RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 Q6ZRU5 148 aa4.35□□□□□ -1.71
SF3B3-209ENST00000567635 BOD1L2Q8IYS8 172 aa4.35□□□□□ -1.71
SF3B3-209ENST00000567635 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
SF3B3-209ENST00000567635 PYGO1Q9Y3Y4 419 aa4.35□□□□□ -1.71
SF3B3-209ENST00000567635 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 IGHV3OR16-9A0A0B4J2B5 98 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 F8WDY8 70 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 GAGE2BQ13066 116 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 XP32Q5T750 250 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 SERTAD4-AS1Q5TG53 156 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 RAB37Q96AX2 223 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 HIGD1BQ9P298 99 aa4.34□□□□□ -1.71
SF3B3-209ENST00000567635 LINC01549A6NIU2 74 aa4.33□□□□□ -1.72
SF3B3-209ENST00000567635 ATP5LO75964 103 aa4.33□□□□□ -1.72
SF3B3-209ENST00000567635 SPAG11BQ08648 103 aa4.33□□□□□ -1.72
SF3B3-209ENST00000567635 IFI27L1Q96BM0 104 aa4.33□□□□□ -1.72
SF3B3-209ENST00000567635 TMEM141Q96I45 108 aa4.33□□□□□ -1.72
SF3B3-209ENST00000567635 IGLV4-3A0A075B6K6 122 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 A0A087WZ39 114 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 E9PLD3 99 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 PRR3P79522 188 aaKnown RBP4.32□□□□□ -1.72
SF3B3-209ENST00000567635 TAL2Q16559 108 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 LINC00242Q5T6M2 205 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 LYRM7Q5U5X0 104 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 C2orf66Q6UXQ4 117 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 SMIM20Q8N5G0 67 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 TOMM6Q96B49 74 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 TP73-AS1Q9UF72 201 aa4.32□□□□□ -1.72
SF3B3-209ENST00000567635 A0A0J9YXV3 536 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 A0A1B0GWB2 263 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 A0A1W2PNN7 141 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 B5MCH6 92 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 H3BMG7 143 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 NDUFA1O15239 70 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 RPL18AQ02543 176 aaKnown RBP4.31□□□□□ -1.72
SF3B3-209ENST00000567635 UNQ6190/PRO20217Q6UXQ8 127 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 Q6ZRP5 223 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 SCGB3A1Q96QR1 104 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 NAA38Q9BRA0 125 aaKnown RBP4.31□□□□□ -1.72
SF3B3-209ENST00000567635 TMEM126AQ9H061 195 aa4.31□□□□□ -1.72
SF3B3-209ENST00000567635 MRPL35Q9NZE8 188 aaKnown RBP4.31□□□□□ -1.72
SF3B3-209ENST00000567635 IGIPA6NJ69 53 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 UBE2D1P51668 147 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 ETDBQ3ZM63 59 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-209ENST00000567635 PAPPA-AS1Q5QFB9 102 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 Q6Q795 121 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 LINC01561Q8N1V8 128 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 PPDPFLQ8WWR9 84 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 AMELXQ99217 191 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 CDIP1Q9H305 208 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 SPANXCQ9NY87 97 aa4.3□□□□□ -1.72
SF3B3-209ENST00000567635 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
SF3B3-209ENST00000567635 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
SF3B3-209ENST00000567635 SRSF9Q13242 221 aaKnown RBP eCLIP4.29□□□□□ -1.72
SF3B3-209ENST00000567635 KIAA0087Q14695 138 aa4.29□□□□□ -1.72
SF3B3-209ENST00000567635 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
SF3B3-209ENST00000567635 SPINK6Q6UWN8 80 aa4.29□□□□□ -1.72
SF3B3-209ENST00000567635 TRBV30A0A0K0K1B3 111 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 PRSS2P07478 247 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 NMUP48645 174 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 GAGE2EQ4V326 116 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 C6orf226Q5I0X4 101 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 REG3GQ6UW15 175 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 C2orf82Q6UX34 121 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 FAM19A3Q7Z5A8 133 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 CEND1Q8N111 149 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 LINC01600Q96MT4 127 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 TIMM17AQ99595 171 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 SPANXDQ9BXN6 97 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 NHP2Q9NX24 153 aaKnown RBP4.28□□□□□ -1.72
SF3B3-209ENST00000567635 C6orf48Q9UBA6 75 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 GAGE2DQ9UEU5 116 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
SF3B3-209ENST00000567635 SNCGO76070 127 aa4.27□□□□□ -1.73
SF3B3-209ENST00000567635 IFITM1P13164 125 aa4.27□□□□□ -1.73
SF3B3-209ENST00000567635 FXYD2P54710 66 aa4.27□□□□□ -1.73
SF3B3-209ENST00000567635 HERVK_113P63121 156 aa4.27□□□□□ -1.73
SF3B3-209ENST00000567635 PMVKQ15126 192 aa4.27□□□□□ -1.73
SF3B3-209ENST00000567635 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
SF3B3-209ENST00000567635 PSORS1C2Q9UIG4 136 aa4.27□□□□□ -1.73
SF3B3-209ENST00000567635 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
SF3B3-209ENST00000567635 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 FAM168BA1KXE4 195 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 NDUFC2-KCTD14E9PQ53 114 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 F8VRH5 84 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 DPM2O94777 84 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 IGKCP01834 107 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
SF3B3-209ENST00000567635 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 Q8IZM0 81 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 TOMM7Q9P0U1 55 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 CDKN2A-AS1Q9UH64 79 aa4.26□□□□□ -1.73
SF3B3-209ENST00000567635 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms