RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 SMIM13P0DJ93 91 aa5.97□□□□□ -1.45
GTF3C1-212ENST00000570129 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
GTF3C1-212ENST00000570129 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
GTF3C1-212ENST00000570129 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
GTF3C1-212ENST00000570129 CXCL5P42830 114 aa5.96□□□□□ -1.46
GTF3C1-212ENST00000570129 HSPB8Q9UJY1 196 aa5.96□□□□□ -1.46
GTF3C1-212ENST00000570129 SYS1-DBNDD2H3BUS1 97 aa5.95□□□□□ -1.46
GTF3C1-212ENST00000570129 DPM2O94777 84 aa5.95□□□□□ -1.46
GTF3C1-212ENST00000570129 OXTP01178 125 aa5.95□□□□□ -1.46
GTF3C1-212ENST00000570129 UBE2BP63146 152 aa5.95□□□□□ -1.46
GTF3C1-212ENST00000570129 DAND5Q8N907 189 aa5.95□□□□□ -1.46
GTF3C1-212ENST00000570129 C3orf79P0CE67 100 aa5.94□□□□□ -1.46
GTF3C1-212ENST00000570129 VPREB1P12018 145 aa5.94□□□□□ -1.46
GTF3C1-212ENST00000570129 LINC00158P58513 81 aa5.94□□□□□ -1.46
GTF3C1-212ENST00000570129 COA6Q5JTJ3 125 aaKnown RBP5.94□□□□□ -1.46
GTF3C1-212ENST00000570129 TTTY13Q9BZ97 58 aa5.94□□□□□ -1.46
GTF3C1-212ENST00000570129 NDUFA12Q9UI09 145 aa5.94□□□□□ -1.46
GTF3C1-212ENST00000570129 TMEM238C9JI98 176 aa5.93□□□□□ -1.46
GTF3C1-212ENST00000570129 LEPROTO15243 131 aa5.93□□□□□ -1.46
GTF3C1-212ENST00000570129 IGKCP01834 107 aa5.93□□□□□ -1.46
GTF3C1-212ENST00000570129 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
GTF3C1-212ENST00000570129 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
GTF3C1-212ENST00000570129 MRPL55Q7Z7F7 128 aaKnown RBP5.93□□□□□ -1.46
GTF3C1-212ENST00000570129 MAP1LC3CQ9BXW4 147 aa5.93□□□□□ -1.46
GTF3C1-212ENST00000570129 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 IGKV2-28A0A075B6P5 120 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 IGKV2D-26A0A0A0MRZ7 120 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 IGKV2D-28P01615 120 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 KRTDAPP60985 99 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 ADAMTSL4-AS1Q5T5F5 129 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 LINC01600Q96MT4 127 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
GTF3C1-212ENST00000570129 J3QQQ9 107 aa5.91□□□□□ -1.46
GTF3C1-212ENST00000570129 S100A1P23297 94 aa5.91□□□□□ -1.46
GTF3C1-212ENST00000570129 LINC01545Q5VT33 79 aa5.91□□□□□ -1.46
GTF3C1-212ENST00000570129 ATOH7Q8N100 152 aa5.91□□□□□ -1.46
GTF3C1-212ENST00000570129 MIR7-3HGQ8N6C7 128 aa5.91□□□□□ -1.46
GTF3C1-212ENST00000570129 PRR26Q8N8Z3 221 aa5.91□□□□□ -1.46
GTF3C1-212ENST00000570129 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
GTF3C1-212ENST00000570129 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
GTF3C1-212ENST00000570129 PLNP26678 52 aa5.9□□□□□ -1.46
GTF3C1-212ENST00000570129 NCR3O14931 201 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 NPC2P61916 151 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 LBHQ53QV2 105 aaPredicted RBP5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 MEIG1Q5JSS6 88 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 SOSTDC1Q6X4U4 206 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 NKAPP1Q8N9T2 125 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 PLEKHB2Q96CS7 222 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 CDIP1Q9H305 208 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 TP73-AS1Q9UF72 201 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
GTF3C1-212ENST00000570129 IGLV1-50A0A075B6I6 118 aa5.88□□□□□ -1.47
GTF3C1-212ENST00000570129 MYMXA0A1B0GTQ4 84 aa5.88□□□□□ -1.47
GTF3C1-212ENST00000570129 H0Y9J4 135 aa5.88□□□□□ -1.47
GTF3C1-212ENST00000570129 COX17Q14061 63 aa5.88□□□□□ -1.47
GTF3C1-212ENST00000570129 PET117Q6UWS5 81 aa5.88□□□□□ -1.47
GTF3C1-212ENST00000570129 BOD1L2Q8IYS8 172 aa5.88□□□□□ -1.47
GTF3C1-212ENST00000570129 HIST3H2BBQ8N257 126 aa5.88□□□□□ -1.47
GTF3C1-212ENST00000570129 A0A0J9YXY3 114 aa5.87□□□□□ -1.47
GTF3C1-212ENST00000570129 E9PLD3 99 aa5.87□□□□□ -1.47
GTF3C1-212ENST00000570129 M0R378 163 aa5.87□□□□□ -1.47
GTF3C1-212ENST00000570129 ZNF861PO60384 105 aa5.87□□□□□ -1.47
GTF3C1-212ENST00000570129 BCE1O60756 84 aa5.87□□□□□ -1.47
GTF3C1-212ENST00000570129 KRTAP13-1Q8IUC0 172 aa5.87□□□□□ -1.47
GTF3C1-212ENST00000570129 LGALS3P17931 250 aaKnown RBP5.86□□□□□ -1.47
GTF3C1-212ENST00000570129 PRLHP81277 87 aa5.86□□□□□ -1.47
GTF3C1-212ENST00000570129 REG3GQ6UW15 175 aa5.86□□□□□ -1.47
GTF3C1-212ENST00000570129 DIRC1Q969H9 104 aa5.86□□□□□ -1.47
GTF3C1-212ENST00000570129 LITAFQ99732 161 aa5.86□□□□□ -1.47
GTF3C1-212ENST00000570129 HIST1H2BLQ99880 126 aa5.86□□□□□ -1.47
GTF3C1-212ENST00000570129 H3BS24 57 aa5.85□□□□□ -1.47
GTF3C1-212ENST00000570129 SNRPEP62304 92 aaKnown RBP5.85□□□□□ -1.47
GTF3C1-212ENST00000570129 HERV-K104P63124 156 aa5.85□□□□□ -1.47
GTF3C1-212ENST00000570129 TMEM126AQ9H061 195 aa5.85□□□□□ -1.47
GTF3C1-212ENST00000570129 HERVK_113P61574 105 aa5.84□□□□□ -1.47
GTF3C1-212ENST00000570129 A0A087X002 238 aa5.83□□□□□ -1.48
GTF3C1-212ENST00000570129 TRBV10-3A0A0K0K1G6 114 aa5.83□□□□□ -1.48
GTF3C1-212ENST00000570129 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
GTF3C1-212ENST00000570129 PCP2Q8IVA1 136 aa5.83□□□□□ -1.48
GTF3C1-212ENST00000570129 SFTA2Q6UW10 78 aa5.82□□□□□ -1.48
GTF3C1-212ENST00000570129 FAM19A1Q7Z5A9 133 aa5.82□□□□□ -1.48
GTF3C1-212ENST00000570129 LOC107984156A0A0G2JMH3 177 aa5.81□□□□□ -1.48
GTF3C1-212ENST00000570129 ZNF815PA8K554 130 aa5.81□□□□□ -1.48
GTF3C1-212ENST00000570129 UBE2AP49459 152 aa5.81□□□□□ -1.48
GTF3C1-212ENST00000570129 KRTAP13-2Q52LG2 175 aa5.81□□□□□ -1.48
GTF3C1-212ENST00000570129 ARL17AQ8IVW1 177 aa5.81□□□□□ -1.48
GTF3C1-212ENST00000570129 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
GTF3C1-212ENST00000570129 ERC2-IT1O76042 136 aa5.8□□□□□ -1.48
GTF3C1-212ENST00000570129 RPL28P46779 137 aaKnown RBP5.8□□□□□ -1.48
GTF3C1-212ENST00000570129 NMUP48645 174 aa5.8□□□□□ -1.48
GTF3C1-212ENST00000570129 C5orf52A6NGY3 159 aa5.79□□□□□ -1.48
GTF3C1-212ENST00000570129 LINC00308Q8TCZ7 52 aa5.79□□□□□ -1.48
GTF3C1-212ENST00000570129 S100A2P29034 98 aa5.78□□□□□ -1.48
GTF3C1-212ENST00000570129 HIGD2AQ9BW72 106 aa5.78□□□□□ -1.48
GTF3C1-212ENST00000570129 KCNQ1DNQ9H478 68 aa5.78□□□□□ -1.48
GTF3C1-212ENST00000570129 LINC00587B1AMM8 73 aa5.77□□□□□ -1.49
GTF3C1-212ENST00000570129 DDTP30046 118 aa5.77□□□□□ -1.49
GTF3C1-212ENST00000570129 SPRR1AP35321 89 aa5.77□□□□□ -1.49
GTF3C1-212ENST00000570129 C3orf22Q8N5N4 141 aa5.77□□□□□ -1.49
GTF3C1-212ENST00000570129 SMCR5Q8TEV8 140 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms