RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 TIMM17BO60830 172 aa9.19□□□□□ -0.94
COMMD4-225ENST00000569245 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
COMMD4-225ENST00000569245 Q6ZRU5 148 aa9.19□□□□□ -0.94
COMMD4-225ENST00000569245 C2orf91Q6ZV80 131 aa9.19□□□□□ -0.94
COMMD4-225ENST00000569245 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
COMMD4-225ENST00000569245 PKIGQ9Y2B9 76 aa9.19□□□□□ -0.94
COMMD4-225ENST00000569245 J3QL48 77 aa9.18□□□□□ -0.94
COMMD4-225ENST00000569245 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
COMMD4-225ENST00000569245 ERG28Q9UKR5 140 aa9.18□□□□□ -0.94
COMMD4-225ENST00000569245 KRTAP10-4P60372 401 aaPredicted RBP9.17□□□□□ -0.94
COMMD4-225ENST00000569245 COX17Q14061 63 aa9.17□□□□□ -0.94
COMMD4-225ENST00000569245 LITAFQ99732 161 aa9.17□□□□□ -0.94
COMMD4-225ENST00000569245 LINC00474Q9P2X8 69 aa9.17□□□□□ -0.94
COMMD4-225ENST00000569245 A0A096LNI7 61 aa9.16□□□□□ -0.94
COMMD4-225ENST00000569245 TMEM238C9JI98 176 aa9.16□□□□□ -0.94
COMMD4-225ENST00000569245 HNRNPA3P51991 378 aaKnown RBP9.16□□□□□ -0.94
COMMD4-225ENST00000569245 SPANXB1Q9NS25 103 aaPredicted RBP9.16□□□□□ -0.94
COMMD4-225ENST00000569245 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
COMMD4-225ENST00000569245 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
COMMD4-225ENST00000569245 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
COMMD4-225ENST00000569245 C7orf33Q8WU49 177 aa9.15□□□□□ -0.94
COMMD4-225ENST00000569245 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 DDTP30046 118 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 PFN2P35080 140 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 GAGE2BQ13066 116 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 Q6ZVH6 145 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
COMMD4-225ENST00000569245 LOC107984640A0A0U1RRK4 108 aa9.13□□□□□ -0.95
COMMD4-225ENST00000569245 LINC00158P58513 81 aa9.13□□□□□ -0.95
COMMD4-225ENST00000569245 TAL2Q16559 108 aa9.13□□□□□ -0.95
COMMD4-225ENST00000569245 A0A0U1RRA0 63 aa9.11□□□□□ -0.95
COMMD4-225ENST00000569245 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
COMMD4-225ENST00000569245 NDUFC2-KCTD14E9PQ53 114 aa9.11□□□□□ -0.95
COMMD4-225ENST00000569245 PTTG1IPP53801 180 aa9.11□□□□□ -0.95
COMMD4-225ENST00000569245 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
COMMD4-225ENST00000569245 MIR7-3HGQ8N6C7 128 aa9.11□□□□□ -0.95
COMMD4-225ENST00000569245 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
COMMD4-225ENST00000569245 IFITM1P13164 125 aa9.1□□□□□ -0.95
COMMD4-225ENST00000569245 RPL18AQ02543 176 aaKnown RBP9.1□□□□□ -0.95
COMMD4-225ENST00000569245 HSD52Q0P140 79 aa9.1□□□□□ -0.95
COMMD4-225ENST00000569245 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
COMMD4-225ENST00000569245 LOC107984156A0A0G2JMH3 177 aa9.09□□□□□ -0.95
COMMD4-225ENST00000569245 CTAG1AP78358 180 aa9.09□□□□□ -0.95
COMMD4-225ENST00000569245 ARL17AQ8IVW1 177 aa9.09□□□□□ -0.95
COMMD4-225ENST00000569245 DAND5Q8N907 189 aa9.09□□□□□ -0.95
COMMD4-225ENST00000569245 Q6ZRP5 223 aa9.08□□□□□ -0.96
COMMD4-225ENST00000569245 LINC00308Q8TCZ7 52 aa9.08□□□□□ -0.96
COMMD4-225ENST00000569245 COPS9Q8WXC6 57 aa9.08□□□□□ -0.96
COMMD4-225ENST00000569245 SND1-IT1Q9HBX3 110 aa9.08□□□□□ -0.96
COMMD4-225ENST00000569245 OXTP01178 125 aa9.07□□□□□ -0.96
COMMD4-225ENST00000569245 MUSTN1Q8IVN3 82 aa9.07□□□□□ -0.96
COMMD4-225ENST00000569245 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
COMMD4-225ENST00000569245 PCP4L1A6NKN8 68 aa9.06□□□□□ -0.96
COMMD4-225ENST00000569245 SOSTDC1Q6X4U4 206 aa9.06□□□□□ -0.96
COMMD4-225ENST00000569245 CEND1Q8N111 149 aa9.06□□□□□ -0.96
COMMD4-225ENST00000569245 LRP1Q07954 4544 aaKnown RBP9.05□□□□□ -0.96
COMMD4-225ENST00000569245 EIF4EBP3O60516 100 aaPredicted RBP9.05□□□□□ -0.96
COMMD4-225ENST00000569245 GAGE2EQ4V326 116 aa9.05□□□□□ -0.96
COMMD4-225ENST00000569245 GAGE2DQ9UEU5 116 aa9.05□□□□□ -0.96
COMMD4-225ENST00000569245 NPC2P61916 151 aa9.04□□□□□ -0.96
COMMD4-225ENST00000569245 RPL24P83731 157 aaKnown RBP9.04□□□□□ -0.96
COMMD4-225ENST00000569245 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
COMMD4-225ENST00000569245 M0R143 59 aa9.03□□□□□ -0.96
COMMD4-225ENST00000569245 PRR3P79522 188 aaKnown RBP9.03□□□□□ -0.96
COMMD4-225ENST00000569245 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
COMMD4-225ENST00000569245 BVES-AS1Q5T3Y7 98 aa9.03□□□□□ -0.96
COMMD4-225ENST00000569245 XAGE1AQ9HD64 81 aa9.03□□□□□ -0.96
COMMD4-225ENST00000569245 FAT3Q8TDW7 4589 aa9.03□□□□□ -0.96
COMMD4-225ENST00000569245 A4D1N5 150 aa9.01□□□□□ -0.97
COMMD4-225ENST00000569245 NDUFC2O95298 119 aa9.01□□□□□ -0.97
COMMD4-225ENST00000569245 HINT1P49773 126 aaPredicted RBP9.01□□□□□ -0.97
COMMD4-225ENST00000569245 FXYD2P54710 66 aa9.01□□□□□ -0.97
COMMD4-225ENST00000569245 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
COMMD4-225ENST00000569245 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
COMMD4-225ENST00000569245 A6NJY4 79 aa9□□□□□ -0.97
COMMD4-225ENST00000569245 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
COMMD4-225ENST00000569245 Q8NDZ9 215 aa8.98□□□□□ -0.97
COMMD4-225ENST00000569245 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
COMMD4-225ENST00000569245 VPREB1P12018 145 aa8.97□□□□□ -0.97
COMMD4-225ENST00000569245 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
COMMD4-225ENST00000569245 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
COMMD4-225ENST00000569245 A0A1B0GWB2 263 aa8.96□□□□□ -0.98
COMMD4-225ENST00000569245 SNHG12Q9BXW3 62 aa8.96□□□□□ -0.98
COMMD4-225ENST00000569245 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 A0A0B4J2C4 111 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 TRBV10-2A0A0K0K1G8 114 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 A6NDN8 102 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 CFC1P0CG37 223 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
COMMD4-225ENST00000569245 NHP2Q9NX24 153 aaKnown RBP8.95□□□□□ -0.98
COMMD4-225ENST00000569245 BATFQ16520 125 aa8.94□□□□□ -0.98
COMMD4-225ENST00000569245 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
COMMD4-225ENST00000569245 PSORS1C2Q9UIG4 136 aa8.94□□□□□ -0.98
COMMD4-225ENST00000569245 C1orf137Q5JT78 98 aa8.93□□□□□ -0.98
COMMD4-225ENST00000569245 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms