RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 VPREB1P12018 145 aa5.65□□□□□ -1.5
NSMCE1-203ENST00000562039 RPL28P46779 137 aaKnown RBP5.65□□□□□ -1.5
NSMCE1-203ENST00000562039 PRLHP81277 87 aa5.65□□□□□ -1.5
NSMCE1-203ENST00000562039 IGLV1-50A0A075B6I6 118 aa5.64□□□□□ -1.51
NSMCE1-203ENST00000562039 TSPAN13O95857 204 aa5.64□□□□□ -1.51
NSMCE1-203ENST00000562039 MEIG1Q5JSS6 88 aa5.64□□□□□ -1.51
NSMCE1-203ENST00000562039 LPAP08519 4548 aa5.63□□□□□ -1.51
NSMCE1-203ENST00000562039 A0A087X002 238 aa5.63□□□□□ -1.51
NSMCE1-203ENST00000562039 COLCA2A8K830 154 aa5.63□□□□□ -1.51
NSMCE1-203ENST00000562039 NCR3O14931 201 aa5.63□□□□□ -1.51
NSMCE1-203ENST00000562039 LEPROTL1O95214 131 aa5.63□□□□□ -1.51
NSMCE1-203ENST00000562039 FAM19A1Q7Z5A9 133 aa5.63□□□□□ -1.51
NSMCE1-203ENST00000562039 ATP6V1G1O75348 118 aa5.62□□□□□ -1.51
NSMCE1-203ENST00000562039 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
NSMCE1-203ENST00000562039 RPL24P83731 157 aaKnown RBP5.62□□□□□ -1.51
NSMCE1-203ENST00000562039 M0R378 163 aa5.61□□□□□ -1.51
NSMCE1-203ENST00000562039 COX17Q14061 63 aa5.61□□□□□ -1.51
NSMCE1-203ENST00000562039 MIR7-3HGQ8N6C7 128 aa5.61□□□□□ -1.51
NSMCE1-203ENST00000562039 DAND5Q8N907 189 aa5.61□□□□□ -1.51
NSMCE1-203ENST00000562039 TMEM126AQ9H061 195 aa5.61□□□□□ -1.51
NSMCE1-203ENST00000562039 NDUFA12Q9UI09 145 aa5.61□□□□□ -1.51
NSMCE1-203ENST00000562039 RPL13AP40429 203 aaKnown RBP5.6□□□□□ -1.51
NSMCE1-203ENST00000562039 PRR4Q16378 134 aa5.6□□□□□ -1.51
NSMCE1-203ENST00000562039 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
NSMCE1-203ENST00000562039 BOD1L2Q8IYS8 172 aa5.6□□□□□ -1.51
NSMCE1-203ENST00000562039 TYMSOSQ8TAI1 123 aa5.6□□□□□ -1.51
NSMCE1-203ENST00000562039 HIGD2AQ9BW72 106 aa5.59□□□□□ -1.51
NSMCE1-203ENST00000562039 RNF213Q63HN8 5207 aa5.59□□□□□ -1.51
NSMCE1-203ENST00000562039 LEPROTO15243 131 aa5.58□□□□□ -1.52
NSMCE1-203ENST00000562039 DPM2O94777 84 aa5.58□□□□□ -1.52
NSMCE1-203ENST00000562039 CRYGAP11844 174 aa5.58□□□□□ -1.52
NSMCE1-203ENST00000562039 NPC2P61916 151 aa5.58□□□□□ -1.52
NSMCE1-203ENST00000562039 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
NSMCE1-203ENST00000562039 SFTA2Q6UW10 78 aa5.58□□□□□ -1.52
NSMCE1-203ENST00000562039 HSPB8Q9UJY1 196 aa5.58□□□□□ -1.52
NSMCE1-203ENST00000562039 MYMXA0A1B0GTQ4 84 aa5.57□□□□□ -1.52
NSMCE1-203ENST00000562039 IGKCP01834 107 aa5.57□□□□□ -1.52
NSMCE1-203ENST00000562039 J3QQQ9 107 aa5.56□□□□□ -1.52
NSMCE1-203ENST00000562039 LGALS3P17931 250 aaKnown RBP5.56□□□□□ -1.52
NSMCE1-203ENST00000562039 HERVK_113P61574 105 aa5.56□□□□□ -1.52
NSMCE1-203ENST00000562039 HERV-K104P63124 156 aa5.56□□□□□ -1.52
NSMCE1-203ENST00000562039 PLEKHB2Q96CS7 222 aa5.56□□□□□ -1.52
NSMCE1-203ENST00000562039 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
NSMCE1-203ENST00000562039 MAP1LC3CQ9BXW4 147 aa5.56□□□□□ -1.52
NSMCE1-203ENST00000562039 TRBV10-3A0A0K0K1G6 114 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BKO60814 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BJP06899 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BOP23527 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 PLNP26678 52 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BBP33778 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BDP58876 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BCP62807 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST2H2BEQ16778 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 C3orf22Q8N5N4 141 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BHQ93079 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BNQ99877 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 HIST1H2BMQ99879 126 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 PPDPFQ9H3Y8 114 aa5.55□□□□□ -1.52
NSMCE1-203ENST00000562039 IGKV2D-26A0A0A0MRZ7 120 aa5.54□□□□□ -1.52
NSMCE1-203ENST00000562039 ETDCA0A1B0GVM5 59 aa5.53□□□□□ -1.52
NSMCE1-203ENST00000562039 EIF4EBP3O60516 100 aaPredicted RBP5.53□□□□□ -1.52
NSMCE1-203ENST00000562039 SYS1-DBNDD2H3BUS1 97 aa5.52□□□□□ -1.53
NSMCE1-203ENST00000562039 PRYO14603 147 aa5.52□□□□□ -1.53
NSMCE1-203ENST00000562039 ADAMTSL4-AS1Q5T5F5 129 aa5.52□□□□□ -1.53
NSMCE1-203ENST00000562039 SOSTDC1Q6X4U4 206 aa5.52□□□□□ -1.53
NSMCE1-203ENST00000562039 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
NSMCE1-203ENST00000562039 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
NSMCE1-203ENST00000562039 A0A0J9YXY3 114 aa5.51□□□□□ -1.53
NSMCE1-203ENST00000562039 LINC00587B1AMM8 73 aa5.51□□□□□ -1.53
NSMCE1-203ENST00000562039 DDTP30046 118 aa5.51□□□□□ -1.53
NSMCE1-203ENST00000562039 FAM229BQ4G0N7 80 aa5.51□□□□□ -1.53
NSMCE1-203ENST00000562039 SPRR4Q96PI1 79 aa5.51□□□□□ -1.53
NSMCE1-203ENST00000562039 MIEN1Q9BRT3 115 aa5.51□□□□□ -1.53
NSMCE1-203ENST00000562039 TTTY13Q9BZ97 58 aa5.51□□□□□ -1.53
NSMCE1-203ENST00000562039 E9PLD3 99 aa5.5□□□□□ -1.53
NSMCE1-203ENST00000562039 KRTDAPP60985 99 aa5.5□□□□□ -1.53
NSMCE1-203ENST00000562039 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
NSMCE1-203ENST00000562039 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
NSMCE1-203ENST00000562039 C3orf79P0CE67 100 aa5.49□□□□□ -1.53
NSMCE1-203ENST00000562039 SPRR1AP35321 89 aa5.49□□□□□ -1.53
NSMCE1-203ENST00000562039 NMUP48645 174 aa5.49□□□□□ -1.53
NSMCE1-203ENST00000562039 S100A7L2Q5SY68 101 aa5.49□□□□□ -1.53
NSMCE1-203ENST00000562039 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
NSMCE1-203ENST00000562039 LINC00337Q8N6G1 96 aa5.49□□□□□ -1.53
NSMCE1-203ENST00000562039 B5MCH6 92 aa5.48□□□□□ -1.53
NSMCE1-203ENST00000562039 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
NSMCE1-203ENST00000562039 ATOH7Q8N100 152 aa5.48□□□□□ -1.53
NSMCE1-203ENST00000562039 ZNF815PA8K554 130 aa5.47□□□□□ -1.53
NSMCE1-203ENST00000562039 S100A12P80511 92 aa5.47□□□□□ -1.53
NSMCE1-203ENST00000562039 LINC01545Q5VT33 79 aa5.47□□□□□ -1.53
NSMCE1-203ENST00000562039 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
NSMCE1-203ENST00000562039 SPANXB1Q9NS25 103 aaPredicted RBP5.47□□□□□ -1.53
NSMCE1-203ENST00000562039 IGLV9-49A0A0B4J1Y8 123 aa5.46□□□□□ -1.54
NSMCE1-203ENST00000562039 LOC107984156A0A0G2JMH3 177 aa5.46□□□□□ -1.54
NSMCE1-203ENST00000562039 ARL17AQ8IVW1 177 aa5.46□□□□□ -1.54
NSMCE1-203ENST00000562039 OR13C6PQ8NH95 151 aa5.46□□□□□ -1.54
NSMCE1-203ENST00000562039 Q9BRP9 147 aa5.46□□□□□ -1.54
NSMCE1-203ENST00000562039 ZNF706Q9Y5V0 76 aaPredicted RBP5.46□□□□□ -1.54
NSMCE1-203ENST00000562039 TRAV23DV6A0A075B6W5 121 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms