RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 PCP2Q8IVA1 136 aa8□□□□□ -1.13
CDH11-204ENST00000562712 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
CDH11-204ENST00000562712 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
CDH11-204ENST00000562712 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
CDH11-204ENST00000562712 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
CDH11-204ENST00000562712 VPS13BQ7Z7G8 4022 aa7.98□□□□□ -1.13
CDH11-204ENST00000562712 RPL24P83731 157 aaKnown RBP7.98□□□□□ -1.13
CDH11-204ENST00000562712 ADAMTSL4-AS1Q5T5F5 129 aa7.98□□□□□ -1.13
CDH11-204ENST00000562712 SERTAD4-AS1Q5TG53 156 aa7.98□□□□□ -1.13
CDH11-204ENST00000562712 C7orf33Q8WU49 177 aa7.98□□□□□ -1.13
CDH11-204ENST00000562712 LITAFQ99732 161 aa7.98□□□□□ -1.13
CDH11-204ENST00000562712 VAMP8Q9BV40 100 aa7.98□□□□□ -1.13
CDH11-204ENST00000562712 C22orf24Q9Y442 160 aa7.98□□□□□ -1.13
CDH11-204ENST00000562712 IGLV5-37A0A075B6J1 123 aa7.97□□□□□ -1.13
CDH11-204ENST00000562712 SCGB1D4Q6XE38 83 aa7.97□□□□□ -1.13
CDH11-204ENST00000562712 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
CDH11-204ENST00000562712 DAND5Q8N907 189 aa7.97□□□□□ -1.13
CDH11-204ENST00000562712 TP73-AS1Q9UF72 201 aa7.97□□□□□ -1.13
CDH11-204ENST00000562712 M0QXV9 152 aa7.96□□□□□ -1.14
CDH11-204ENST00000562712 SPATA45Q537H7 98 aa7.96□□□□□ -1.14
CDH11-204ENST00000562712 LBHQ53QV2 105 aaPredicted RBP7.96□□□□□ -1.14
CDH11-204ENST00000562712 PHF5AQ7RTV0 110 aaKnown RBP7.96□□□□□ -1.14
CDH11-204ENST00000562712 PAM16Q9Y3D7 125 aa7.96□□□□□ -1.14
CDH11-204ENST00000562712 COX8AP10176 69 aa7.95□□□□□ -1.14
CDH11-204ENST00000562712 VPREB1P12018 145 aa7.95□□□□□ -1.14
CDH11-204ENST00000562712 Q5VSD8 79 aa7.95□□□□□ -1.14
CDH11-204ENST00000562712 BOD1L2Q8IYS8 172 aa7.95□□□□□ -1.14
CDH11-204ENST00000562712 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
CDH11-204ENST00000562712 DLEU1O43261 78 aa7.94□□□□□ -1.14
CDH11-204ENST00000562712 PLA2G1BP04054 148 aaKnown RBP7.94□□□□□ -1.14
CDH11-204ENST00000562712 Q6ZVH6 145 aa7.94□□□□□ -1.14
CDH11-204ENST00000562712 MRPL55Q7Z7F7 128 aaKnown RBP7.94□□□□□ -1.14
CDH11-204ENST00000562712 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
CDH11-204ENST00000562712 MIEN1Q9BRT3 115 aa7.94□□□□□ -1.14
CDH11-204ENST00000562712 SPANXDQ9BXN6 97 aa7.94□□□□□ -1.14
CDH11-204ENST00000562712 SPANXCQ9NY87 97 aa7.94□□□□□ -1.14
CDH11-204ENST00000562712 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
CDH11-204ENST00000562712 Q8NDZ9 215 aa7.93□□□□□ -1.14
CDH11-204ENST00000562712 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
CDH11-204ENST00000562712 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
CDH11-204ENST00000562712 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
CDH11-204ENST00000562712 NDUFC2O95298 119 aa7.92□□□□□ -1.14
CDH11-204ENST00000562712 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
CDH11-204ENST00000562712 LINC00308Q8TCZ7 52 aa7.92□□□□□ -1.14
CDH11-204ENST00000562712 COPS9Q8WXC6 57 aa7.92□□□□□ -1.14
CDH11-204ENST00000562712 C14orf144Q96I85 54 aa7.92□□□□□ -1.14
CDH11-204ENST00000562712 LINC00167Q96N53 147 aa7.92□□□□□ -1.14
CDH11-204ENST00000562712 PPDPFQ9H3Y8 114 aa7.92□□□□□ -1.14
CDH11-204ENST00000562712 LOC105371267A0A1B0GV96 52 aa7.91□□□□□ -1.14
CDH11-204ENST00000562712 EIF4EBP3O60516 100 aaPredicted RBP7.91□□□□□ -1.14
CDH11-204ENST00000562712 IFITM1P13164 125 aa7.91□□□□□ -1.14
CDH11-204ENST00000562712 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
CDH11-204ENST00000562712 SOSTDC1Q6X4U4 206 aa7.91□□□□□ -1.14
CDH11-204ENST00000562712 M0R378 163 aa7.9□□□□□ -1.14
CDH11-204ENST00000562712 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
CDH11-204ENST00000562712 NPC2P61916 151 aa7.9□□□□□ -1.14
CDH11-204ENST00000562712 UBE2BP63146 152 aa7.9□□□□□ -1.14
CDH11-204ENST00000562712 S100A12P80511 92 aa7.9□□□□□ -1.14
CDH11-204ENST00000562712 SLC25A34Q6PIV7 304 aa7.9□□□□□ -1.14
CDH11-204ENST00000562712 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
CDH11-204ENST00000562712 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
CDH11-204ENST00000562712 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
CDH11-204ENST00000562712 TRBV10-2A0A0K0K1G8 114 aa7.89□□□□□ -1.15
CDH11-204ENST00000562712 RPL37AP8A6NKH3 93 aa7.89□□□□□ -1.15
CDH11-204ENST00000562712 KRTAP11-1Q8IUC1 163 aa7.89□□□□□ -1.15
CDH11-204ENST00000562712 HERC1Q15751 4861 aa7.89□□□□□ -1.15
CDH11-204ENST00000562712 GAGE10A6NGK3 116 aa7.88□□□□□ -1.15
CDH11-204ENST00000562712 INAFM2P0DMQ5 153 aa7.88□□□□□ -1.15
CDH11-204ENST00000562712 SRSF9Q13242 221 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDH11-204ENST00000562712 SMIM6P0DI80 62 aa7.87□□□□□ -1.15
CDH11-204ENST00000562712 MUSTN1Q8IVN3 82 aa7.87□□□□□ -1.15
CDH11-204ENST00000562712 HIGD1BQ9P298 99 aa7.87□□□□□ -1.15
CDH11-204ENST00000562712 NCR3O14931 201 aa7.86□□□□□ -1.15
CDH11-204ENST00000562712 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
CDH11-204ENST00000562712 IGKV2-28A0A075B6P5 120 aa7.85□□□□□ -1.15
CDH11-204ENST00000562712 IGKV2D-28P01615 120 aa7.85□□□□□ -1.15
CDH11-204ENST00000562712 LINC00518Q8N0U6 118 aa7.85□□□□□ -1.15
CDH11-204ENST00000562712 HIST1H4GQ99525 98 aa7.84□□□□□ -1.15
CDH11-204ENST00000562712 IGLV6-57P01721 117 aa7.83□□□□□ -1.16
CDH11-204ENST00000562712 DDTP30046 118 aa7.83□□□□□ -1.16
CDH11-204ENST00000562712 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
CDH11-204ENST00000562712 C2orf91Q6ZV80 131 aa7.83□□□□□ -1.16
CDH11-204ENST00000562712 KCNQ1DNQ9H478 68 aa7.83□□□□□ -1.16
CDH11-204ENST00000562712 TRBV10-3A0A0K0K1G6 114 aa7.82□□□□□ -1.16
CDH11-204ENST00000562712 BCE1O60756 84 aa7.82□□□□□ -1.16
CDH11-204ENST00000562712 IGLV7-43P04211 117 aa7.82□□□□□ -1.16
CDH11-204ENST00000562712 REG3GQ6UW15 175 aa7.82□□□□□ -1.16
CDH11-204ENST00000562712 UQCR10Q9UDW1 63 aa7.82□□□□□ -1.16
CDH11-204ENST00000562712 TAL2Q16559 108 aa7.81□□□□□ -1.16
CDH11-204ENST00000562712 TMEM126AQ9H061 195 aa7.81□□□□□ -1.16
CDH11-204ENST00000562712 PRYO14603 147 aa7.8□□□□□ -1.16
CDH11-204ENST00000562712 SPINK6Q6UWN8 80 aa7.8□□□□□ -1.16
CDH11-204ENST00000562712 CBY1Q9Y3M2 126 aa7.8□□□□□ -1.16
CDH11-204ENST00000562712 A4D1N5 150 aa7.79□□□□□ -1.16
CDH11-204ENST00000562712 SPRR1AP35321 89 aa7.79□□□□□ -1.16
CDH11-204ENST00000562712 HNRNPA3P51991 378 aaKnown RBP7.79□□□□□ -1.16
CDH11-204ENST00000562712 LINC00337Q8N6G1 96 aa7.79□□□□□ -1.16
CDH11-204ENST00000562712 OR13C6PQ8NH95 151 aa7.79□□□□□ -1.16
CDH11-204ENST00000562712 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
CDH11-204ENST00000562712 ZNF861PO60384 105 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms