RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092		Q8NBF4	154 aa		4.59	□□□□□ -1.67
CKLF-208	ENST00000563092	SVIP	Q8NHG7	77 aa		4.59	□□□□□ -1.67
CKLF-208	ENST00000563092	PRELID3A	Q96N28	172 aa		4.59	□□□□□ -1.67
CKLF-208	ENST00000563092	LAMTOR2	Q9Y2Q5	125 aa		4.59	□□□□□ -1.67
CKLF-208	ENST00000563092		A0A1B0GVG6	124 aa		4.58	□□□□□ -1.68
CKLF-208	ENST00000563092		K7EMI3	77 aa		4.58	□□□□□ -1.68
CKLF-208	ENST00000563092	MRPL54	Q6P161	138 aa	Known RBP	4.58	□□□□□ -1.68
CKLF-208	ENST00000563092	CBLN2	Q8IUK8	224 aa		4.58	□□□□□ -1.68
CKLF-208	ENST00000563092		Q8N377	158 aa		4.58	□□□□□ -1.68
CKLF-208	ENST00000563092		Q8N8P6	123 aa		4.58	□□□□□ -1.68
CKLF-208	ENST00000563092	COX7B2	Q8TF08	81 aa		4.58	□□□□□ -1.68
CKLF-208	ENST00000563092	ORMDL2	Q53FV1	153 aa		4.57	□□□□□ -1.68
CKLF-208	ENST00000563092	ALKAL2	Q6UX46	152 aa		4.57	□□□□□ -1.68
CKLF-208	ENST00000563092	ATP5L2	Q7Z4Y8	100 aa		4.57	□□□□□ -1.68
CKLF-208	ENST00000563092	DAND5	Q8N907	189 aa		4.57	□□□□□ -1.68
CKLF-208	ENST00000563092		Q8NDZ9	215 aa		4.57	□□□□□ -1.68
CKLF-208	ENST00000563092	TIMM17A	Q99595	171 aa		4.57	□□□□□ -1.68
CKLF-208	ENST00000563092	GEMIN7	Q9H840	131 aa	Known RBP	4.57	□□□□□ -1.68
CKLF-208	ENST00000563092	TINCR	A0A1B0GVN0	87 aa		4.56	□□□□□ -1.68
CKLF-208	ENST00000563092		C9JQL5	133 aa		4.56	□□□□□ -1.68
CKLF-208	ENST00000563092	RAB5B	P61020	215 aa		4.56	□□□□□ -1.68
CKLF-208	ENST00000563092	LINC00483	Q53H64	154 aa		4.56	□□□□□ -1.68
CKLF-208	ENST00000563092	PAPPA-AS1	Q5QFB9	102 aa		4.56	□□□□□ -1.68
CKLF-208	ENST00000563092	MAP1LC3A	Q9H492	121 aa		4.56	□□□□□ -1.68
CKLF-208	ENST00000563092	NAT8	Q9UHE5	227 aa		4.56	□□□□□ -1.68
CKLF-208	ENST00000563092	LOC389332	A0A1B0GUA5	103 aa		4.55	□□□□□ -1.68
CKLF-208	ENST00000563092	ADIRF	Q15847	76 aa		4.55	□□□□□ -1.68
CKLF-208	ENST00000563092	FAM19A2	Q8N3H0	131 aa		4.55	□□□□□ -1.68
CKLF-208	ENST00000563092	TOMM6	Q96B49	74 aa		4.55	□□□□□ -1.68
CKLF-208	ENST00000563092	HIGD2A	Q9BW72	106 aa		4.55	□□□□□ -1.68
CKLF-208	ENST00000563092	SND1-IT1	Q9HBX3	110 aa		4.55	□□□□□ -1.68
CKLF-208	ENST00000563092	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.55	□□□□□ -1.68
CKLF-208	ENST00000563092	NDUFA12	Q9UI09	145 aa		4.54	□□□□□ -1.68
CKLF-208	ENST00000563092	FLG	P20930	4061 aa	Predicted RBP	4.53	□□□□□ -1.68
CKLF-208	ENST00000563092	IGLV5-39	A0A0G2JS06	123 aa		4.53	□□□□□ -1.68
CKLF-208	ENST00000563092	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.53	□□□□□ -1.68
CKLF-208	ENST00000563092	RPL24	P83731	157 aa	Known RBP	4.53	□□□□□ -1.68
CKLF-208	ENST00000563092	ERAS	Q7Z444	233 aa		4.53	□□□□□ -1.68
CKLF-208	ENST00000563092	NXT2	Q9NPJ8	142 aa	Known RBP	4.53	□□□□□ -1.68
CKLF-208	ENST00000563092	SLC25A20	O43772	301 aa		4.52	□□□□□ -1.69
CKLF-208	ENST00000563092	ATP5L	O75964	103 aa		4.52	□□□□□ -1.69
CKLF-208	ENST00000563092	SPINK8	P0C7L1	97 aa		4.52	□□□□□ -1.69
CKLF-208	ENST00000563092	G0S2	P27469	103 aa		4.52	□□□□□ -1.69
CKLF-208	ENST00000563092	SPRR1A	P35321	89 aa		4.52	□□□□□ -1.69
CKLF-208	ENST00000563092	COX17	Q14061	63 aa		4.52	□□□□□ -1.69
CKLF-208	ENST00000563092	ADCYAP1	P18509	176 aa		4.51	□□□□□ -1.69
CKLF-208	ENST00000563092	PFN2	P35080	140 aa		4.51	□□□□□ -1.69
CKLF-208	ENST00000563092	PCOTH	Q58A44	107 aa		4.51	□□□□□ -1.69
CKLF-208	ENST00000563092	SSBP3-AS1	Q7Z2R9	100 aa		4.51	□□□□□ -1.69
CKLF-208	ENST00000563092	CST9L	Q9H4G1	147 aa		4.51	□□□□□ -1.69
CKLF-208	ENST00000563092	ERG28	Q9UKR5	140 aa		4.51	□□□□□ -1.69
CKLF-208	ENST00000563092	IGLV8-61	A0A075B6I0	122 aa		4.5	□□□□□ -1.69
CKLF-208	ENST00000563092	SMCR5	Q8TEV8	140 aa		4.5	□□□□□ -1.69
CKLF-208	ENST00000563092	LINC01546	A6NGU7	62 aa		4.49	□□□□□ -1.69
CKLF-208	ENST00000563092	RAB14	P61106	215 aa		4.49	□□□□□ -1.69
CKLF-208	ENST00000563092	SCGB3A1	Q96QR1	104 aa		4.49	□□□□□ -1.69
CKLF-208	ENST00000563092	KCNQ1DN	Q9H478	68 aa		4.49	□□□□□ -1.69
CKLF-208	ENST00000563092	LINC01549	A6NIU2	74 aa		4.48	□□□□□ -1.69
CKLF-208	ENST00000563092	PRY	O14603	147 aa		4.48	□□□□□ -1.69
CKLF-208	ENST00000563092	MOBP	Q13875	183 aa		4.48	□□□□□ -1.69
CKLF-208	ENST00000563092		H3BRM9	83 aa		4.47	□□□□□ -1.69
CKLF-208	ENST00000563092	IGLC3	P0DOY3	106 aa		4.47	□□□□□ -1.69
CKLF-208	ENST00000563092	PMVK	Q15126	192 aa		4.47	□□□□□ -1.69
CKLF-208	ENST00000563092	ZNF625	Q96I27	306 aa	Predicted RBP	4.47	□□□□□ -1.69
CKLF-208	ENST00000563092	SSPO	A2VEC9	5147 aa		4.47	□□□□□ -1.69
CKLF-208	ENST00000563092		M0R2T5	61 aa		4.46	□□□□□ -1.7
CKLF-208	ENST00000563092	PEA15	Q15121	130 aa		4.46	□□□□□ -1.7
CKLF-208	ENST00000563092	SFTA2	Q6UW10	78 aa		4.46	□□□□□ -1.7
CKLF-208	ENST00000563092	AKAP14	Q86UN6	197 aa		4.46	□□□□□ -1.7
CKLF-208	ENST00000563092	ERC2-IT1	O76042	136 aa		4.45	□□□□□ -1.7
CKLF-208	ENST00000563092	ZNF22	P17026	224 aa	Predicted RBP	4.45	□□□□□ -1.7
CKLF-208	ENST00000563092	GAGE2A	Q6NT46	116 aa		4.45	□□□□□ -1.7
CKLF-208	ENST00000563092	IGLV9-49	A0A0B4J1Y8	123 aa		4.44	□□□□□ -1.7
CKLF-208	ENST00000563092		B5MCH6	92 aa		4.44	□□□□□ -1.7
CKLF-208	ENST00000563092	USH2A	O75445	5202 aa		4.44	□□□□□ -1.7
CKLF-208	ENST00000563092	KRTAP23-1	A1A580	65 aa		4.43	□□□□□ -1.7
CKLF-208	ENST00000563092		Q9BRP9	147 aa		4.43	□□□□□ -1.7
CKLF-208	ENST00000563092	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.42	□□□□□ -1.7
CKLF-208	ENST00000563092	ETDC	A0A1B0GVM5	59 aa		4.42	□□□□□ -1.7
CKLF-208	ENST00000563092	TRBV10-3	A0A0K0K1G6	114 aa		4.41	□□□□□ -1.7
CKLF-208	ENST00000563092	KIAA1644	Q3SXP7	199 aa		4.41	□□□□□ -1.7
CKLF-208	ENST00000563092	TRAV9-1	A0A075B6T8	112 aa		4.4	□□□□□ -1.71
CKLF-208	ENST00000563092		A0A096LNJ9	63 aa		4.4	□□□□□ -1.71
CKLF-208	ENST00000563092	C9orf92	A6NGG3	77 aa		4.4	□□□□□ -1.71
CKLF-208	ENST00000563092	MT-ND4L	P03901	98 aa		4.4	□□□□□ -1.71
CKLF-208	ENST00000563092	LINC00158	P58513	81 aa		4.4	□□□□□ -1.71
CKLF-208	ENST00000563092		Q6ZRX8	168 aa		4.4	□□□□□ -1.71
CKLF-208	ENST00000563092	BOD1L2	Q8IYS8	172 aa		4.4	□□□□□ -1.71
CKLF-208	ENST00000563092	C11orf86	A6NJI1	115 aa		4.39	□□□□□ -1.71
CKLF-208	ENST00000563092	NCR3	O14931	201 aa		4.39	□□□□□ -1.71
CKLF-208	ENST00000563092	LOC107984156	A0A0G2JMH3	177 aa		4.38	□□□□□ -1.71
CKLF-208	ENST00000563092	IGLV6-57	P01721	117 aa		4.38	□□□□□ -1.71
CKLF-208	ENST00000563092	CFC1	P0CG37	223 aa		4.38	□□□□□ -1.71
CKLF-208	ENST00000563092	RPL37	P61927	97 aa	Known RBP	4.38	□□□□□ -1.71
CKLF-208	ENST00000563092	COX6B2	Q6YFQ2	88 aa		4.38	□□□□□ -1.71
CKLF-208	ENST00000563092	FA2H	Q7L5A8	372 aa		4.38	□□□□□ -1.71
CKLF-208	ENST00000563092	ARL17A	Q8IVW1	177 aa		4.38	□□□□□ -1.71
CKLF-208	ENST00000563092	LIMD2	Q9BT23	127 aa		4.38	□□□□□ -1.71
CKLF-208	ENST00000563092		A0A0U1RRA0	63 aa		4.37	□□□□□ -1.71
CKLF-208	ENST00000563092	C5orf52	A6NGY3	159 aa		4.37	□□□□□ -1.71

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