RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KIAA1644Q3SXP7 199 aa5.68□□□□□ -1.5
CTDNEP1-202ENST00000570380 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
CTDNEP1-202ENST00000570380 FAM19A2Q8N3H0 131 aa5.68□□□□□ -1.5
CTDNEP1-202ENST00000570380 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
CTDNEP1-202ENST00000570380 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
CTDNEP1-202ENST00000570380 TRAV9-1A0A075B6T8 112 aa5.67□□□□□ -1.5
CTDNEP1-202ENST00000570380 LOC389332A0A1B0GUA5 103 aa5.67□□□□□ -1.5
CTDNEP1-202ENST00000570380 RAB5AP20339 215 aa5.67□□□□□ -1.5
CTDNEP1-202ENST00000570380 C2orf66Q6UXQ4 117 aa5.67□□□□□ -1.5
CTDNEP1-202ENST00000570380 VCX2Q9H322 139 aa5.67□□□□□ -1.5
CTDNEP1-202ENST00000570380 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-202ENST00000570380 MACF1Q9UPN3 7388 aaKnown RBP5.66□□□□□ -1.5
CTDNEP1-202ENST00000570380 SLC25A20O43772 301 aa5.65□□□□□ -1.5
CTDNEP1-202ENST00000570380 S100A6P06703 90 aa5.65□□□□□ -1.5
CTDNEP1-202ENST00000570380 VPREB1P12018 145 aa5.65□□□□□ -1.5
CTDNEP1-202ENST00000570380 MAP1LC3AQ9H492 121 aa5.65□□□□□ -1.5
CTDNEP1-202ENST00000570380 LAMTOR2Q9Y2Q5 125 aa5.65□□□□□ -1.5
CTDNEP1-202ENST00000570380 KRTAP4-16G5E9R7 235 aaPredicted RBP5.64□□□□□ -1.51
CTDNEP1-202ENST00000570380 HERVK_113P63121 156 aa5.64□□□□□ -1.51
CTDNEP1-202ENST00000570380 Q8N8P6 123 aa5.64□□□□□ -1.51
CTDNEP1-202ENST00000570380 COX7B2Q8TF08 81 aa5.64□□□□□ -1.51
CTDNEP1-202ENST00000570380 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
CTDNEP1-202ENST00000570380 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
CTDNEP1-202ENST00000570380 COX19Q49B96 90 aa5.63□□□□□ -1.51
CTDNEP1-202ENST00000570380 YPEL4Q96NS1 127 aa5.63□□□□□ -1.51
CTDNEP1-202ENST00000570380 MRPL18Q9H0U6 180 aaKnown RBP5.63□□□□□ -1.51
CTDNEP1-202ENST00000570380 GEMIN7Q9H840 131 aaKnown RBP5.63□□□□□ -1.51
CTDNEP1-202ENST00000570380 IGIPA6NJ69 53 aa5.62□□□□□ -1.51
CTDNEP1-202ENST00000570380 SEC11AP67812 179 aa5.62□□□□□ -1.51
CTDNEP1-202ENST00000570380 FABP9Q0Z7S8 132 aa5.62□□□□□ -1.51
CTDNEP1-202ENST00000570380 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
CTDNEP1-202ENST00000570380 Q8NDZ9 215 aa5.62□□□□□ -1.51
CTDNEP1-202ENST00000570380 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
CTDNEP1-202ENST00000570380 NPSP0C0P6 89 aa5.61□□□□□ -1.51
CTDNEP1-202ENST00000570380 PDZD11Q5EBL8 140 aa5.61□□□□□ -1.51
CTDNEP1-202ENST00000570380 NXT2Q9NPJ8 142 aaKnown RBP5.61□□□□□ -1.51
CTDNEP1-202ENST00000570380 MOBPQ13875 183 aa5.6□□□□□ -1.51
CTDNEP1-202ENST00000570380 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
CTDNEP1-202ENST00000570380 SND1-IT1Q9HBX3 110 aa5.6□□□□□ -1.51
CTDNEP1-202ENST00000570380 TRAPPC1Q9Y5R8 145 aa5.6□□□□□ -1.51
CTDNEP1-202ENST00000570380 PFN2P35080 140 aa5.59□□□□□ -1.51
CTDNEP1-202ENST00000570380 RPL24P83731 157 aaKnown RBP5.59□□□□□ -1.51
CTDNEP1-202ENST00000570380 ORMDL2Q53FV1 153 aa5.59□□□□□ -1.51
CTDNEP1-202ENST00000570380 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
CTDNEP1-202ENST00000570380 SMCR5Q8TEV8 140 aa5.59□□□□□ -1.51
CTDNEP1-202ENST00000570380 IGLV9-49A0A0B4J1Y8 123 aa5.58□□□□□ -1.52
CTDNEP1-202ENST00000570380 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
CTDNEP1-202ENST00000570380 LINC01546A6NGU7 62 aa5.58□□□□□ -1.52
CTDNEP1-202ENST00000570380 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
CTDNEP1-202ENST00000570380 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
CTDNEP1-202ENST00000570380 COLCA2A8K830 154 aa5.57□□□□□ -1.52
CTDNEP1-202ENST00000570380 K7EMI3 77 aa5.57□□□□□ -1.52
CTDNEP1-202ENST00000570380 C18orf32Q8TCD1 76 aa5.57□□□□□ -1.52
CTDNEP1-202ENST00000570380 TOMM6Q96B49 74 aa5.57□□□□□ -1.52
CTDNEP1-202ENST00000570380 IGLV5-45A0A087WSX0 123 aa5.56□□□□□ -1.52
CTDNEP1-202ENST00000570380 ATP5LO75964 103 aa5.56□□□□□ -1.52
CTDNEP1-202ENST00000570380 SPINK8P0C7L1 97 aa5.56□□□□□ -1.52
CTDNEP1-202ENST00000570380 S100A2P29034 98 aa5.56□□□□□ -1.52
CTDNEP1-202ENST00000570380 GAGE2AQ6NT46 116 aa5.56□□□□□ -1.52
CTDNEP1-202ENST00000570380 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
CTDNEP1-202ENST00000570380 A0A096LNJ9 63 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 TINCRA0A1B0GVN0 87 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 CFC1P0CG37 223 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 PMCHL1Q16048 86 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 PAPPA-AS1Q5QFB9 102 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 TIMM17AQ99595 171 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
CTDNEP1-202ENST00000570380 LCE2BO14633 110 aa5.54□□□□□ -1.52
CTDNEP1-202ENST00000570380 SCGB3A1Q96QR1 104 aa5.54□□□□□ -1.52
CTDNEP1-202ENST00000570380 ERG28Q9UKR5 140 aa5.54□□□□□ -1.52
CTDNEP1-202ENST00000570380 TRGC2P03986 189 aa5.53□□□□□ -1.52
CTDNEP1-202ENST00000570380 LINC00614P0C842 121 aa5.53□□□□□ -1.52
CTDNEP1-202ENST00000570380 SPRR1AP35321 89 aa5.53□□□□□ -1.52
CTDNEP1-202ENST00000570380 AKR1D1P51857 326 aa5.53□□□□□ -1.52
CTDNEP1-202ENST00000570380 ERASQ7Z444 233 aa5.53□□□□□ -1.52
CTDNEP1-202ENST00000570380 PRYO14603 147 aa5.52□□□□□ -1.53
CTDNEP1-202ENST00000570380 ERC2-IT1O76042 136 aa5.52□□□□□ -1.53
CTDNEP1-202ENST00000570380 G0S2P27469 103 aa5.52□□□□□ -1.53
CTDNEP1-202ENST00000570380 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
CTDNEP1-202ENST00000570380 NDUFA6P56556 154 aa5.51□□□□□ -1.53
CTDNEP1-202ENST00000570380 COX17Q14061 63 aa5.51□□□□□ -1.53
CTDNEP1-202ENST00000570380 ZNF625Q96I27 306 aaPredicted RBP5.51□□□□□ -1.53
CTDNEP1-202ENST00000570380 HBDP02042 147 aa5.5□□□□□ -1.53
CTDNEP1-202ENST00000570380 LINC00310P59036 64 aa5.5□□□□□ -1.53
CTDNEP1-202ENST00000570380 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
CTDNEP1-202ENST00000570380 CST9LQ9H4G1 147 aa5.5□□□□□ -1.53
CTDNEP1-202ENST00000570380 ETDCA0A1B0GVM5 59 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 SMIM6P0DI80 62 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 SNRPEP62304 92 aaKnown RBP5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 PMVKQ15126 192 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
CTDNEP1-202ENST00000570380 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms