RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 PRSS2P07478 247 aa6.13□□□□□ -1.43
CLK3-220ENST00000567992 COX7B2Q8TF08 81 aa6.13□□□□□ -1.43
CLK3-220ENST00000567992 FAM168BA1KXE4 195 aa6.12□□□□□ -1.43
CLK3-220ENST00000567992 NDUFC2-KCTD14E9PQ53 114 aa6.12□□□□□ -1.43
CLK3-220ENST00000567992 F8VRH5 84 aa6.12□□□□□ -1.43
CLK3-220ENST00000567992 H0Y8G0 127 aa6.12□□□□□ -1.43
CLK3-220ENST00000567992 HINT1P49773 126 aaPredicted RBP6.12□□□□□ -1.43
CLK3-220ENST00000567992 CKS1BP61024 79 aa6.12□□□□□ -1.43
CLK3-220ENST00000567992 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
CLK3-220ENST00000567992 KRTAP7-1Q8IUC3 87 aa6.12□□□□□ -1.43
CLK3-220ENST00000567992 CHTOPQ9Y3Y2 248 aaKnown RBP6.12□□□□□ -1.43
CLK3-220ENST00000567992 H3BRM9 83 aa6.11□□□□□ -1.43
CLK3-220ENST00000567992 CXCL5P42830 114 aa6.11□□□□□ -1.43
CLK3-220ENST00000567992 ANKRD39Q53RE8 183 aa6.11□□□□□ -1.43
CLK3-220ENST00000567992 C9orf129Q5T035 196 aaKnown RBP6.11□□□□□ -1.43
CLK3-220ENST00000567992 BVES-AS1Q5T3Y7 98 aa6.11□□□□□ -1.43
CLK3-220ENST00000567992 BOD1L2Q8IYS8 172 aa6.11□□□□□ -1.43
CLK3-220ENST00000567992 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
CLK3-220ENST00000567992 PRR3P79522 188 aaKnown RBP6.1□□□□□ -1.43
CLK3-220ENST00000567992 ODF1Q14990 250 aa6.1□□□□□ -1.43
CLK3-220ENST00000567992 GAGE2EQ4V326 116 aa6.1□□□□□ -1.43
CLK3-220ENST00000567992 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
CLK3-220ENST00000567992 C7orf33Q8WU49 177 aa6.1□□□□□ -1.43
CLK3-220ENST00000567992 GAGE2DQ9UEU5 116 aa6.1□□□□□ -1.43
CLK3-220ENST00000567992 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
CLK3-220ENST00000567992 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
CLK3-220ENST00000567992 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
CLK3-220ENST00000567992 TMEM223A0PJW6 202 aa6.08□□□□□ -1.44
CLK3-220ENST00000567992 IGKCP01834 107 aa6.08□□□□□ -1.44
CLK3-220ENST00000567992 TMEM170BQ5T4T1 132 aa6.08□□□□□ -1.44
CLK3-220ENST00000567992 FAM19A5Q7Z5A7 132 aaPredicted RBP6.08□□□□□ -1.44
CLK3-220ENST00000567992 TP73-AS1Q9UF72 201 aa6.08□□□□□ -1.44
CLK3-220ENST00000567992 TNXBP22105 4242 aa6.07□□□□□ -1.44
CLK3-220ENST00000567992 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
CLK3-220ENST00000567992 DPM2O94777 84 aa6.07□□□□□ -1.44
CLK3-220ENST00000567992 HSD52Q0P140 79 aa6.07□□□□□ -1.44
CLK3-220ENST00000567992 KRTAP11-1Q8IUC1 163 aa6.07□□□□□ -1.44
CLK3-220ENST00000567992 HIGD1BQ9P298 99 aa6.07□□□□□ -1.44
CLK3-220ENST00000567992 UBE2V1Q13404 147 aa6.06□□□□□ -1.44
CLK3-220ENST00000567992 SERTAD4-AS1Q5TG53 156 aa6.06□□□□□ -1.44
CLK3-220ENST00000567992 ZNF625Q96I27 306 aaPredicted RBP6.06□□□□□ -1.44
CLK3-220ENST00000567992 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
CLK3-220ENST00000567992 KRTAP29-1A8MX34 341 aaPredicted RBP6.05□□□□□ -1.44
CLK3-220ENST00000567992 PLNP26678 52 aa6.05□□□□□ -1.44
CLK3-220ENST00000567992 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
CLK3-220ENST00000567992 A6NDN8 102 aa6.04□□□□□ -1.44
CLK3-220ENST00000567992 M0QXV9 152 aa6.04□□□□□ -1.44
CLK3-220ENST00000567992 PCP2Q8IVA1 136 aa6.04□□□□□ -1.44
CLK3-220ENST00000567992 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
CLK3-220ENST00000567992 IGKV2D-26A0A0A0MRZ7 120 aa6.03□□□□□ -1.44
CLK3-220ENST00000567992 NMUP48645 174 aa6.03□□□□□ -1.44
CLK3-220ENST00000567992 TSPEAR-AS2P59090 65 aa6.03□□□□□ -1.44
CLK3-220ENST00000567992 PFN2P35080 140 aa6.02□□□□□ -1.45
CLK3-220ENST00000567992 SRSF9Q13242 221 aaKnown RBP eCLIP6.02□□□□□ -1.45
CLK3-220ENST00000567992 TAL2Q16559 108 aa6.02□□□□□ -1.45
CLK3-220ENST00000567992 SFTA2Q6UW10 78 aa6.02□□□□□ -1.45
CLK3-220ENST00000567992 Q6ZVH6 145 aa6.02□□□□□ -1.45
CLK3-220ENST00000567992 PLA2G2DQ9UNK4 145 aa6.02□□□□□ -1.45
CLK3-220ENST00000567992 C22orf24Q9Y442 160 aa6.02□□□□□ -1.45
CLK3-220ENST00000567992 IGLV5-37A0A075B6J1 123 aa6.01□□□□□ -1.45
CLK3-220ENST00000567992 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
CLK3-220ENST00000567992 OXTP01178 125 aa6.01□□□□□ -1.45
CLK3-220ENST00000567992 COX17Q14061 63 aa6.01□□□□□ -1.45
CLK3-220ENST00000567992 VAMP3Q15836 100 aa6.01□□□□□ -1.45
CLK3-220ENST00000567992 C1orf137Q5JT78 98 aa6□□□□□ -1.45
CLK3-220ENST00000567992 SPINK6Q6UWN8 80 aa6□□□□□ -1.45
CLK3-220ENST00000567992 Q8NDZ9 215 aa6□□□□□ -1.45
CLK3-220ENST00000567992 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
CLK3-220ENST00000567992 HMCN2Q8NDA2 5059 aa6□□□□□ -1.45
CLK3-220ENST00000567992 E9PLD3 99 aa5.99□□□□□ -1.45
CLK3-220ENST00000567992 LEPROTO15243 131 aa5.99□□□□□ -1.45
CLK3-220ENST00000567992 MT1HL1P0DM35 61 aa5.99□□□□□ -1.45
CLK3-220ENST00000567992 MRPL55Q7Z7F7 128 aaKnown RBP5.99□□□□□ -1.45
CLK3-220ENST00000567992 NDUFA12Q9UI09 145 aa5.99□□□□□ -1.45
CLK3-220ENST00000567992 IGLV7-43P04211 117 aa5.98□□□□□ -1.45
CLK3-220ENST00000567992 VPREB1P12018 145 aa5.98□□□□□ -1.45
CLK3-220ENST00000567992 UBE2BP63146 152 aa5.98□□□□□ -1.45
CLK3-220ENST00000567992 MYMXA0A1B0GTQ4 84 aa5.97□□□□□ -1.45
CLK3-220ENST00000567992 J3QQQ9 107 aa5.97□□□□□ -1.45
CLK3-220ENST00000567992 SMIM13P0DJ93 91 aa5.97□□□□□ -1.45
CLK3-220ENST00000567992 CEND1Q8N111 149 aa5.97□□□□□ -1.45
CLK3-220ENST00000567992 PLEKHB2Q96CS7 222 aa5.97□□□□□ -1.45
CLK3-220ENST00000567992 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
CLK3-220ENST00000567992 TTTY13Q9BZ97 58 aa5.97□□□□□ -1.45
CLK3-220ENST00000567992 A0A0U1RRA0 63 aa5.96□□□□□ -1.46
CLK3-220ENST00000567992 LINC00158P58513 81 aa5.96□□□□□ -1.46
CLK3-220ENST00000567992 HERVK_113P61574 105 aa5.96□□□□□ -1.46
CLK3-220ENST00000567992 HERV-K104P63124 156 aa5.96□□□□□ -1.46
CLK3-220ENST00000567992 GTF2H5Q6ZYL4 71 aa5.96□□□□□ -1.46
CLK3-220ENST00000567992 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 RPL37AP8A6NKH3 93 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 K7EP34 96 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 FXYD2P54710 66 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 NKAPP1Q8N9T2 125 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 LINC01600Q96MT4 127 aa5.95□□□□□ -1.46
CLK3-220ENST00000567992 A0A1B0GWB2 263 aa5.94□□□□□ -1.46
CLK3-220ENST00000567992 A0A1W2PPM0 123 aa5.94□□□□□ -1.46
CLK3-220ENST00000567992 H3BUT2 72 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms