RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 PKHD1L1Q86WI1 4243 aa12.18□□□□□ -0.46
SLX1A-204ENST00000563995 MYMXA0A1B0GTQ4 84 aa12.17□□□□□ -0.46
SLX1A-204ENST00000563995 KRTAP7-1Q8IUC3 87 aa12.17□□□□□ -0.46
SLX1A-204ENST00000563995 LGALS3P17931 250 aaKnown RBP12.16□□□□□ -0.46
SLX1A-204ENST00000563995 NMUP48645 174 aa12.15□□□□□ -0.46
SLX1A-204ENST00000563995 AKR1D1P51857 326 aa12.14□□□□□ -0.47
SLX1A-204ENST00000563995 PHF5AQ7RTV0 110 aaKnown RBP12.14□□□□□ -0.47
SLX1A-204ENST00000563995 M0QXV9 152 aa12.13□□□□□ -0.47
SLX1A-204ENST00000563995 LINC00158P58513 81 aa12.13□□□□□ -0.47
SLX1A-204ENST00000563995 MEIG1Q5JSS6 88 aa12.13□□□□□ -0.47
SLX1A-204ENST00000563995 LINC00587B1AMM8 73 aa12.12□□□□□ -0.47
SLX1A-204ENST00000563995 SND1-IT1Q9HBX3 110 aa12.12□□□□□ -0.47
SLX1A-204ENST00000563995 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
SLX1A-204ENST00000563995 SMIM13P0DJ93 91 aa12.11□□□□□ -0.47
SLX1A-204ENST00000563995 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
SLX1A-204ENST00000563995 IGKV2D-26A0A0A0MRZ7 120 aa12.09□□□□□ -0.47
SLX1A-204ENST00000563995 C22orf24Q9Y442 160 aa12.09□□□□□ -0.47
SLX1A-204ENST00000563995 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
SLX1A-204ENST00000563995 TP73-AS1Q9UF72 201 aa12.08□□□□□ -0.48
SLX1A-204ENST00000563995 IGLV5-37A0A075B6J1 123 aa12.06□□□□□ -0.48
SLX1A-204ENST00000563995 HNRNPA3P51991 378 aaKnown RBP12.06□□□□□ -0.48
SLX1A-204ENST00000563995 ANKRD39Q53RE8 183 aa12.06□□□□□ -0.48
SLX1A-204ENST00000563995 MIR7-3HGQ8N6C7 128 aa12.06□□□□□ -0.48
SLX1A-204ENST00000563995 A0A0J9YXY3 114 aa12.05□□□□□ -0.48
SLX1A-204ENST00000563995 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
SLX1A-204ENST00000563995 UBE2BP63146 152 aa12.04□□□□□ -0.48
SLX1A-204ENST00000563995 MRPL55Q7Z7F7 128 aaKnown RBP12.04□□□□□ -0.48
SLX1A-204ENST00000563995 KRTAP11-1Q8IUC1 163 aa12.04□□□□□ -0.48
SLX1A-204ENST00000563995 PSORS1C2Q9UIG4 136 aa12.04□□□□□ -0.48
SLX1A-204ENST00000563995 ZNF815PA8K554 130 aa12.03□□□□□ -0.48
SLX1A-204ENST00000563995 VPREB1P12018 145 aa12.03□□□□□ -0.48
SLX1A-204ENST00000563995 RPL24P83731 157 aaKnown RBP12.03□□□□□ -0.48
SLX1A-204ENST00000563995 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
SLX1A-204ENST00000563995 TTTY13Q9BZ97 58 aa12.03□□□□□ -0.48
SLX1A-204ENST00000563995 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
SLX1A-204ENST00000563995 LRP2P98164 4655 aa12.01□□□□□ -0.49
SLX1A-204ENST00000563995 SCGB1D1O95968 90 aa12.01□□□□□ -0.49
SLX1A-204ENST00000563995 DAND5Q8N907 189 aa12.01□□□□□ -0.49
SLX1A-204ENST00000563995 Q8NDZ9 215 aa12.01□□□□□ -0.49
SLX1A-204ENST00000563995 MT1HL1P0DM35 61 aa12□□□□□ -0.49
SLX1A-204ENST00000563995 LINC00167Q96N53 147 aa12□□□□□ -0.49
SLX1A-204ENST00000563995 C1orf137Q5JT78 98 aa11.99□□□□□ -0.49
SLX1A-204ENST00000563995 KRTAP9-2Q9BYQ4 174 aa11.99□□□□□ -0.49
SLX1A-204ENST00000563995 LOC107984156A0A0G2JMH3 177 aa11.98□□□□□ -0.49
SLX1A-204ENST00000563995 HSBP1L1C9JCN9 74 aa11.98□□□□□ -0.49
SLX1A-204ENST00000563995 TIMM17BO60830 172 aa11.98□□□□□ -0.49
SLX1A-204ENST00000563995 ARL17AQ8IVW1 177 aa11.98□□□□□ -0.49
SLX1A-204ENST00000563995 BOD1L2Q8IYS8 172 aa11.98□□□□□ -0.49
SLX1A-204ENST00000563995 GAGE10A6NGK3 116 aa11.97□□□□□ -0.49
SLX1A-204ENST00000563995 ADAMTSL4-AS1Q5T5F5 129 aa11.97□□□□□ -0.49
SLX1A-204ENST00000563995 LITAFQ99732 161 aa11.97□□□□□ -0.49
SLX1A-204ENST00000563995 PCP2Q8IVA1 136 aa11.96□□□□□ -0.49
SLX1A-204ENST00000563995 RPL37AP8A6NKH3 93 aa11.95□□□□□ -0.5
SLX1A-204ENST00000563995 SCGB1D4Q6XE38 83 aa11.94□□□□□ -0.5
SLX1A-204ENST00000563995 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
SLX1A-204ENST00000563995 IGLV7-43P04211 117 aa11.93□□□□□ -0.5
SLX1A-204ENST00000563995 KRTAP9-6A0A140TA67 174 aa11.92□□□□□ -0.5
SLX1A-204ENST00000563995 M0R378 163 aa11.92□□□□□ -0.5
SLX1A-204ENST00000563995 NPC2P61916 151 aa11.92□□□□□ -0.5
SLX1A-204ENST00000563995 SRSF9Q13242 221 aaKnown RBP eCLIP11.92□□□□□ -0.5
SLX1A-204ENST00000563995 JOSD1Q15040 202 aaPredicted RBP11.92□□□□□ -0.5
SLX1A-204ENST00000563995 SOSTDC1Q6X4U4 206 aa11.92□□□□□ -0.5
SLX1A-204ENST00000563995 IGLV1-50A0A075B6I6 118 aa11.91□□□□□ -0.5
SLX1A-204ENST00000563995 IGKV2-28A0A075B6P5 120 aa11.91□□□□□ -0.5
SLX1A-204ENST00000563995 NCR3O14931 201 aa11.91□□□□□ -0.5
SLX1A-204ENST00000563995 IGKV2D-28P01615 120 aa11.91□□□□□ -0.5
SLX1A-204ENST00000563995 SPINK6Q6UWN8 80 aa11.91□□□□□ -0.5
SLX1A-204ENST00000563995 TMEM238C9JI98 176 aa11.9□□□□□ -0.5
SLX1A-204ENST00000563995 EIF4EBP3O60516 100 aaPredicted RBP11.9□□□□□ -0.5
SLX1A-204ENST00000563995 NDUFC2O95298 119 aa11.89□□□□□ -0.51
SLX1A-204ENST00000563995 LINC00308Q8TCZ7 52 aa11.89□□□□□ -0.51
SLX1A-204ENST00000563995 TNXBP22105 4242 aa11.89□□□□□ -0.51
SLX1A-204ENST00000563995 BCE1O60756 84 aa11.88□□□□□ -0.51
SLX1A-204ENST00000563995 SPANXDQ9BXN6 97 aa11.88□□□□□ -0.51
SLX1A-204ENST00000563995 SPANXCQ9NY87 97 aa11.88□□□□□ -0.51
SLX1A-204ENST00000563995 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
SLX1A-204ENST00000563995 SPANXB1Q9NS25 103 aaPredicted RBP11.87□□□□□ -0.51
SLX1A-204ENST00000563995 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
SLX1A-204ENST00000563995 Q6ZVH6 145 aa11.84□□□□□ -0.51
SLX1A-204ENST00000563995 TMEM126AQ9H061 195 aa11.84□□□□□ -0.51
SLX1A-204ENST00000563995 TRBV10-3A0A0K0K1G6 114 aa11.83□□□□□ -0.52
SLX1A-204ENST00000563995 ZNF861PO60384 105 aa11.83□□□□□ -0.52
SLX1A-204ENST00000563995 COX8AP10176 69 aa11.83□□□□□ -0.52
SLX1A-204ENST00000563995 PYY3Q5JQD4 70 aa11.83□□□□□ -0.52
SLX1A-204ENST00000563995 VAMP8Q9BV40 100 aa11.83□□□□□ -0.52
SLX1A-204ENST00000563995 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
SLX1A-204ENST00000563995 IFITM1P13164 125 aa11.82□□□□□ -0.52
SLX1A-204ENST00000563995 SPATA45Q537H7 98 aa11.82□□□□□ -0.52
SLX1A-204ENST00000563995 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
SLX1A-204ENST00000563995 DIRC1Q969H9 104 aa11.82□□□□□ -0.52
SLX1A-204ENST00000563995 PRYO14603 147 aa11.81□□□□□ -0.52
SLX1A-204ENST00000563995 DDTP30046 118 aa11.81□□□□□ -0.52
SLX1A-204ENST00000563995 PPDPFQ9H3Y8 114 aa11.81□□□□□ -0.52
SLX1A-204ENST00000563995 KCNQ1DNQ9H478 68 aa11.81□□□□□ -0.52
SLX1A-204ENST00000563995 H0Y9J4 135 aa11.8□□□□□ -0.52
SLX1A-204ENST00000563995 RPL28P46779 137 aaKnown RBP11.8□□□□□ -0.52
SLX1A-204ENST00000563995 DLEU1O43261 78 aa11.79□□□□□ -0.52
SLX1A-204ENST00000563995 UBE2AP49459 152 aa11.79□□□□□ -0.52
SLX1A-204ENST00000563995 KRTAP13-1Q8IUC0 172 aa11.79□□□□□ -0.52
SLX1A-204ENST00000563995 IGLV6-57P01721 117 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms