RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PHF5AQ7RTV0 110 aaKnown RBP10.38□□□□□ -0.75
RNF40-206ENST00000564260 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
RNF40-206ENST00000564260 SERTAD4-AS1Q5TG53 156 aa10.37□□□□□ -0.75
RNF40-206ENST00000564260 MRPL55Q7Z7F7 128 aaKnown RBP10.37□□□□□ -0.75
RNF40-206ENST00000564260 ABCA13Q86UQ4 5058 aa10.37□□□□□ -0.75
RNF40-206ENST00000564260 PCLOQ9Y6V0 5065 aa10.36□□□□□ -0.75
RNF40-206ENST00000564260 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
RNF40-206ENST00000564260 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
RNF40-206ENST00000564260 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
RNF40-206ENST00000564260 NKAPP1Q8N9T2 125 aa10.36□□□□□ -0.75
RNF40-206ENST00000564260 TIMM17BO60830 172 aa10.35□□□□□ -0.75
RNF40-206ENST00000564260 UBE2BP63146 152 aa10.35□□□□□ -0.75
RNF40-206ENST00000564260 MIR7-3HGQ8N6C7 128 aa10.35□□□□□ -0.75
RNF40-206ENST00000564260 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
RNF40-206ENST00000564260 IGKV2D-26A0A0A0MRZ7 120 aa10.33□□□□□ -0.76
RNF40-206ENST00000564260 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
RNF40-206ENST00000564260 HSBP1L1C9JCN9 74 aa10.33□□□□□ -0.76
RNF40-206ENST00000564260 VPREB1P12018 145 aa10.33□□□□□ -0.76
RNF40-206ENST00000564260 ZNF815PA8K554 130 aa10.31□□□□□ -0.76
RNF40-206ENST00000564260 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
RNF40-206ENST00000564260 MIEN1Q9BRT3 115 aa10.31□□□□□ -0.76
RNF40-206ENST00000564260 A0A0U1RRA0 63 aa10.3□□□□□ -0.76
RNF40-206ENST00000564260 NDUFC2O95298 119 aa10.29□□□□□ -0.76
RNF40-206ENST00000564260 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
RNF40-206ENST00000564260 ATOH7Q8N100 152 aa10.29□□□□□ -0.76
RNF40-206ENST00000564260 COPS9Q8WXC6 57 aa10.29□□□□□ -0.76
RNF40-206ENST00000564260 LINC00167Q96N53 147 aa10.29□□□□□ -0.76
RNF40-206ENST00000564260 M0R378 163 aa10.28□□□□□ -0.76
RNF40-206ENST00000564260 ANKRD39Q53RE8 183 aa10.28□□□□□ -0.76
RNF40-206ENST00000564260 BOD1L2Q8IYS8 172 aa10.28□□□□□ -0.76
RNF40-206ENST00000564260 PPDPFQ9H3Y8 114 aa10.28□□□□□ -0.76
RNF40-206ENST00000564260 TRBV10-2A0A0K0K1G8 114 aa10.27□□□□□ -0.77
RNF40-206ENST00000564260 TMEM238C9JI98 176 aa10.27□□□□□ -0.77
RNF40-206ENST00000564260 SCGB1D1O95968 90 aa10.27□□□□□ -0.77
RNF40-206ENST00000564260 OXTP01178 125 aa10.27□□□□□ -0.77
RNF40-206ENST00000564260 IGLV7-43P04211 117 aa10.27□□□□□ -0.77
RNF40-206ENST00000564260 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.77
RNF40-206ENST00000564260 Q6ZVH6 145 aa10.27□□□□□ -0.77
RNF40-206ENST00000564260 IGLV1-50A0A075B6I6 118 aa10.26□□□□□ -0.77
RNF40-206ENST00000564260 SCGB1D4Q6XE38 83 aa10.26□□□□□ -0.77
RNF40-206ENST00000564260 LITAFQ99732 161 aa10.25□□□□□ -0.77
RNF40-206ENST00000564260 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
RNF40-206ENST00000564260 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
RNF40-206ENST00000564260 BCE1O60756 84 aa10.24□□□□□ -0.77
RNF40-206ENST00000564260 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
RNF40-206ENST00000564260 S100A12P80511 92 aa10.24□□□□□ -0.77
RNF40-206ENST00000564260 KRTAP11-1Q8IUC1 163 aa10.24□□□□□ -0.77
RNF40-206ENST00000564260 SPANXDQ9BXN6 97 aa10.24□□□□□ -0.77
RNF40-206ENST00000564260 SPANXCQ9NY87 97 aa10.24□□□□□ -0.77
RNF40-206ENST00000564260 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
RNF40-206ENST00000564260 MYCBP2O75592 4640 aa10.23□□□□□ -0.77
RNF40-206ENST00000564260 JOSD1Q15040 202 aaPredicted RBP10.23□□□□□ -0.77
RNF40-206ENST00000564260 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
RNF40-206ENST00000564260 REG3GQ6UW15 175 aa10.23□□□□□ -0.77
RNF40-206ENST00000564260 DAND5Q8N907 189 aa10.23□□□□□ -0.77
RNF40-206ENST00000564260 DIRC1Q969H9 104 aa10.23□□□□□ -0.77
RNF40-206ENST00000564260 CBY1Q9Y3M2 126 aa10.23□□□□□ -0.77
RNF40-206ENST00000564260 IFITM1P13164 125 aa10.22□□□□□ -0.77
RNF40-206ENST00000564260 Q8NDZ9 215 aa10.22□□□□□ -0.77
RNF40-206ENST00000564260 GAGE10A6NGK3 116 aa10.21□□□□□ -0.77
RNF40-206ENST00000564260 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.77
RNF40-206ENST00000564260 ZNF861PO60384 105 aa10.21□□□□□ -0.77
RNF40-206ENST00000564260 PCP2Q8IVA1 136 aa10.21□□□□□ -0.77
RNF40-206ENST00000564260 LINC00308Q8TCZ7 52 aa10.21□□□□□ -0.77
RNF40-206ENST00000564260 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.77
RNF40-206ENST00000564260 PRYO14603 147 aa10.2□□□□□ -0.78
RNF40-206ENST00000564260 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
RNF40-206ENST00000564260 IGKV2-28A0A075B6P5 120 aa10.19□□□□□ -0.78
RNF40-206ENST00000564260 IGKV2D-28P01615 120 aa10.19□□□□□ -0.78
RNF40-206ENST00000564260 KCNQ1DNQ9H478 68 aa10.19□□□□□ -0.78
RNF40-206ENST00000564260 DLEU1O43261 78 aa10.18□□□□□ -0.78
RNF40-206ENST00000564260 LINC00518Q8N0U6 118 aa10.18□□□□□ -0.78
RNF40-206ENST00000564260 TMEM126AQ9H061 195 aa10.18□□□□□ -0.78
RNF40-206ENST00000564260 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
RNF40-206ENST00000564260 H0Y9J4 135 aa10.17□□□□□ -0.78
RNF40-206ENST00000564260 SOSTDC1Q6X4U4 206 aa10.17□□□□□ -0.78
RNF40-206ENST00000564260 TMA7Q9Y2S6 64 aaKnown RBP10.17□□□□□ -0.78
RNF40-206ENST00000564260 NCR3O14931 201 aa10.16□□□□□ -0.78
RNF40-206ENST00000564260 COX8AP10176 69 aa10.16□□□□□ -0.78
RNF40-206ENST00000564260 IGLV6-57P01721 117 aa10.15□□□□□ -0.78
RNF40-206ENST00000564260 DDTP30046 118 aa10.15□□□□□ -0.78
RNF40-206ENST00000564260 SPRR1AP35321 89 aa10.15□□□□□ -0.78
RNF40-206ENST00000564260 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
RNF40-206ENST00000564260 LINC00337Q8N6G1 96 aa10.15□□□□□ -0.78
RNF40-206ENST00000564260 VAMP8Q9BV40 100 aa10.15□□□□□ -0.78
RNF40-206ENST00000564260 UBE2AP49459 152 aa10.14□□□□□ -0.79
RNF40-206ENST00000564260 S100A7L2Q5SY68 101 aa10.14□□□□□ -0.79
RNF40-206ENST00000564260 LINC01600Q96MT4 127 aa10.14□□□□□ -0.79
RNF40-206ENST00000564260 TRBV10-3A0A0K0K1G6 114 aa10.13□□□□□ -0.79
RNF40-206ENST00000564260 J3QL48 77 aa10.12□□□□□ -0.79
RNF40-206ENST00000564260 NPC2P61916 151 aa10.12□□□□□ -0.79
RNF40-206ENST00000564260 EIF4EBP3O60516 100 aaPredicted RBP10.11□□□□□ -0.79
RNF40-206ENST00000564260 SPATA45Q537H7 98 aa10.11□□□□□ -0.79
RNF40-206ENST00000564260 FAT3Q8TDW7 4589 aa10.11□□□□□ -0.79
RNF40-206ENST00000564260 DMBT1Q9UGM3 2413 aaPredicted RBP10.1□□□□□ -0.79
RNF40-206ENST00000564260 PYY3Q5JQD4 70 aa10.1□□□□□ -0.79
RNF40-206ENST00000564260 FAM19A1Q7Z5A9 133 aa10.1□□□□□ -0.79
RNF40-206ENST00000564260 PAM16Q9Y3D7 125 aa10.1□□□□□ -0.79
RNF40-206ENST00000564260 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
RNF40-206ENST00000564260 KRTAP4-16G5E9R7 235 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms