0.7
LITAF-212ENST00000573332 NKAPP1Q8N9T2 125 aa10.65□□□□□ -0.7
LITAF-212ENST00000573332 PCLOQ9Y6V0 5065 aa10.64□□□□□ -0.71
LITAF-212ENST00000573332 LINC00167Q96N53 147 aa10.64□□□□□ -0.71
LITAF-212ENST00000573332 ZNF815PA8K554 130 aa10.63□□□□□ -0.71
LITAF-212ENST00000573332 Q8NDZ9 215 aa10.63□□□□□ -0.71
LITAF-212ENST00000573332 TIMM17BO60830 172 aa10.62□□□□□ -0.71
LITAF-212ENST00000573332 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
LITAF-212ENST00000573332 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
LITAF-212ENST00000573332 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
LITAF-212ENST00000573332 SCGB1D1O95968 90 aa10.6□□□□□ -0.71
LITAF-212ENST00000573332 ADAMTSL4-AS1Q5T5F5 129 aa10.6□□□□□ -0.71
LITAF-212ENST00000573332 BOD1L2Q8IYS8 172 aa10.6□□□□□ -0.71
LITAF-212ENST00000573332 DAND5Q8N907 189 aa10.6□□□□□ -0.71
LITAF-212ENST00000573332 LITAFQ99732 161 aa10.6□□□□□ -0.71
LITAF-212ENST00000573332 HSBP1L1C9JCN9 74 aa10.59□□□□□ -0.71
LITAF-212ENST00000573332 SPINK6Q6UWN8 80 aa10.59□□□□□ -0.71
LITAF-212ENST00000573332 GAGE10A6NGK3 116 aa10.58□□□□□ -0.72
LITAF-212ENST00000573332 M0R378 163 aa10.58□□□□□ -0.72
LITAF-212ENST00000573332 IGLV7-43P04211 117 aa10.58□□□□□ -0.72
LITAF-212ENST00000573332 IGLV1-50A0A075B6I6 118 aa10.57□□□□□ -0.72
LITAF-212ENST00000573332 RPL37AP8A6NKH3 93 aa10.57□□□□□ -0.72
LITAF-212ENST00000573332 PCP2Q8IVA1 136 aa10.57□□□□□ -0.72
LITAF-212ENST00000573332 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
LITAF-212ENST00000573332 NDUFC2O95298 119 aa10.56□□□□□ -0.72
LITAF-212ENST00000573332 PKHD1L1Q86WI1 4243 aa10.56□□□□□ -0.72
LITAF-212ENST00000573332 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
LITAF-212ENST00000573332 SOSTDC1Q6X4U4 206 aa10.55□□□□□ -0.72
LITAF-212ENST00000573332 TMA7Q9Y2S6 64 aaKnown RBP10.55□□□□□ -0.72
LITAF-212ENST00000573332 KRTAP29-1A8MX34 341 aaPredicted RBP10.54□□□□□ -0.72
LITAF-212ENST00000573332 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
LITAF-212ENST00000573332 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
LITAF-212ENST00000573332 IGKV2-28A0A075B6P5 120 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 TRBV10-2A0A0K0K1G8 114 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 TMEM238C9JI98 176 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 EIF4EBP3O60516 100 aaPredicted RBP10.53□□□□□ -0.72
LITAF-212ENST00000573332 BCE1O60756 84 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 OXTP01178 125 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 IGKV2D-28P01615 120 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 LINC00308Q8TCZ7 52 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 SPANXDQ9BXN6 97 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
LITAF-212ENST00000573332 ZNF861PO60384 105 aa10.51□□□□□ -0.73
LITAF-212ENST00000573332 Q6ZVH6 145 aa10.51□□□□□ -0.73
LITAF-212ENST00000573332 PPDPFQ9H3Y8 114 aa10.51□□□□□ -0.73
LITAF-212ENST00000573332 SPANXB1Q9NS25 103 aaPredicted RBP10.51□□□□□ -0.73
LITAF-212ENST00000573332 MYCBP2O75592 4640 aa10.5□□□□□ -0.73
LITAF-212ENST00000573332 NCR3O14931 201 aa10.5□□□□□ -0.73
LITAF-212ENST00000573332 NPC2P61916 151 aa10.5□□□□□ -0.73
LITAF-212ENST00000573332 DIRC1Q969H9 104 aa10.5□□□□□ -0.73
LITAF-212ENST00000573332 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
LITAF-212ENST00000573332 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
LITAF-212ENST00000573332 IFITM1P13164 125 aa10.48□□□□□ -0.73
LITAF-212ENST00000573332 KCNQ1DNQ9H478 68 aa10.48□□□□□ -0.73
LITAF-212ENST00000573332 TRBV10-3A0A0K0K1G6 114 aa10.47□□□□□ -0.73
LITAF-212ENST00000573332 H0Y9J4 135 aa10.47□□□□□ -0.73
LITAF-212ENST00000573332 PRYO14603 147 aa10.47□□□□□ -0.73
LITAF-212ENST00000573332 RPL28P46779 137 aaKnown RBP10.47□□□□□ -0.73
LITAF-212ENST00000573332 KRTAP13-1Q8IUC0 172 aa10.47□□□□□ -0.73
LITAF-212ENST00000573332 COPS9Q8WXC6 57 aa10.47□□□□□ -0.73
LITAF-212ENST00000573332 COX8AP10176 69 aa10.46□□□□□ -0.73
LITAF-212ENST00000573332 DLEU1O43261 78 aa10.45□□□□□ -0.74
LITAF-212ENST00000573332 IGLV6-57P01721 117 aa10.45□□□□□ -0.74
LITAF-212ENST00000573332 DDTP30046 118 aa10.45□□□□□ -0.74
LITAF-212ENST00000573332 SPRR1AP35321 89 aa10.45□□□□□ -0.74
LITAF-212ENST00000573332 PYY3Q5JQD4 70 aa10.45□□□□□ -0.74
LITAF-212ENST00000573332 VAMP8Q9BV40 100 aa10.45□□□□□ -0.74
LITAF-212ENST00000573332 LINC00518Q8N0U6 118 aa10.44□□□□□ -0.74
LITAF-212ENST00000573332 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
LITAF-212ENST00000573332 FAT3Q8TDW7 4589 aa10.43□□□□□ -0.74
LITAF-212ENST00000573332 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
LITAF-212ENST00000573332 UBE2AP49459 152 aa10.43□□□□□ -0.74
LITAF-212ENST00000573332 S100A12P80511 92 aa10.43□□□□□ -0.74
LITAF-212ENST00000573332 SPATA45Q537H7 98 aa10.43□□□□□ -0.74
LITAF-212ENST00000573332 LINC00337Q8N6G1 96 aa10.43□□□□□ -0.74
LITAF-212ENST00000573332 PAM16Q9Y3D7 125 aa10.43□□□□□ -0.74
LITAF-212ENST00000573332 KRTAP4-16G5E9R7 235 aaPredicted RBP10.42□□□□□ -0.74
LITAF-212ENST00000573332 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
LITAF-212ENST00000573332 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
LITAF-212ENST00000573332 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
LITAF-212ENST00000573332 J3QL48 77 aa10.41□□□□□ -0.74
LITAF-212ENST00000573332 CBY1Q9Y3M2 126 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms