RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 HERVK_113P61574 105 aa4.41□□□□□ -1.7
TUBGCP4-203ENST00000562053 COX17Q14061 63 aa4.41□□□□□ -1.7
TUBGCP4-203ENST00000562053 PET117Q6UWS5 81 aa4.41□□□□□ -1.7
TUBGCP4-203ENST00000562053 TP73-AS1Q9UF72 201 aa4.41□□□□□ -1.7
TUBGCP4-203ENST00000562053 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 J3QQQ9 107 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 LEPROTO15243 131 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 PFN2P35080 140 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 HERV-K104P63124 156 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 PLEKHB2Q96CS7 222 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 SND1-IT1Q9HBX3 110 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 NDUFA12Q9UI09 145 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 PSORS1C2Q9UIG4 136 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 HERC1Q15751 4861 aa4.4□□□□□ -1.71
TUBGCP4-203ENST00000562053 E9PLD3 99 aa4.39□□□□□ -1.71
TUBGCP4-203ENST00000562053 NMUP48645 174 aa4.39□□□□□ -1.71
TUBGCP4-203ENST00000562053 KRTDAPP60985 99 aa4.39□□□□□ -1.71
TUBGCP4-203ENST00000562053 MRPL55Q7Z7F7 128 aaKnown RBP4.39□□□□□ -1.71
TUBGCP4-203ENST00000562053 HIST3H2BBQ8N257 126 aa4.39□□□□□ -1.71
TUBGCP4-203ENST00000562053 MYMXA0A1B0GTQ4 84 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 C20orf202A1L168 122 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 VPREB1P12018 145 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 LGALS3P17931 250 aaKnown RBP4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 UBE2BP63146 152 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 Q8NDZ9 215 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 HIST1H2BLQ99880 126 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
TUBGCP4-203ENST00000562053 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 KRTAP29-1A8MX34 341 aaPredicted RBP4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 H3BS24 57 aa4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 SMIM13P0DJ93 91 aa4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 LINC00158P58513 81 aa4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 NKAPP1Q8N9T2 125 aa4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
TUBGCP4-203ENST00000562053 TNXBP22105 4242 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 IGKV2D-26A0A0A0MRZ7 120 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 A0A0U1RRA0 63 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 LINC00587B1AMM8 73 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 S100A2P29034 98 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 AKR1D1P51857 326 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 C1orf137Q5JT78 98 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 SPINK6Q6UWN8 80 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 MIR7-3HGQ8N6C7 128 aa4.36□□□□□ -1.71
TUBGCP4-203ENST00000562053 A0A0J9YXY3 114 aa4.35□□□□□ -1.71
TUBGCP4-203ENST00000562053 OXTP01178 125 aa4.35□□□□□ -1.71
TUBGCP4-203ENST00000562053 RPL24P83731 157 aaKnown RBP4.35□□□□□ -1.71
TUBGCP4-203ENST00000562053 SRSF9Q13242 221 aaKnown RBP eCLIP4.35□□□□□ -1.71
TUBGCP4-203ENST00000562053 LINC00167Q96N53 147 aa4.35□□□□□ -1.71
TUBGCP4-203ENST00000562053 LOC107984156A0A0G2JMH3 177 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 GAGE10A6NGK3 116 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 C5orf52A6NGY3 159 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 SNRPEP62304 92 aaKnown RBP4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 ARL17AQ8IVW1 177 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 BOD1L2Q8IYS8 172 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 ATOH7Q8N100 152 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 DAND5Q8N907 189 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 LITAFQ99732 161 aa4.34□□□□□ -1.71
TUBGCP4-203ENST00000562053 IGLV1-50A0A075B6I6 118 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 IGKV2-28A0A075B6P5 120 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 RPL37AP8A6NKH3 93 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 ZNF815PA8K554 130 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 H0Y9J4 135 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 BCE1O60756 84 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 TIMM17BO60830 172 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 IGKV2D-28P01615 120 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 XP32Q5T750 250 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 TTTY13Q9BZ97 58 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
TUBGCP4-203ENST00000562053 NCR3O14931 201 aa4.32□□□□□ -1.72
TUBGCP4-203ENST00000562053 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
TUBGCP4-203ENST00000562053 REG3GQ6UW15 175 aa4.32□□□□□ -1.72
TUBGCP4-203ENST00000562053 KRTAP13-1Q8IUC0 172 aa4.32□□□□□ -1.72
TUBGCP4-203ENST00000562053 DIRC1Q969H9 104 aa4.32□□□□□ -1.72
TUBGCP4-203ENST00000562053 MIEN1Q9BRT3 115 aa4.32□□□□□ -1.72
TUBGCP4-203ENST00000562053 LOC105371267A0A1B0GV96 52 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 HSBP1L1C9JCN9 74 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 M0R378 163 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 ZNF861PO60384 105 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 ADAMTSL4-AS1Q5T5F5 129 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 SOSTDC1Q6X4U4 206 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 LINC01600Q96MT4 127 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 TMEM126AQ9H061 195 aa4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 SPANXB1Q9NS25 103 aaPredicted RBP4.31□□□□□ -1.72
TUBGCP4-203ENST00000562053 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
TUBGCP4-203ENST00000562053 PRYO14603 147 aa4.3□□□□□ -1.72
TUBGCP4-203ENST00000562053 NDUFC2O95298 119 aa4.3□□□□□ -1.72
TUBGCP4-203ENST00000562053 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
TUBGCP4-203ENST00000562053 RPL28P46779 137 aaKnown RBP4.3□□□□□ -1.72
TUBGCP4-203ENST00000562053 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
TUBGCP4-203ENST00000562053 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
TUBGCP4-203ENST00000562053 SPRR1AP35321 89 aa4.29□□□□□ -1.72
TUBGCP4-203ENST00000562053 NPC2P61916 151 aa4.29□□□□□ -1.72
TUBGCP4-203ENST00000562053 PRLHP81277 87 aa4.29□□□□□ -1.72
TUBGCP4-203ENST00000562053 SCGB1D4Q6XE38 83 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms