RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 TENM3Q9P273 2699 aa11.99□□□□□ -0.49
CMTM3-214ENST00000567572 PRB2P02812 416 aaPredicted RBP11.98□□□□□ -0.49
CMTM3-214ENST00000567572 Q6ZTC4 211 aa11.98□□□□□ -0.49
CMTM3-214ENST00000567572 JMJD7-PLA2G4BH0Y9G9 81 aa11.98□□□□□ -0.49
CMTM3-214ENST00000567572 K7EIL1 84 aa11.98□□□□□ -0.49
CMTM3-214ENST00000567572 KPRPQ5T749 579 aaPredicted RBP11.98□□□□□ -0.49
CMTM3-214ENST00000567572 Q8N814 137 aa11.98□□□□□ -0.49
CMTM3-214ENST00000567572 TMEM256-PLSCR3K7ERE1 68 aa11.96□□□□□ -0.49
CMTM3-214ENST00000567572 MDFIQ99750 246 aa11.96□□□□□ -0.49
CMTM3-214ENST00000567572 C14orf132Q9NPU4 83 aa11.96□□□□□ -0.5
CMTM3-214ENST00000567572 LYPD5Q6UWN5 251 aa11.95□□□□□ -0.5
CMTM3-214ENST00000567572 TM2D3Q9BRN9 247 aa11.94□□□□□ -0.5
CMTM3-214ENST00000567572 KLK12Q9UKR0 248 aa11.94□□□□□ -0.5
CMTM3-214ENST00000567572 C9orf116Q5BN46 136 aaPredicted RBP11.94□□□□□ -0.5
CMTM3-214ENST00000567572 S100A7L2Q5SY68 101 aa11.94□□□□□ -0.5
CMTM3-214ENST00000567572 ENHOQ6UWT2 76 aa11.94□□□□□ -0.5
CMTM3-214ENST00000567572 FAM236AA0A1B0GUQ0 79 aa11.92□□□□□ -0.5
CMTM3-214ENST00000567572 FAM236BA0A1B0GV22 79 aa11.92□□□□□ -0.5
CMTM3-214ENST00000567572 PRR3P79522 188 aaKnown RBP11.92□□□□□ -0.5
CMTM3-214ENST00000567572 C9orf129Q5T035 196 aaKnown RBP11.92□□□□□ -0.5
CMTM3-214ENST00000567572 UNQ6190/PRO20217Q6UXQ8 127 aa11.92□□□□□ -0.5
CMTM3-214ENST00000567572 C11orf45Q8TAV5 145 aa11.92□□□□□ -0.5
CMTM3-214ENST00000567572 H3BQ85 93 aa11.92□□□□□ -0.5
CMTM3-214ENST00000567572 Q6JHZ5 121 aa11.92□□□□□ -0.5
CMTM3-214ENST00000567572 NCR3O14931 201 aa11.9□□□□□ -0.5
CMTM3-214ENST00000567572 IGLV6-57P01721 117 aa11.9□□□□□ -0.5
CMTM3-214ENST00000567572 SLPIP03973 132 aa11.9□□□□□ -0.5
CMTM3-214ENST00000567572 CCKP06307 115 aa11.9□□□□□ -0.5
CMTM3-214ENST00000567572 C6orf99Q4VX62 202 aa11.9□□□□□ -0.5
CMTM3-214ENST00000567572 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
CMTM3-214ENST00000567572 LINC00575Q6W349 94 aa11.9□□□□□ -0.51
CMTM3-214ENST00000567572 CCDC179H3BU77 68 aa11.89□□□□□ -0.51
CMTM3-214ENST00000567572 C6orf223Q8N319 242 aa11.89□□□□□ -0.51
CMTM3-214ENST00000567572 SS18L2Q9UHA2 77 aa11.89□□□□□ -0.51
CMTM3-214ENST00000567572 MGAM2Q2M2H8 2515 aa11.88□□□□□ -0.51
CMTM3-214ENST00000567572 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
CMTM3-214ENST00000567572 Q8NDZ9 215 aa11.88□□□□□ -0.51
CMTM3-214ENST00000567572 B5MCH6 92 aa11.88□□□□□ -0.51
CMTM3-214ENST00000567572 MRAPQ8TCY5 172 aa11.86□□□□□ -0.51
CMTM3-214ENST00000567572 LINC00846Q9NV44 126 aa11.86□□□□□ -0.51
CMTM3-214ENST00000567572 HIST1H4AP62805 103 aaKnown RBP11.86□□□□□ -0.51
CMTM3-214ENST00000567572 C6orf48Q9UBA6 75 aa11.86□□□□□ -0.51
CMTM3-214ENST00000567572 hADV29S1A0JD25 119 aa11.85□□□□□ -0.51
CMTM3-214ENST00000567572 F8WDY8 70 aa11.85□□□□□ -0.51
CMTM3-214ENST00000567572 ATP5EP2Q5VTU8 51 aa11.85□□□□□ -0.51
CMTM3-214ENST00000567572 WFDC10BQ8IUB3 73 aa11.84□□□□□ -0.51
CMTM3-214ENST00000567572 C2orf48Q96LS8 159 aa11.83□□□□□ -0.52
CMTM3-214ENST00000567572 ZNF561-AS1K7EIQ3 104 aa11.82□□□□□ -0.52
CMTM3-214ENST00000567572 GHRHP01286 108 aa11.82□□□□□ -0.52
CMTM3-214ENST00000567572 RPL18AQ02543 176 aaKnown RBP11.82□□□□□ -0.52
CMTM3-214ENST00000567572 ESRGQ1W209 222 aa11.82□□□□□ -0.52
CMTM3-214ENST00000567572 HUWE1Q7Z6Z7 4374 aaKnown RBP11.82□□□□□ -0.52
CMTM3-214ENST00000567572 TRBV7-6A0A0J9YX20 115 aa11.82□□□□□ -0.52
CMTM3-214ENST00000567572 ATOX1O00244 68 aa11.82□□□□□ -0.52
CMTM3-214ENST00000567572 KRTAP26-1Q6PEX3 210 aa11.82□□□□□ -0.52
CMTM3-214ENST00000567572 TRAV10A0A0B4J240 114 aa11.81□□□□□ -0.52
CMTM3-214ENST00000567572 DIRC1Q969H9 104 aa11.8□□□□□ -0.52
CMTM3-214ENST00000567572 LINC00526Q96FQ7 95 aa11.8□□□□□ -0.52
CMTM3-214ENST00000567572 TRAV23DV6A0A075B6W5 121 aa11.8□□□□□ -0.52
CMTM3-214ENST00000567572 UQCRQO14949 82 aa11.8□□□□□ -0.52
CMTM3-214ENST00000567572 CAMK2N2Q96S95 79 aa11.8□□□□□ -0.52
CMTM3-214ENST00000567572 LOC110117498A0A087WWA1 95 aa11.79□□□□□ -0.52
CMTM3-214ENST00000567572 PDE6GP18545 87 aa11.78□□□□□ -0.52
CMTM3-214ENST00000567572 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
CMTM3-214ENST00000567572 C3orf22Q8N5N4 141 aa11.78□□□□□ -0.52
CMTM3-214ENST00000567572 TRBV10-3A0A0K0K1G6 114 aa11.77□□□□□ -0.53
CMTM3-214ENST00000567572 RBM3P98179 157 aaKnown RBP11.76□□□□□ -0.53
CMTM3-214ENST00000567572 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.76□□□□□ -0.53
CMTM3-214ENST00000567572 NDUFC2-KCTD14E9PQ53 114 aa11.75□□□□□ -0.53
CMTM3-214ENST00000567572 ZNF73O43830 326 aaPredicted RBP11.75□□□□□ -0.53
CMTM3-214ENST00000567572 VPREB1P12018 145 aa11.75□□□□□ -0.53
CMTM3-214ENST00000567572 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
CMTM3-214ENST00000567572 C1orf43Q9BWL3 253 aa11.75□□□□□ -0.53
CMTM3-214ENST00000567572 M0R378 163 aa11.74□□□□□ -0.53
CMTM3-214ENST00000567572 UBL5Q9BZL1 73 aa11.74□□□□□ -0.53
CMTM3-214ENST00000567572 COX7CP15954 63 aa11.74□□□□□ -0.53
CMTM3-214ENST00000567572 ELOF1P60002 83 aaKnown RBP11.74□□□□□ -0.53
CMTM3-214ENST00000567572 Q6ZQT0 140 aa11.74□□□□□ -0.53
CMTM3-214ENST00000567572 XAGE1AQ9HD64 81 aa11.74□□□□□ -0.53
CMTM3-214ENST00000567572 IGKV3D-7A0A0C4DH55 119 aa11.73□□□□□ -0.53
CMTM3-214ENST00000567572 COX7BP24311 80 aa11.73□□□□□ -0.53
CMTM3-214ENST00000567572 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
CMTM3-214ENST00000567572 Q6ZQY7 126 aa11.72□□□□□ -0.53
CMTM3-214ENST00000567572 SMIM20Q8N5G0 67 aa11.72□□□□□ -0.53
CMTM3-214ENST00000567572 Q6ZRU5 148 aa11.72□□□□□ -0.53
CMTM3-214ENST00000567572 LAMTOR3Q9UHA4 124 aa11.72□□□□□ -0.53
CMTM3-214ENST00000567572 COL7A1Q02388 2944 aa11.71□□□□□ -0.53
CMTM3-214ENST00000567572 C9orf153Q5TBE3 101 aa11.7□□□□□ -0.54
CMTM3-214ENST00000567572 DNAH10OSP0CZ25 163 aa11.7□□□□□ -0.54
CMTM3-214ENST00000567572 DSCR8Q96T75 97 aa11.7□□□□□ -0.54
CMTM3-214ENST00000567572 B9D2Q9BPU9 175 aa11.7□□□□□ -0.54
CMTM3-214ENST00000567572 DNAH9Q9NYC9 4486 aa11.68□□□□□ -0.54
CMTM3-214ENST00000567572 LINC00588Q9Y4M8 146 aa11.68□□□□□ -0.54
CMTM3-214ENST00000567572 CRYGAP11844 174 aa11.67□□□□□ -0.54
CMTM3-214ENST00000567572 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
CMTM3-214ENST00000567572 SERP2Q8N6R1 65 aa11.66□□□□□ -0.54
CMTM3-214ENST00000567572 IGKV2D-24A0A075B6R9 120 aa11.65□□□□□ -0.54
CMTM3-214ENST00000567572 SYCNQ0VAF6 134 aa11.65□□□□□ -0.54
CMTM3-214ENST00000567572 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
CMTM3-214ENST00000567572 LINC00528Q8N1L1 170 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms