RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
CNOT1-205ENST00000563283 IGKCP01834 107 aa3.3□□□□□ -1.88
CNOT1-205ENST00000563283 XGP55808 180 aa3.3□□□□□ -1.88
CNOT1-205ENST00000563283 ATOH7Q8N100 152 aa3.3□□□□□ -1.88
CNOT1-205ENST00000563283 Q8N814 137 aa3.3□□□□□ -1.88
CNOT1-205ENST00000563283 A0A087X002 238 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 TMEM223A0PJW6 202 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 KRTAP16-1A8MUX0 517 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 SCGB1D1O95968 90 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 AKR1D1P51857 326 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 CKS1BP61024 79 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 HERVK_113P61574 105 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 LINC01620Q4KN68 170 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 LINC01561Q8N1V8 128 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 COX7B2Q8TF08 81 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 CAMK2N2Q96S95 79 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 PKHD1L1Q86WI1 4243 aa3.29□□□□□ -1.88
CNOT1-205ENST00000563283 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 NDUFA1O15239 70 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 KIAA0087Q14695 138 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 C2orf82Q6UX34 121 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 Q8IZM0 81 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 C2orf48Q96LS8 159 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 CARD19Q96LW7 228 aa3.28□□□□□ -1.88
CNOT1-205ENST00000563283 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.27□□□□□ -1.89
CNOT1-205ENST00000563283 HSBP1L1C9JCN9 74 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 LEPROTO15243 131 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 CDK2AP2O75956 126 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 TSPEAR-AS2P59090 65 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 CNBPP62633 177 aaKnown RBP3.27□□□□□ -1.89
CNOT1-205ENST00000563283 HAMPP81172 84 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 UNQ6190/PRO20217Q6UXQ8 127 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 Q6ZRU5 148 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 PLEKHB2Q96CS7 222 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 MYCBP2O75592 4640 aa3.27□□□□□ -1.89
CNOT1-205ENST00000563283 E9PLD3 99 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 J3QQQ9 107 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 LGALS3P17931 250 aaKnown RBP3.26□□□□□ -1.89
CNOT1-205ENST00000563283 CXCL5P42830 114 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 NMUP48645 174 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 JOSD1Q15040 202 aaPredicted RBP3.26□□□□□ -1.89
CNOT1-205ENST00000563283 MAJINQ3KP22 176 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 C9orf116Q5BN46 136 aaPredicted RBP3.26□□□□□ -1.89
CNOT1-205ENST00000563283 Q6ZSA8 131 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 ZNF625Q96I27 306 aaPredicted RBP3.26□□□□□ -1.89
CNOT1-205ENST00000563283 C6orf48Q9UBA6 75 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 NDUFA12Q9UI09 145 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 HERC1Q15751 4861 aa3.26□□□□□ -1.89
CNOT1-205ENST00000563283 IGKV2D-26A0A0A0MRZ7 120 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 TRBV30A0A0K0K1B3 111 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 F8WDY8 70 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 PANO1I0J062 215 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
CNOT1-205ENST00000563283 PYY3Q5JQD4 70 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 C9orf163Q8N9P6 203 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 VAMP8Q9BV40 100 aa3.25□□□□□ -1.89
CNOT1-205ENST00000563283 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 A0A0U1RRA0 63 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 LOC107984640A0A0U1RRK4 108 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 MYMXA0A1B0GTQ4 84 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 ZNF815PA8K554 130 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 PFN2P35080 140 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 GAGE2BQ13066 116 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 GAGE2EQ4V326 116 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 MEIG1Q5JSS6 88 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 SFTA2Q6UW10 78 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 SDIM1Q6ZPB5 146 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 PCP2Q8IVA1 136 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 TTTY13Q9BZ97 58 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 GAGE2DQ9UEU5 116 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 PKIGQ9Y2B9 76 aa3.24□□□□□ -1.89
CNOT1-205ENST00000563283 A0A096LNI7 61 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 SMR3BP02814 79 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-205ENST00000563283 CHTF8P0CG12 524 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 SMIM13P0DJ93 91 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 LINC00158P58513 81 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 KRTAP10-4P60372 401 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-205ENST00000563283 HERV-K104P63124 156 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 SPATA45Q537H7 98 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 DPH3Q96FX2 82 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 ERG28Q9UKR5 140 aa3.23□□□□□ -1.89
CNOT1-205ENST00000563283 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
CNOT1-205ENST00000563283 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 A0A0J9YXY3 114 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 SMIM6P0DI80 62 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 ADAMTSL4-AS1Q5T5F5 129 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 SCGB1D4Q6XE38 83 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 Q6ZRP5 223 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 DAND5Q8N907 189 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 C14orf144Q96I85 54 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 XAGE1AQ9HD64 81 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 TP73-AS1Q9UF72 201 aa3.22□□□□□ -1.89
CNOT1-205ENST00000563283 LINC00587B1AMM8 73 aa3.21□□□□□ -1.9
CNOT1-205ENST00000563283 TLX1NBP0CAT3 122 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms