RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
GDPD3-204ENST00000566434 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
GDPD3-204ENST00000566434 PSORS1C2Q9UIG4 136 aa8.04□□□□□ -1.12
GDPD3-204ENST00000566434 E9PLD3 99 aa8.03□□□□□ -1.12
GDPD3-204ENST00000566434 NMUP48645 174 aa8.03□□□□□ -1.12
GDPD3-204ENST00000566434 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
GDPD3-204ENST00000566434 PLA2G2DQ9UNK4 145 aa8.02□□□□□ -1.13
GDPD3-204ENST00000566434 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
GDPD3-204ENST00000566434 RPL24P83731 157 aaKnown RBP8.01□□□□□ -1.13
GDPD3-204ENST00000566434 HIST1H2BLQ99880 126 aa8.01□□□□□ -1.13
GDPD3-204ENST00000566434 TP73-AS1Q9UF72 201 aa8.01□□□□□ -1.13
GDPD3-204ENST00000566434 AKR1D1P51857 326 aa8□□□□□ -1.13
GDPD3-204ENST00000566434 SNRPEP62304 92 aaKnown RBP8□□□□□ -1.13
GDPD3-204ENST00000566434 MIR7-3HGQ8N6C7 128 aa8□□□□□ -1.13
GDPD3-204ENST00000566434 IGLV5-37A0A075B6J1 123 aa7.99□□□□□ -1.13
GDPD3-204ENST00000566434 J3QL48 77 aa7.99□□□□□ -1.13
GDPD3-204ENST00000566434 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
GDPD3-204ENST00000566434 ATOH7Q8N100 152 aa7.99□□□□□ -1.13
GDPD3-204ENST00000566434 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
GDPD3-204ENST00000566434 VPREB1P12018 145 aa7.98□□□□□ -1.13
GDPD3-204ENST00000566434 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
GDPD3-204ENST00000566434 IGLV7-43P04211 117 aa7.97□□□□□ -1.13
GDPD3-204ENST00000566434 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
GDPD3-204ENST00000566434 BOD1L2Q8IYS8 172 aa7.97□□□□□ -1.13
GDPD3-204ENST00000566434 DAND5Q8N907 189 aa7.97□□□□□ -1.13
GDPD3-204ENST00000566434 A0A0J9YXY3 114 aa7.96□□□□□ -1.14
GDPD3-204ENST00000566434 ZNF815PA8K554 130 aa7.96□□□□□ -1.14
GDPD3-204ENST00000566434 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.14
GDPD3-204ENST00000566434 IGKV2-28A0A075B6P5 120 aa7.95□□□□□ -1.14
GDPD3-204ENST00000566434 IGKV2D-26A0A0A0MRZ7 120 aa7.95□□□□□ -1.14
GDPD3-204ENST00000566434 OXTP01178 125 aa7.95□□□□□ -1.14
GDPD3-204ENST00000566434 IGKV2D-28P01615 120 aa7.95□□□□□ -1.14
GDPD3-204ENST00000566434 C5orf52A6NGY3 159 aa7.94□□□□□ -1.14
GDPD3-204ENST00000566434 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
GDPD3-204ENST00000566434 NCR3O14931 201 aa7.94□□□□□ -1.14
GDPD3-204ENST00000566434 ANKRD39Q53RE8 183 aa7.94□□□□□ -1.14
GDPD3-204ENST00000566434 REG3GQ6UW15 175 aa7.94□□□□□ -1.14
GDPD3-204ENST00000566434 Q8NDZ9 215 aa7.94□□□□□ -1.14
GDPD3-204ENST00000566434 HSBP1L1C9JCN9 74 aa7.93□□□□□ -1.14
GDPD3-204ENST00000566434 NPC2P61916 151 aa7.93□□□□□ -1.14
GDPD3-204ENST00000566434 SRSF9Q13242 221 aaKnown RBP eCLIP7.93□□□□□ -1.14
GDPD3-204ENST00000566434 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
GDPD3-204ENST00000566434 TTTY13Q9BZ97 58 aa7.93□□□□□ -1.14
GDPD3-204ENST00000566434 M0R378 163 aa7.92□□□□□ -1.14
GDPD3-204ENST00000566434 BCE1O60756 84 aa7.92□□□□□ -1.14
GDPD3-204ENST00000566434 SCGB1D1O95968 90 aa7.92□□□□□ -1.14
GDPD3-204ENST00000566434 SCGB1D4Q6XE38 83 aa7.92□□□□□ -1.14
GDPD3-204ENST00000566434 PKHD1L1Q86WI1 4243 aa7.91□□□□□ -1.14
GDPD3-204ENST00000566434 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
GDPD3-204ENST00000566434 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
GDPD3-204ENST00000566434 TIMM17BO60830 172 aa7.9□□□□□ -1.14
GDPD3-204ENST00000566434 RPL28P46779 137 aaKnown RBP7.9□□□□□ -1.14
GDPD3-204ENST00000566434 UBE2AP49459 152 aa7.9□□□□□ -1.14
GDPD3-204ENST00000566434 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
GDPD3-204ENST00000566434 MYCBP2O75592 4640 aa7.9□□□□□ -1.15
GDPD3-204ENST00000566434 TMEM238C9JI98 176 aa7.89□□□□□ -1.15
GDPD3-204ENST00000566434 H0Y9J4 135 aa7.89□□□□□ -1.15
GDPD3-204ENST00000566434 ZNF861PO60384 105 aa7.89□□□□□ -1.15
GDPD3-204ENST00000566434 LOC107984156A0A0G2JMH3 177 aa7.88□□□□□ -1.15
GDPD3-204ENST00000566434 S100A12P80511 92 aa7.88□□□□□ -1.15
GDPD3-204ENST00000566434 FAM19A1Q7Z5A9 133 aa7.88□□□□□ -1.15
GDPD3-204ENST00000566434 ARL17AQ8IVW1 177 aa7.88□□□□□ -1.15
GDPD3-204ENST00000566434 TMEM126AQ9H061 195 aa7.88□□□□□ -1.15
GDPD3-204ENST00000566434 TMA7Q9Y2S6 64 aaKnown RBP7.88□□□□□ -1.15
GDPD3-204ENST00000566434 SOSTDC1Q6X4U4 206 aa7.87□□□□□ -1.15
GDPD3-204ENST00000566434 PCP2Q8IVA1 136 aa7.87□□□□□ -1.15
GDPD3-204ENST00000566434 LITAFQ99732 161 aa7.87□□□□□ -1.15
GDPD3-204ENST00000566434 SPANXB1Q9NS25 103 aaPredicted RBP7.87□□□□□ -1.15
GDPD3-204ENST00000566434 PRYO14603 147 aa7.86□□□□□ -1.15
GDPD3-204ENST00000566434 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
GDPD3-204ENST00000566434 LINC00308Q8TCZ7 52 aa7.86□□□□□ -1.15
GDPD3-204ENST00000566434 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
GDPD3-204ENST00000566434 TRBV10-2A0A0K0K1G8 114 aa7.85□□□□□ -1.15
GDPD3-204ENST00000566434 NDUFC2O95298 119 aa7.85□□□□□ -1.15
GDPD3-204ENST00000566434 DDTP30046 118 aa7.85□□□□□ -1.15
GDPD3-204ENST00000566434 PRLHP81277 87 aa7.85□□□□□ -1.15
GDPD3-204ENST00000566434 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
GDPD3-204ENST00000566434 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
GDPD3-204ENST00000566434 COPS9Q8WXC6 57 aa7.84□□□□□ -1.15
GDPD3-204ENST00000566434 SPANXCQ9NY87 97 aa7.84□□□□□ -1.15
GDPD3-204ENST00000566434 SPANXDQ9BXN6 97 aa7.83□□□□□ -1.16
GDPD3-204ENST00000566434 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
GDPD3-204ENST00000566434 ETDCA0A1B0GVM5 59 aa7.82□□□□□ -1.16
GDPD3-204ENST00000566434 KCNQ1DNQ9H478 68 aa7.82□□□□□ -1.16
GDPD3-204ENST00000566434 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
GDPD3-204ENST00000566434 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
GDPD3-204ENST00000566434 KRTAP13-1Q8IUC0 172 aa7.81□□□□□ -1.16
GDPD3-204ENST00000566434 OR13C6PQ8NH95 151 aa7.81□□□□□ -1.16
GDPD3-204ENST00000566434 IFITM1P13164 125 aa7.8□□□□□ -1.16
GDPD3-204ENST00000566434 Q6ZVH6 145 aa7.8□□□□□ -1.16
GDPD3-204ENST00000566434 HIGD2AQ9BW72 106 aa7.8□□□□□ -1.16
GDPD3-204ENST00000566434 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
GDPD3-204ENST00000566434 LINC00337Q8N6G1 96 aa7.79□□□□□ -1.16
GDPD3-204ENST00000566434 PRR26Q8N8Z3 221 aa7.79□□□□□ -1.16
GDPD3-204ENST00000566434 VAMP8Q9BV40 100 aa7.79□□□□□ -1.16
GDPD3-204ENST00000566434 PAM16Q9Y3D7 125 aa7.79□□□□□ -1.16
GDPD3-204ENST00000566434 CBY1Q9Y3M2 126 aa7.79□□□□□ -1.16
GDPD3-204ENST00000566434 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
GDPD3-204ENST00000566434 KRTAP1-4P0C5Y4 121 aa7.78□□□□□ -1.16
GDPD3-204ENST00000566434 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms