RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 TOMM6Q96B49 74 aa4.38□□□□□ -1.71
SIN3A-207ENST00000566640 C2orf48Q96LS8 159 aa4.38□□□□□ -1.71
SIN3A-207ENST00000566640 SCGB3A1Q96QR1 104 aa4.38□□□□□ -1.71
SIN3A-207ENST00000566640 PKIGQ9Y2B9 76 aa4.38□□□□□ -1.71
SIN3A-207ENST00000566640 A0A087WZ39 114 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 K7EMI3 77 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
SIN3A-207ENST00000566640 LINC00469Q8N7U9 141 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 IFI27L1Q96BM0 104 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 AMELXQ99217 191 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 GEMIN7Q9H840 131 aaKnown RBP4.37□□□□□ -1.71
SIN3A-207ENST00000566640 LINC00474Q9P2X8 69 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
SIN3A-207ENST00000566640 FAM168BA1KXE4 195 aa4.36□□□□□ -1.71
SIN3A-207ENST00000566640 PRSS2P07478 247 aa4.36□□□□□ -1.71
SIN3A-207ENST00000566640 HERVK_113P63121 156 aa4.36□□□□□ -1.71
SIN3A-207ENST00000566640 PRR3P79522 188 aaKnown RBP4.36□□□□□ -1.71
SIN3A-207ENST00000566640 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
SIN3A-207ENST00000566640 LINC01545Q5VT33 79 aa4.36□□□□□ -1.71
SIN3A-207ENST00000566640 C12orf57Q99622 126 aa4.36□□□□□ -1.71
SIN3A-207ENST00000566640 PMCHL2Q9BQD1 86 aa4.36□□□□□ -1.71
SIN3A-207ENST00000566640 CDKN2A-AS1Q9UH64 79 aa4.36□□□□□ -1.71
SIN3A-207ENST00000566640 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 SPINK8P0C7L1 97 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 SMIM6P0DI80 62 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 G0S2P27469 103 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 KIAA0087Q14695 138 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 Q6ZRP5 223 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 PHF5AQ7RTV0 110 aaKnown RBP4.35□□□□□ -1.71
SIN3A-207ENST00000566640 ERASQ7Z444 233 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 LINC01600Q96MT4 127 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 MRPL35Q9NZE8 188 aaKnown RBP4.35□□□□□ -1.71
SIN3A-207ENST00000566640 HSPB8Q9UJY1 196 aa4.35□□□□□ -1.71
SIN3A-207ENST00000566640 CKS1BP61024 79 aa4.34□□□□□ -1.71
SIN3A-207ENST00000566640 MAP1LC3CQ9BXW4 147 aa4.34□□□□□ -1.71
SIN3A-207ENST00000566640 TRBV30A0A0K0K1B3 111 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 PCP4L1A6NKN8 68 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 SMIM1B2RUZ4 78 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 ATP5LO75964 103 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 SEC11AP67812 179 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 PMVKQ15126 192 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 C6orf226Q5I0X4 101 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 Q8IZM0 81 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 CST9LQ9H4G1 147 aa4.33□□□□□ -1.72
SIN3A-207ENST00000566640 TRAV12-1A0A0B4J245 112 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 TINCRA0A1B0GVN0 87 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 M0QXV9 152 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 FAM19A3Q7Z5A8 133 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
SIN3A-207ENST00000566640 LINC01549A6NIU2 74 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 F8VRH5 84 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 TLX1NBP0CAT3 122 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 UBE2BP63146 152 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 SRSF9Q13242 221 aaKnown RBP eCLIP4.31□□□□□ -1.72
SIN3A-207ENST00000566640 C1orf137Q5JT78 98 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
SIN3A-207ENST00000566640 LINC01561Q8N1V8 128 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 PRO1933Q9H354 126 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
SIN3A-207ENST00000566640 CHTOPQ9Y3Y2 248 aaKnown RBP4.31□□□□□ -1.72
SIN3A-207ENST00000566640 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 IGKV2D-26A0A0A0MRZ7 120 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 IGLV5-39A0A0G2JS06 123 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 C11orf86A6NJI1 115 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 H3BRM9 83 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 IGLC3P0DOY3 106 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 ZNF22P17026 224 aaPredicted RBP4.3□□□□□ -1.72
SIN3A-207ENST00000566640 SPINK6Q6UWN8 80 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 TP73-AS1Q9UF72 201 aa4.3□□□□□ -1.72
SIN3A-207ENST00000566640 CXCL5P42830 114 aa4.29□□□□□ -1.72
SIN3A-207ENST00000566640 TMEM170BQ5T4T1 132 aa4.29□□□□□ -1.72
SIN3A-207ENST00000566640 KRTAP11-1Q8IUC1 163 aa4.29□□□□□ -1.72
SIN3A-207ENST00000566640 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
SIN3A-207ENST00000566640 DPM2O94777 84 aa4.28□□□□□ -1.72
SIN3A-207ENST00000566640 IGKCP01834 107 aa4.28□□□□□ -1.72
SIN3A-207ENST00000566640 PFN2P35080 140 aa4.28□□□□□ -1.72
SIN3A-207ENST00000566640 SPATA45Q537H7 98 aa4.28□□□□□ -1.72
SIN3A-207ENST00000566640 ZNF625Q96I27 306 aaPredicted RBP4.28□□□□□ -1.72
SIN3A-207ENST00000566640 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
SIN3A-207ENST00000566640 TTTY13Q9BZ97 58 aa4.28□□□□□ -1.72
SIN3A-207ENST00000566640 LPAP08519 4548 aa4.27□□□□□ -1.73
SIN3A-207ENST00000566640 C20orf202A1L168 122 aa4.27□□□□□ -1.73
SIN3A-207ENST00000566640 REG3GQ6UW15 175 aa4.27□□□□□ -1.73
SIN3A-207ENST00000566640 PCP2Q8IVA1 136 aa4.27□□□□□ -1.73
SIN3A-207ENST00000566640 VAMP8Q9BV40 100 aa4.27□□□□□ -1.73
SIN3A-207ENST00000566640 TMEM223A0PJW6 202 aa4.26□□□□□ -1.73
SIN3A-207ENST00000566640 TSPEAR-AS2P59090 65 aa4.26□□□□□ -1.73
SIN3A-207ENST00000566640 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
SIN3A-207ENST00000566640 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
SIN3A-207ENST00000566640 LINC00587B1AMM8 73 aa4.25□□□□□ -1.73
SIN3A-207ENST00000566640 IGLV7-43P04211 117 aa4.25□□□□□ -1.73
SIN3A-207ENST00000566640 PLNP26678 52 aa4.25□□□□□ -1.73
SIN3A-207ENST00000566640 S100A12P80511 92 aa4.25□□□□□ -1.73
SIN3A-207ENST00000566640 NKAPP1Q8N9T2 125 aa4.25□□□□□ -1.73
SIN3A-207ENST00000566640 MIEN1Q9BRT3 115 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms