RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 TNXBP22105 4242 aa9.24□□□□□ -0.93
NPLOC4-207ENST00000572346 HERV-K104P63124 156 aa9.24□□□□□ -0.93
NPLOC4-207ENST00000572346 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
NPLOC4-207ENST00000572346 LINC01600Q96MT4 127 aa9.24□□□□□ -0.93
NPLOC4-207ENST00000572346 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
NPLOC4-207ENST00000572346 HSBP1L1C9JCN9 74 aa9.23□□□□□ -0.93
NPLOC4-207ENST00000572346 NMUP48645 174 aa9.23□□□□□ -0.93
NPLOC4-207ENST00000572346 TSPEAR-AS2P59090 65 aa9.23□□□□□ -0.93
NPLOC4-207ENST00000572346 LRP2P98164 4655 aa9.23□□□□□ -0.93
NPLOC4-207ENST00000572346 LINC00587B1AMM8 73 aa9.22□□□□□ -0.93
NPLOC4-207ENST00000572346 LINC00158P58513 81 aa9.22□□□□□ -0.93
NPLOC4-207ENST00000572346 COX17Q14061 63 aa9.22□□□□□ -0.93
NPLOC4-207ENST00000572346 A0A0U1RRA0 63 aa9.21□□□□□ -0.94
NPLOC4-207ENST00000572346 XAGE1AQ9HD64 81 aa9.21□□□□□ -0.94
NPLOC4-207ENST00000572346 ANKRD39Q53RE8 183 aa9.2□□□□□ -0.94
NPLOC4-207ENST00000572346 RNF213Q63HN8 5207 aa9.19□□□□□ -0.94
NPLOC4-207ENST00000572346 IGKV2D-26A0A0A0MRZ7 120 aa9.19□□□□□ -0.94
NPLOC4-207ENST00000572346 SMIM13P0DJ93 91 aa9.19□□□□□ -0.94
NPLOC4-207ENST00000572346 ZNF815PA8K554 130 aa9.18□□□□□ -0.94
NPLOC4-207ENST00000572346 C9orf129Q5T035 196 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-207ENST00000572346 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
NPLOC4-207ENST00000572346 SPINK6Q6UWN8 80 aa9.17□□□□□ -0.94
NPLOC4-207ENST00000572346 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
NPLOC4-207ENST00000572346 FAM168BA1KXE4 195 aa9.16□□□□□ -0.94
NPLOC4-207ENST00000572346 KRTAP10-8P60410 259 aa9.16□□□□□ -0.94
NPLOC4-207ENST00000572346 JOSD1Q15040 202 aaPredicted RBP9.16□□□□□ -0.94
NPLOC4-207ENST00000572346 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
NPLOC4-207ENST00000572346 A0A0J9YXY3 114 aa9.15□□□□□ -0.94
NPLOC4-207ENST00000572346 REG3GQ6UW15 175 aa9.15□□□□□ -0.94
NPLOC4-207ENST00000572346 MIR7-3HGQ8N6C7 128 aa9.15□□□□□ -0.94
NPLOC4-207ENST00000572346 TTTY13Q9BZ97 58 aa9.15□□□□□ -0.94
NPLOC4-207ENST00000572346 SRSF9Q13242 221 aaKnown RBP eCLIP9.14□□□□□ -0.95
NPLOC4-207ENST00000572346 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
NPLOC4-207ENST00000572346 M0QXV9 152 aa9.12□□□□□ -0.95
NPLOC4-207ENST00000572346 RPL24P83731 157 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-207ENST00000572346 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-207ENST00000572346 PCP2Q8IVA1 136 aa9.12□□□□□ -0.95
NPLOC4-207ENST00000572346 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
NPLOC4-207ENST00000572346 MIEN1Q9BRT3 115 aa9.12□□□□□ -0.95
NPLOC4-207ENST00000572346 DAND5Q8N907 189 aa9.11□□□□□ -0.95
NPLOC4-207ENST00000572346 VAMP8Q9BV40 100 aa9.11□□□□□ -0.95
NPLOC4-207ENST00000572346 UBE2BP63146 152 aa9.1□□□□□ -0.95
NPLOC4-207ENST00000572346 LBHQ53QV2 105 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-207ENST00000572346 PAM16Q9Y3D7 125 aa9.1□□□□□ -0.95
NPLOC4-207ENST00000572346 C22orf24Q9Y442 160 aa9.1□□□□□ -0.95
NPLOC4-207ENST00000572346 TIMM17BO60830 172 aa9.09□□□□□ -0.95
NPLOC4-207ENST00000572346 PYY3Q5JQD4 70 aa9.09□□□□□ -0.95
NPLOC4-207ENST00000572346 BOD1L2Q8IYS8 172 aa9.09□□□□□ -0.95
NPLOC4-207ENST00000572346 TMEM238C9JI98 176 aa9.08□□□□□ -0.96
NPLOC4-207ENST00000572346 NPC2P61916 151 aa9.08□□□□□ -0.96
NPLOC4-207ENST00000572346 SPATA45Q537H7 98 aa9.08□□□□□ -0.96
NPLOC4-207ENST00000572346 KRTAP7-1Q8IUC3 87 aa9.08□□□□□ -0.96
NPLOC4-207ENST00000572346 ADAMTSL4-AS1Q5T5F5 129 aa9.07□□□□□ -0.96
NPLOC4-207ENST00000572346 MRPL55Q7Z7F7 128 aaKnown RBP9.07□□□□□ -0.96
NPLOC4-207ENST00000572346 TP73-AS1Q9UF72 201 aa9.07□□□□□ -0.96
NPLOC4-207ENST00000572346 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
NPLOC4-207ENST00000572346 VPREB1P12018 145 aa9.06□□□□□ -0.96
NPLOC4-207ENST00000572346 GAGE10A6NGK3 116 aa9.05□□□□□ -0.96
NPLOC4-207ENST00000572346 COX8AP10176 69 aa9.05□□□□□ -0.96
NPLOC4-207ENST00000572346 COPS9Q8WXC6 57 aa9.04□□□□□ -0.96
NPLOC4-207ENST00000572346 LINC00167Q96N53 147 aa9.04□□□□□ -0.96
NPLOC4-207ENST00000572346 LITAFQ99732 161 aa9.04□□□□□ -0.96
NPLOC4-207ENST00000572346 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
NPLOC4-207ENST00000572346 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
NPLOC4-207ENST00000572346 S100A12P80511 92 aa9.03□□□□□ -0.96
NPLOC4-207ENST00000572346 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
NPLOC4-207ENST00000572346 LINC00308Q8TCZ7 52 aa9.03□□□□□ -0.96
NPLOC4-207ENST00000572346 C14orf144Q96I85 54 aa9.03□□□□□ -0.96
NPLOC4-207ENST00000572346 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
NPLOC4-207ENST00000572346 M0R378 163 aa9.02□□□□□ -0.97
NPLOC4-207ENST00000572346 NCR3O14931 201 aa9.02□□□□□ -0.97
NPLOC4-207ENST00000572346 Q6ZVH6 145 aa9.02□□□□□ -0.97
NPLOC4-207ENST00000572346 SPANXDQ9BXN6 97 aa9.02□□□□□ -0.97
NPLOC4-207ENST00000572346 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
NPLOC4-207ENST00000572346 DLEU1O43261 78 aa9.01□□□□□ -0.97
NPLOC4-207ENST00000572346 C1orf137Q5JT78 98 aa9.01□□□□□ -0.97
NPLOC4-207ENST00000572346 SLC25A34Q6PIV7 304 aa9.01□□□□□ -0.97
NPLOC4-207ENST00000572346 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
NPLOC4-207ENST00000572346 Q8NDZ9 215 aa9.01□□□□□ -0.97
NPLOC4-207ENST00000572346 NDUFC2O95298 119 aa9□□□□□ -0.97
NPLOC4-207ENST00000572346 IFITM1P13164 125 aa9□□□□□ -0.97
NPLOC4-207ENST00000572346 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
NPLOC4-207ENST00000572346 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
NPLOC4-207ENST00000572346 KRTAP11-1Q8IUC1 163 aa8.99□□□□□ -0.97
NPLOC4-207ENST00000572346 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-207ENST00000572346 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-207ENST00000572346 MUSTN1Q8IVN3 82 aa8.98□□□□□ -0.97
NPLOC4-207ENST00000572346 TRBV10-2A0A0K0K1G8 114 aa8.97□□□□□ -0.97
NPLOC4-207ENST00000572346 S100A7L2Q5SY68 101 aa8.97□□□□□ -0.97
NPLOC4-207ENST00000572346 IGLV1-50A0A075B6I6 118 aa8.96□□□□□ -0.98
NPLOC4-207ENST00000572346 HIST1H4GQ99525 98 aa8.96□□□□□ -0.98
NPLOC4-207ENST00000572346 LPAP08519 4548 aa8.95□□□□□ -0.98
NPLOC4-207ENST00000572346 LOC105371267A0A1B0GV96 52 aa8.95□□□□□ -0.98
NPLOC4-207ENST00000572346 IGLV7-43P04211 117 aa8.95□□□□□ -0.98
NPLOC4-207ENST00000572346 LINC00518Q8N0U6 118 aa8.95□□□□□ -0.98
NPLOC4-207ENST00000572346 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
NPLOC4-207ENST00000572346 TRBV10-3A0A0K0K1G6 114 aa8.94□□□□□ -0.98
NPLOC4-207ENST00000572346 SMIM6P0DI80 62 aa8.94□□□□□ -0.98
NPLOC4-207ENST00000572346 DDTP30046 118 aa8.94□□□□□ -0.98
NPLOC4-207ENST00000572346 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms