RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 C3orf56Q8N813 242 aa8.83□□□□□ -1
USB1-207ENST00000563149 USP17L23D6RBM5 183 aa8.82□□□□□ -1
USB1-207ENST00000563149 WIPF1O43516 503 aa8.82□□□□□ -1
USB1-207ENST00000563149 GHRHP01286 108 aa8.82□□□□□ -1
USB1-207ENST00000563149 HTN3P15516 51 aa8.81□□□□□ -1
USB1-207ENST00000563149 PDE6GP18545 87 aa8.81□□□□□ -1
USB1-207ENST00000563149 Q6ZQT0 140 aa8.81□□□□□ -1
USB1-207ENST00000563149 WFDC9Q8NEX5 89 aa8.81□□□□□ -1
USB1-207ENST00000563149 A0A087WVE0 104 aa8.81□□□□□ -1
USB1-207ENST00000563149 H3BNG1 76 aa8.81□□□□□ -1
USB1-207ENST00000563149 CCDC168Q8NDH2 2452 aa8.8□□□□□ -1
USB1-207ENST00000563149 TRBV7-6A0A0J9YX20 115 aa8.79□□□□□ -1
USB1-207ENST00000563149 DIRC1Q969H9 104 aa8.79□□□□□ -1
USB1-207ENST00000563149 C6orf48Q9UBA6 75 aa8.79□□□□□ -1
USB1-207ENST00000563149 LAMTOR3Q9UHA4 124 aa8.79□□□□□ -1
USB1-207ENST00000563149 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
USB1-207ENST00000563149 INAFM1C9JVW0 142 aa8.78□□□□□ -1
USB1-207ENST00000563149 BCE1O60756 84 aa8.78□□□□□ -1
USB1-207ENST00000563149 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.78□□□□□ -1
USB1-207ENST00000563149 UPK3BQ9BT76 320 aa8.78□□□□□ -1
USB1-207ENST00000563149 DSCR8Q96T75 97 aa8.77□□□□□ -1.01
USB1-207ENST00000563149 KMT2BQ9UMN6 2715 aaPredicted RBP8.76□□□□□ -1.01
USB1-207ENST00000563149 EGFEM1PQ0D2K5 195 aa8.76□□□□□ -1.01
USB1-207ENST00000563149 Q6ZQY7 126 aa8.76□□□□□ -1.01
USB1-207ENST00000563149 F8WDY8 70 aa8.75□□□□□ -1.01
USB1-207ENST00000563149 COX7BP24311 80 aa8.75□□□□□ -1.01
USB1-207ENST00000563149 TMEM258P61165 79 aa8.75□□□□□ -1.01
USB1-207ENST00000563149 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
USB1-207ENST00000563149 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
USB1-207ENST00000563149 ELOF1P60002 83 aaKnown RBP8.74□□□□□ -1.01
USB1-207ENST00000563149 HIVEP2P31629 2446 aa8.74□□□□□ -1.01
USB1-207ENST00000563149 NIPBLQ6KC79 2804 aaeCLIP8.74□□□□□ -1.01
USB1-207ENST00000563149 ACANP16112 2415 aa8.74□□□□□ -1.01
USB1-207ENST00000563149 M0R378 163 aa8.73□□□□□ -1.01
USB1-207ENST00000563149 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
USB1-207ENST00000563149 CAMK2N2Q96S95 79 aa8.73□□□□□ -1.01
USB1-207ENST00000563149 J3KT08 172 aa8.73□□□□□ -1.01
USB1-207ENST00000563149 VPREB1P12018 145 aa8.73□□□□□ -1.01
USB1-207ENST00000563149 FAM19A1Q7Z5A9 133 aa8.73□□□□□ -1.01
USB1-207ENST00000563149 KPRPQ5T749 579 aaPredicted RBP8.72□□□□□ -1.01
USB1-207ENST00000563149 XAGE1AQ9HD64 81 aa8.72□□□□□ -1.01
USB1-207ENST00000563149 FN1P02751 2386 aaKnown RBP8.72□□□□□ -1.01
USB1-207ENST00000563149 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.02
USB1-207ENST00000563149 CXCL6P80162 114 aa8.71□□□□□ -1.02
USB1-207ENST00000563149 Q6ZVQ6 151 aa8.71□□□□□ -1.02
USB1-207ENST00000563149 WFDC10BQ8IUB3 73 aa8.71□□□□□ -1.02
USB1-207ENST00000563149 SETD2Q9BYW2 2564 aaPredicted RBP8.7□□□□□ -1.02
USB1-207ENST00000563149 TENM4Q6N022 2769 aa8.7□□□□□ -1.02
USB1-207ENST00000563149 NDUFC2-KCTD14E9PQ53 114 aa8.7□□□□□ -1.02
USB1-207ENST00000563149 LINC01547P58512 204 aaPredicted RBP8.69□□□□□ -1.02
USB1-207ENST00000563149 HIGD2BQ4VC39 106 aa8.69□□□□□ -1.02
USB1-207ENST00000563149 MTORP42345 2549 aa8.69□□□□□ -1.02
USB1-207ENST00000563149 Q6ZRU5 148 aa8.68□□□□□ -1.02
USB1-207ENST00000563149 M0R2N4 97 aa8.68□□□□□ -1.02
USB1-207ENST00000563149 C15orf56Q8N910 161 aa8.68□□□□□ -1.02
USB1-207ENST00000563149 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
USB1-207ENST00000563149 HAMPP81172 84 aa8.66□□□□□ -1.02
USB1-207ENST00000563149 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
USB1-207ENST00000563149 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
USB1-207ENST00000563149 LINC01556Q5JQF7 62 aa8.66□□□□□ -1.02
USB1-207ENST00000563149 C1orf43Q9BWL3 253 aa8.66□□□□□ -1.02
USB1-207ENST00000563149 LOC107984640A0A0U1RRK4 108 aa8.65□□□□□ -1.02
USB1-207ENST00000563149 Q6ZTC4 211 aa8.65□□□□□ -1.02
USB1-207ENST00000563149 DPH3Q96FX2 82 aa8.65□□□□□ -1.02
USB1-207ENST00000563149 ESRGQ1W209 222 aa8.64□□□□□ -1.03
USB1-207ENST00000563149 GCN1Q92616 2671 aaKnown RBP8.62□□□□□ -1.03
USB1-207ENST00000563149 SYCNQ0VAF6 134 aa8.62□□□□□ -1.03
USB1-207ENST00000563149 Q6ZRP5 223 aa8.61□□□□□ -1.03
USB1-207ENST00000563149 RETNQ9HD89 108 aa8.61□□□□□ -1.03
USB1-207ENST00000563149 ITPR2Q14571 2701 aa8.61□□□□□ -1.03
USB1-207ENST00000563149 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
USB1-207ENST00000563149 IGKV2D-24A0A075B6R9 120 aa8.6□□□□□ -1.03
USB1-207ENST00000563149 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
USB1-207ENST00000563149 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
USB1-207ENST00000563149 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
USB1-207ENST00000563149 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
USB1-207ENST00000563149 NBEAL2Q6ZNJ1 2754 aa8.6□□□□□ -1.03
USB1-207ENST00000563149 UNC79Q9P2D8 2635 aa8.6□□□□□ -1.03
USB1-207ENST00000563149 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.03
USB1-207ENST00000563149 C20orf197Q8N268 126 aa8.59□□□□□ -1.03
USB1-207ENST00000563149 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
USB1-207ENST00000563149 NKAPP1Q8N9T2 125 aa8.58□□□□□ -1.04
USB1-207ENST00000563149 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
USB1-207ENST00000563149 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
USB1-207ENST00000563149 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
USB1-207ENST00000563149 A0A1B0GW54 56 aa8.56□□□□□ -1.04
USB1-207ENST00000563149 C11orf45Q8TAV5 145 aa8.56□□□□□ -1.04
USB1-207ENST00000563149 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
USB1-207ENST00000563149 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
USB1-207ENST00000563149 C7orf33Q8WU49 177 aa8.54□□□□□ -1.04
USB1-207ENST00000563149 FASNP49327 2511 aaKnown RBP8.53□□□□□ -1.04
USB1-207ENST00000563149 FAM236DA0A1B0GTK5 79 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 FAM236CP0DP71 79 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 VWFP04275 2813 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 IGLV5-48A0A075B6I7 105 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 H7BZZ5 65 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 PRYO14603 147 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 NREPQ16612 68 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 SERTAD4-AS1Q5TG53 156 aa8.53□□□□□ -1.04
USB1-207ENST00000563149 NOTCH2Q04721 2471 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms