RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 SPANXCQ9NY87 97 aa10.88□□□□□ -0.67
CMTM3-208ENST00000564247 ABCA13Q86UQ4 5058 aa10.88□□□□□ -0.67
CMTM3-208ENST00000564247 C2orf91Q6ZV80 131 aa10.87□□□□□ -0.67
CMTM3-208ENST00000564247 Q8N1X5 172 aa10.87□□□□□ -0.67
CMTM3-208ENST00000564247 HIST1H4GQ99525 98 aa10.87□□□□□ -0.67
CMTM3-208ENST00000564247 KRTAP4-5Q9BYR2 181 aa10.87□□□□□ -0.67
CMTM3-208ENST00000564247 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
CMTM3-208ENST00000564247 LINC00474Q9P2X8 69 aa10.87□□□□□ -0.67
CMTM3-208ENST00000564247 DNAH8Q96JB1 4490 aa10.87□□□□□ -0.67
CMTM3-208ENST00000564247 IFITM1P13164 125 aa10.86□□□□□ -0.67
CMTM3-208ENST00000564247 PTTG1IPP53801 180 aa10.86□□□□□ -0.67
CMTM3-208ENST00000564247 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
CMTM3-208ENST00000564247 IGKV2-24A0A0C4DH68 120 aa10.85□□□□□ -0.67
CMTM3-208ENST00000564247 XGP55808 180 aa10.85□□□□□ -0.67
CMTM3-208ENST00000564247 XAGE1AQ9HD64 81 aa10.85□□□□□ -0.67
CMTM3-208ENST00000564247 FAT1Q14517 4588 aa10.84□□□□□ -0.67
CMTM3-208ENST00000564247 A0A096LNI7 61 aa10.84□□□□□ -0.67
CMTM3-208ENST00000564247 NPC2P61916 151 aa10.84□□□□□ -0.67
CMTM3-208ENST00000564247 TAL2Q16559 108 aa10.84□□□□□ -0.67
CMTM3-208ENST00000564247 LINC00308Q8TCZ7 52 aa10.84□□□□□ -0.67
CMTM3-208ENST00000564247 MUSTN1Q8IVN3 82 aa10.83□□□□□ -0.68
CMTM3-208ENST00000564247 LOC107984156A0A0G2JMH3 177 aa10.82□□□□□ -0.68
CMTM3-208ENST00000564247 ARL17AQ8IVW1 177 aa10.82□□□□□ -0.68
CMTM3-208ENST00000564247 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
CMTM3-208ENST00000564247 HSD52Q0P140 79 aa10.81□□□□□ -0.68
CMTM3-208ENST00000564247 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
CMTM3-208ENST00000564247 PPDPFQ9H3Y8 114 aa10.8□□□□□ -0.68
CMTM3-208ENST00000564247 CHTF8P0CG12 524 aa10.79□□□□□ -0.68
CMTM3-208ENST00000564247 DDTP30046 118 aa10.79□□□□□ -0.68
CMTM3-208ENST00000564247 CTAG1AP78358 180 aa10.78□□□□□ -0.68
CMTM3-208ENST00000564247 SOSTDC1Q6X4U4 206 aa10.78□□□□□ -0.68
CMTM3-208ENST00000564247 CEND1Q8N111 149 aa10.78□□□□□ -0.68
CMTM3-208ENST00000564247 PLA2G2DQ9UNK4 145 aa10.78□□□□□ -0.68
CMTM3-208ENST00000564247 NDUFC2O95298 119 aa10.76□□□□□ -0.69
CMTM3-208ENST00000564247 SPACA4Q8TDM5 124 aa10.76□□□□□ -0.69
CMTM3-208ENST00000564247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.76□□□□□ -0.69
CMTM3-208ENST00000564247 EPM2AB3EWF7 344 aa10.75□□□□□ -0.69
CMTM3-208ENST00000564247 EIF4EBP3O60516 100 aaPredicted RBP10.75□□□□□ -0.69
CMTM3-208ENST00000564247 NKAPP1Q8N9T2 125 aa10.75□□□□□ -0.69
CMTM3-208ENST00000564247 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
CMTM3-208ENST00000564247 TMEM238LA0A1B0GVL6 79 aa10.74□□□□□ -0.69
CMTM3-208ENST00000564247 A6NJY4 79 aa10.74□□□□□ -0.69
CMTM3-208ENST00000564247 Q6ZSA8 131 aa10.74□□□□□ -0.69
CMTM3-208ENST00000564247 FAM19A5Q7Z5A7 132 aaPredicted RBP10.74□□□□□ -0.69
CMTM3-208ENST00000564247 A0A1W2PNN7 141 aa10.73□□□□□ -0.69
CMTM3-208ENST00000564247 FAM168BA1KXE4 195 aa10.73□□□□□ -0.69
CMTM3-208ENST00000564247 A4D1N5 150 aa10.73□□□□□ -0.69
CMTM3-208ENST00000564247 PCP4L1A6NKN8 68 aa10.73□□□□□ -0.69
CMTM3-208ENST00000564247 PANO1I0J062 215 aa10.73□□□□□ -0.69
CMTM3-208ENST00000564247 M0R143 59 aa10.73□□□□□ -0.69
CMTM3-208ENST00000564247 A0A087WYN8 130 aa10.72□□□□□ -0.69
CMTM3-208ENST00000564247 VPREB1P12018 145 aa10.72□□□□□ -0.69
CMTM3-208ENST00000564247 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
CMTM3-208ENST00000564247 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
CMTM3-208ENST00000564247 IGLV5-37A0A075B6J1 123 aa10.71□□□□□ -0.69
CMTM3-208ENST00000564247 M0R378 163 aa10.71□□□□□ -0.69
CMTM3-208ENST00000564247 HAMPP81172 84 aa10.71□□□□□ -0.69
CMTM3-208ENST00000564247 LBHQ53QV2 105 aaPredicted RBP10.71□□□□□ -0.69
CMTM3-208ENST00000564247 Q5VSD8 79 aa10.71□□□□□ -0.69
CMTM3-208ENST00000564247 C22orf24Q9Y442 160 aa10.71□□□□□ -0.69
CMTM3-208ENST00000564247 TRBV10-2A0A0K0K1G8 114 aa10.7□□□□□ -0.7
CMTM3-208ENST00000564247 SMR3BP02814 79 aaPredicted RBP10.7□□□□□ -0.7
CMTM3-208ENST00000564247 HINT1P49773 126 aaPredicted RBP10.7□□□□□ -0.7
CMTM3-208ENST00000564247 PRR3P79522 188 aaKnown RBP10.7□□□□□ -0.7
CMTM3-208ENST00000564247 PLAC8Q9NZF1 115 aa10.7□□□□□ -0.7
CMTM3-208ENST00000564247 NCR3O14931 201 aa10.69□□□□□ -0.7
CMTM3-208ENST00000564247 FXYD2P54710 66 aa10.69□□□□□ -0.7
CMTM3-208ENST00000564247 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
CMTM3-208ENST00000564247 Q8NDZ9 215 aa10.69□□□□□ -0.7
CMTM3-208ENST00000564247 M0QXV9 152 aa10.68□□□□□ -0.7
CMTM3-208ENST00000564247 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
CMTM3-208ENST00000564247 OR13C6PQ8NH95 151 aa10.68□□□□□ -0.7
CMTM3-208ENST00000564247 RAB37Q96AX2 223 aa10.68□□□□□ -0.7
CMTM3-208ENST00000564247 TRAV13-2A0A0B4J235 113 aa10.67□□□□□ -0.7
CMTM3-208ENST00000564247 FAM229AH3BQW9 127 aa10.67□□□□□ -0.7
CMTM3-208ENST00000564247 MRPL55Q7Z7F7 128 aaKnown RBP10.67□□□□□ -0.7
CMTM3-208ENST00000564247 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
CMTM3-208ENST00000564247 SRRM2Q9UQ35 2752 aaKnown RBP10.67□□□□□ -0.7
CMTM3-208ENST00000564247 IGKV2-28A0A075B6P5 120 aa10.66□□□□□ -0.7
CMTM3-208ENST00000564247 A6NDN8 102 aa10.66□□□□□ -0.7
CMTM3-208ENST00000564247 IGKV2D-28P01615 120 aa10.66□□□□□ -0.7
CMTM3-208ENST00000564247 CIRBP-AS1Q8TBR5 109 aa10.66□□□□□ -0.7
CMTM3-208ENST00000564247 GAGE10A6NGK3 116 aa10.65□□□□□ -0.7
CMTM3-208ENST00000564247 CFC1BP0CG36 223 aa10.65□□□□□ -0.7
CMTM3-208ENST00000564247 CFC1P0CG37 223 aa10.65□□□□□ -0.7
CMTM3-208ENST00000564247 C7orf33Q8WU49 177 aa10.65□□□□□ -0.7
CMTM3-208ENST00000564247 LINC00167Q96N53 147 aa10.65□□□□□ -0.7
CMTM3-208ENST00000564247 TMEM126AQ9H061 195 aa10.65□□□□□ -0.7
CMTM3-208ENST00000564247 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
CMTM3-208ENST00000564247 BATFQ16520 125 aa10.64□□□□□ -0.71
CMTM3-208ENST00000564247 SCXQ7RTU7 201 aa10.64□□□□□ -0.71
CMTM3-208ENST00000564247 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
CMTM3-208ENST00000564247 CBY1Q9Y3M2 126 aa10.64□□□□□ -0.71
CMTM3-208ENST00000564247 A0A0B4J2C4 111 aa10.63□□□□□ -0.71
CMTM3-208ENST00000564247 UBE2BP63146 152 aa10.63□□□□□ -0.71
CMTM3-208ENST00000564247 INAFM2P0DMQ5 153 aa10.62□□□□□ -0.71
CMTM3-208ENST00000564247 LINC00337Q8N6G1 96 aa10.62□□□□□ -0.71
CMTM3-208ENST00000564247 PRO1854Q9UHT4 67 aa10.62□□□□□ -0.71
CMTM3-208ENST00000564247 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
CMTM3-208ENST00000564247 RPL37AP8A6NKH3 93 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms