RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PLA2G2DQ9UNK4 145 aa7.63□□□□□ -1.19
SF3B3-208ENST00000567250 SMIM13P0DJ93 91 aa7.62□□□□□ -1.19
SF3B3-208ENST00000567250 ATOH7Q8N100 152 aa7.62□□□□□ -1.19
SF3B3-208ENST00000567250 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
SF3B3-208ENST00000567250 SND1-IT1Q9HBX3 110 aa7.62□□□□□ -1.19
SF3B3-208ENST00000567250 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
SF3B3-208ENST00000567250 SRRM2Q9UQ35 2752 aaKnown RBP7.62□□□□□ -1.19
SF3B3-208ENST00000567250 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
SF3B3-208ENST00000567250 UBE2BP63146 152 aa7.61□□□□□ -1.19
SF3B3-208ENST00000567250 RPL24P83731 157 aaKnown RBP7.61□□□□□ -1.19
SF3B3-208ENST00000567250 LBHQ53QV2 105 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-208ENST00000567250 PHF5AQ7RTV0 110 aaKnown RBP7.61□□□□□ -1.19
SF3B3-208ENST00000567250 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
SF3B3-208ENST00000567250 SCGB1D1O95968 90 aa7.6□□□□□ -1.19
SF3B3-208ENST00000567250 SERTAD4-AS1Q5TG53 156 aa7.6□□□□□ -1.19
SF3B3-208ENST00000567250 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
SF3B3-208ENST00000567250 MIEN1Q9BRT3 115 aa7.6□□□□□ -1.19
SF3B3-208ENST00000567250 TMA7Q9Y2S6 64 aaKnown RBP7.6□□□□□ -1.19
SF3B3-208ENST00000567250 IGLV5-37A0A075B6J1 123 aa7.59□□□□□ -1.19
SF3B3-208ENST00000567250 A0A0J9YXY3 114 aa7.59□□□□□ -1.19
SF3B3-208ENST00000567250 PRR3P79522 188 aaKnown RBP7.59□□□□□ -1.19
SF3B3-208ENST00000567250 MRPL55Q7Z7F7 128 aaKnown RBP7.59□□□□□ -1.19
SF3B3-208ENST00000567250 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
SF3B3-208ENST00000567250 C22orf24Q9Y442 160 aa7.59□□□□□ -1.19
SF3B3-208ENST00000567250 IGKV2D-26A0A0A0MRZ7 120 aa7.58□□□□□ -1.2
SF3B3-208ENST00000567250 ANKRD39Q53RE8 183 aa7.58□□□□□ -1.2
SF3B3-208ENST00000567250 KRTAP7-1Q8IUC3 87 aa7.58□□□□□ -1.2
SF3B3-208ENST00000567250 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
SF3B3-208ENST00000567250 TIMM17BO60830 172 aa7.57□□□□□ -1.2
SF3B3-208ENST00000567250 INAFM2P0DMQ5 153 aa7.57□□□□□ -1.2
SF3B3-208ENST00000567250 SCGB1D4Q6XE38 83 aa7.57□□□□□ -1.2
SF3B3-208ENST00000567250 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
SF3B3-208ENST00000567250 VPREB1P12018 145 aa7.56□□□□□ -1.2
SF3B3-208ENST00000567250 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-208ENST00000567250 BOD1L2Q8IYS8 172 aa7.56□□□□□ -1.2
SF3B3-208ENST00000567250 PSORS1C2Q9UIG4 136 aa7.56□□□□□ -1.2
SF3B3-208ENST00000567250 FAT1Q14517 4588 aa7.56□□□□□ -1.2
SF3B3-208ENST00000567250 C1orf137Q5JT78 98 aa7.55□□□□□ -1.2
SF3B3-208ENST00000567250 DAND5Q8N907 189 aa7.54□□□□□ -1.2
SF3B3-208ENST00000567250 COPS9Q8WXC6 57 aa7.54□□□□□ -1.2
SF3B3-208ENST00000567250 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
SF3B3-208ENST00000567250 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
SF3B3-208ENST00000567250 LOC107984156A0A0G2JMH3 177 aa7.53□□□□□ -1.2
SF3B3-208ENST00000567250 JOSD1Q15040 202 aaPredicted RBP7.53□□□□□ -1.2
SF3B3-208ENST00000567250 ARL17AQ8IVW1 177 aa7.53□□□□□ -1.2
SF3B3-208ENST00000567250 LINC00167Q96N53 147 aa7.53□□□□□ -1.2
SF3B3-208ENST00000567250 GAGE10A6NGK3 116 aa7.52□□□□□ -1.21
SF3B3-208ENST00000567250 M0R378 163 aa7.52□□□□□ -1.21
SF3B3-208ENST00000567250 PCP2Q8IVA1 136 aa7.52□□□□□ -1.21
SF3B3-208ENST00000567250 NDUFC2O95298 119 aa7.51□□□□□ -1.21
SF3B3-208ENST00000567250 S100A12P80511 92 aa7.51□□□□□ -1.21
SF3B3-208ENST00000567250 Q6ZVH6 145 aa7.51□□□□□ -1.21
SF3B3-208ENST00000567250 LITAFQ99732 161 aa7.51□□□□□ -1.21
SF3B3-208ENST00000567250 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
SF3B3-208ENST00000567250 SPANXDQ9BXN6 97 aa7.51□□□□□ -1.21
SF3B3-208ENST00000567250 SPANXB1Q9NS25 103 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-208ENST00000567250 SPANXCQ9NY87 97 aa7.51□□□□□ -1.21
SF3B3-208ENST00000567250 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
SF3B3-208ENST00000567250 RPL37AP8A6NKH3 93 aa7.5□□□□□ -1.21
SF3B3-208ENST00000567250 NCR3O14931 201 aa7.5□□□□□ -1.21
SF3B3-208ENST00000567250 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
SF3B3-208ENST00000567250 NPC2P61916 151 aa7.5□□□□□ -1.21
SF3B3-208ENST00000567250 ADAMTSL4-AS1Q5T5F5 129 aa7.5□□□□□ -1.21
SF3B3-208ENST00000567250 SPINK6Q6UWN8 80 aa7.5□□□□□ -1.21
SF3B3-208ENST00000567250 IGLV1-50A0A075B6I6 118 aa7.49□□□□□ -1.21
SF3B3-208ENST00000567250 TRBV10-2A0A0K0K1G8 114 aa7.49□□□□□ -1.21
SF3B3-208ENST00000567250 IGLV7-43P04211 117 aa7.49□□□□□ -1.21
SF3B3-208ENST00000567250 KRTAP11-1Q8IUC1 163 aa7.49□□□□□ -1.21
SF3B3-208ENST00000567250 Q8NDZ9 215 aa7.49□□□□□ -1.21
SF3B3-208ENST00000567250 LINC00308Q8TCZ7 52 aa7.49□□□□□ -1.21
SF3B3-208ENST00000567250 IFITM1P13164 125 aa7.48□□□□□ -1.21
SF3B3-208ENST00000567250 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
SF3B3-208ENST00000567250 SPATA45Q537H7 98 aa7.48□□□□□ -1.21
SF3B3-208ENST00000567250 PPDPFQ9H3Y8 114 aa7.48□□□□□ -1.21
SF3B3-208ENST00000567250 PAM16Q9Y3D7 125 aa7.48□□□□□ -1.21
SF3B3-208ENST00000567250 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
SF3B3-208ENST00000567250 PRYO14603 147 aa7.47□□□□□ -1.21
SF3B3-208ENST00000567250 BCE1O60756 84 aa7.47□□□□□ -1.21
SF3B3-208ENST00000567250 REG3GQ6UW15 175 aa7.47□□□□□ -1.21
SF3B3-208ENST00000567250 SOSTDC1Q6X4U4 206 aa7.47□□□□□ -1.21
SF3B3-208ENST00000567250 CBY1Q9Y3M2 126 aa7.47□□□□□ -1.21
SF3B3-208ENST00000567250 COX8AP10176 69 aa7.46□□□□□ -1.22
SF3B3-208ENST00000567250 DDTP30046 118 aa7.46□□□□□ -1.22
SF3B3-208ENST00000567250 RPL28P46779 137 aaKnown RBP7.46□□□□□ -1.22
SF3B3-208ENST00000567250 PYY3Q5JQD4 70 aa7.46□□□□□ -1.22
SF3B3-208ENST00000567250 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
SF3B3-208ENST00000567250 DIRC1Q969H9 104 aa7.46□□□□□ -1.22
SF3B3-208ENST00000567250 TMEM126AQ9H061 195 aa7.46□□□□□ -1.22
SF3B3-208ENST00000567250 DLEU1O43261 78 aa7.45□□□□□ -1.22
SF3B3-208ENST00000567250 UBE2AP49459 152 aa7.45□□□□□ -1.22
SF3B3-208ENST00000567250 SRSF9Q13242 221 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3B3-208ENST00000567250 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
SF3B3-208ENST00000567250 TRBV10-3A0A0K0K1G6 114 aa7.44□□□□□ -1.22
SF3B3-208ENST00000567250 ZNF861PO60384 105 aa7.44□□□□□ -1.22
SF3B3-208ENST00000567250 H0Y9J4 135 aa7.43□□□□□ -1.22
SF3B3-208ENST00000567250 OXTP01178 125 aa7.43□□□□□ -1.22
SF3B3-208ENST00000567250 SLC25A34Q6PIV7 304 aa7.43□□□□□ -1.22
SF3B3-208ENST00000567250 FAM19A1Q7Z5A9 133 aa7.43□□□□□ -1.22
SF3B3-208ENST00000567250 KCNQ1DNQ9H478 68 aa7.43□□□□□ -1.22
SF3B3-208ENST00000567250 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms