RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 HERV-K104P63124 156 aa8.51□□□□□ -1.05
HERPUD1-210ENST00000565966 C1orf137Q5JT78 98 aa8.51□□□□□ -1.05
HERPUD1-210ENST00000565966 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
HERPUD1-210ENST00000565966 LINC00158P58513 81 aa8.5□□□□□ -1.05
HERPUD1-210ENST00000565966 UBE2BP63146 152 aa8.5□□□□□ -1.05
HERPUD1-210ENST00000565966 HIST3H2BBQ8N257 126 aa8.5□□□□□ -1.05
HERPUD1-210ENST00000565966 TP73-AS1Q9UF72 201 aa8.5□□□□□ -1.05
HERPUD1-210ENST00000565966 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
HERPUD1-210ENST00000565966 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
HERPUD1-210ENST00000565966 E9PLD3 99 aa8.49□□□□□ -1.05
HERPUD1-210ENST00000565966 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
HERPUD1-210ENST00000565966 LBHQ53QV2 105 aaPredicted RBP8.49□□□□□ -1.05
HERPUD1-210ENST00000565966 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-210ENST00000565966 MEIG1Q5JSS6 88 aa8.48□□□□□ -1.05
HERPUD1-210ENST00000565966 MRPL55Q7Z7F7 128 aaKnown RBP8.48□□□□□ -1.05
HERPUD1-210ENST00000565966 IGLV7-43P04211 117 aa8.47□□□□□ -1.05
HERPUD1-210ENST00000565966 S100A6P06703 90 aa8.47□□□□□ -1.05
HERPUD1-210ENST00000565966 NMUP48645 174 aa8.47□□□□□ -1.05
HERPUD1-210ENST00000565966 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
HERPUD1-210ENST00000565966 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
HERPUD1-210ENST00000565966 HIST1H2BLQ99880 126 aa8.47□□□□□ -1.05
HERPUD1-210ENST00000565966 C20orf202A1L168 122 aa8.46□□□□□ -1.06
HERPUD1-210ENST00000565966 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
HERPUD1-210ENST00000565966 VPREB1P12018 145 aa8.46□□□□□ -1.06
HERPUD1-210ENST00000565966 S100A2P29034 98 aa8.46□□□□□ -1.06
HERPUD1-210ENST00000565966 NKAPP1Q8N9T2 125 aa8.46□□□□□ -1.06
HERPUD1-210ENST00000565966 Q8NDZ9 215 aa8.46□□□□□ -1.06
HERPUD1-210ENST00000565966 LINC01600Q96MT4 127 aa8.46□□□□□ -1.06
HERPUD1-210ENST00000565966 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
HERPUD1-210ENST00000565966 MIR7-3HGQ8N6C7 128 aa8.45□□□□□ -1.06
HERPUD1-210ENST00000565966 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
HERPUD1-210ENST00000565966 SNRPEP62304 92 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-210ENST00000565966 RPL24P83731 157 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-210ENST00000565966 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
HERPUD1-210ENST00000565966 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
HERPUD1-210ENST00000565966 A0A0J9YXY3 114 aa8.42□□□□□ -1.06
HERPUD1-210ENST00000565966 C5orf52A6NGY3 159 aa8.42□□□□□ -1.06
HERPUD1-210ENST00000565966 ATOH7Q8N100 152 aa8.42□□□□□ -1.06
HERPUD1-210ENST00000565966 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
HERPUD1-210ENST00000565966 DAND5Q8N907 189 aa8.41□□□□□ -1.06
HERPUD1-210ENST00000565966 AKR1D1P51857 326 aa8.4□□□□□ -1.06
HERPUD1-210ENST00000565966 ANKRD39Q53RE8 183 aa8.4□□□□□ -1.06
HERPUD1-210ENST00000565966 BOD1L2Q8IYS8 172 aa8.4□□□□□ -1.06
HERPUD1-210ENST00000565966 TTTY13Q9BZ97 58 aa8.4□□□□□ -1.06
HERPUD1-210ENST00000565966 TNXBP22105 4242 aa8.4□□□□□ -1.06
HERPUD1-210ENST00000565966 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
HERPUD1-210ENST00000565966 IGKV2-28A0A075B6P5 120 aa8.39□□□□□ -1.07
HERPUD1-210ENST00000565966 LOC107984156A0A0G2JMH3 177 aa8.39□□□□□ -1.07
HERPUD1-210ENST00000565966 H0Y9J4 135 aa8.39□□□□□ -1.07
HERPUD1-210ENST00000565966 IGKV2D-28P01615 120 aa8.39□□□□□ -1.07
HERPUD1-210ENST00000565966 ARL17AQ8IVW1 177 aa8.39□□□□□ -1.07
HERPUD1-210ENST00000565966 ZNF815PA8K554 130 aa8.38□□□□□ -1.07
HERPUD1-210ENST00000565966 ZNF861PO60384 105 aa8.38□□□□□ -1.07
HERPUD1-210ENST00000565966 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
HERPUD1-210ENST00000565966 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
HERPUD1-210ENST00000565966 M0R378 163 aa8.37□□□□□ -1.07
HERPUD1-210ENST00000565966 BCE1O60756 84 aa8.37□□□□□ -1.07
HERPUD1-210ENST00000565966 NCR3O14931 201 aa8.36□□□□□ -1.07
HERPUD1-210ENST00000565966 TIMM17BO60830 172 aa8.36□□□□□ -1.07
HERPUD1-210ENST00000565966 LITAFQ99732 161 aa8.36□□□□□ -1.07
HERPUD1-210ENST00000565966 EIF4EBP3O60516 100 aaPredicted RBP8.35□□□□□ -1.07
HERPUD1-210ENST00000565966 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
HERPUD1-210ENST00000565966 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
HERPUD1-210ENST00000565966 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-210ENST00000565966 NPC2P61916 151 aa8.34□□□□□ -1.07
HERPUD1-210ENST00000565966 MIEN1Q9BRT3 115 aa8.34□□□□□ -1.07
HERPUD1-210ENST00000565966 TMEM126AQ9H061 195 aa8.34□□□□□ -1.07
HERPUD1-210ENST00000565966 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
HERPUD1-210ENST00000565966 NDUFC2O95298 119 aa8.32□□□□□ -1.08
HERPUD1-210ENST00000565966 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
HERPUD1-210ENST00000565966 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
HERPUD1-210ENST00000565966 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
HERPUD1-210ENST00000565966 SCGB1D1O95968 90 aa8.31□□□□□ -1.08
HERPUD1-210ENST00000565966 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
HERPUD1-210ENST00000565966 UBE2AP49459 152 aa8.31□□□□□ -1.08
HERPUD1-210ENST00000565966 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-210ENST00000565966 TRBV10-3A0A0K0K1G6 114 aa8.3□□□□□ -1.08
HERPUD1-210ENST00000565966 HSBP1L1C9JCN9 74 aa8.3□□□□□ -1.08
HERPUD1-210ENST00000565966 SCGB1D4Q6XE38 83 aa8.3□□□□□ -1.08
HERPUD1-210ENST00000565966 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
HERPUD1-210ENST00000565966 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
HERPUD1-210ENST00000565966 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
HERPUD1-210ENST00000565966 PRYO14603 147 aa8.29□□□□□ -1.08
HERPUD1-210ENST00000565966 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
HERPUD1-210ENST00000565966 DDTP30046 118 aa8.28□□□□□ -1.08
HERPUD1-210ENST00000565966 PRLHP81277 87 aa8.28□□□□□ -1.08
HERPUD1-210ENST00000565966 SPANXDQ9BXN6 97 aa8.28□□□□□ -1.08
HERPUD1-210ENST00000565966 SPANXCQ9NY87 97 aa8.28□□□□□ -1.08
HERPUD1-210ENST00000565966 SPRR1AP35321 89 aa8.27□□□□□ -1.09
HERPUD1-210ENST00000565966 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
HERPUD1-210ENST00000565966 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-210ENST00000565966 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-210ENST00000565966 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
HERPUD1-210ENST00000565966 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
HERPUD1-210ENST00000565966 TMA7Q9Y2S6 64 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-210ENST00000565966 IFITM1P13164 125 aa8.24□□□□□ -1.09
HERPUD1-210ENST00000565966 S100A12P80511 92 aa8.24□□□□□ -1.09
HERPUD1-210ENST00000565966 Q6ZVH6 145 aa8.24□□□□□ -1.09
HERPUD1-210ENST00000565966 ETDCA0A1B0GVM5 59 aa8.23□□□□□ -1.09
HERPUD1-210ENST00000565966 JOSD1Q15040 202 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms