RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
NSMCE1-202ENST00000561960 ATP5LO75964 103 aa6.55□□□□□ -1.36
NSMCE1-202ENST00000561960 S100PP25815 95 aa6.55□□□□□ -1.36
NSMCE1-202ENST00000561960 C4orf48Q5BLP8 95 aa6.55□□□□□ -1.36
NSMCE1-202ENST00000561960 SPRR4Q96PI1 79 aa6.55□□□□□ -1.36
NSMCE1-202ENST00000561960 SMCO4Q9NRQ5 59 aa6.55□□□□□ -1.36
NSMCE1-202ENST00000561960 LINC00587B1AMM8 73 aa6.54□□□□□ -1.36
NSMCE1-202ENST00000561960 CST9LQ9H4G1 147 aa6.54□□□□□ -1.36
NSMCE1-202ENST00000561960 NXT2Q9NPJ8 142 aaKnown RBP6.54□□□□□ -1.36
NSMCE1-202ENST00000561960 IGLV5-45A0A087WSX0 123 aa6.53□□□□□ -1.36
NSMCE1-202ENST00000561960 NDUFA6P56556 154 aa6.53□□□□□ -1.36
NSMCE1-202ENST00000561960 PAPPA-AS1Q5QFB9 102 aa6.53□□□□□ -1.36
NSMCE1-202ENST00000561960 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
NSMCE1-202ENST00000561960 ERASQ7Z444 233 aa6.53□□□□□ -1.36
NSMCE1-202ENST00000561960 ERG28Q9UKR5 140 aa6.53□□□□□ -1.36
NSMCE1-202ENST00000561960 NPSP0C0P6 89 aa6.52□□□□□ -1.37
NSMCE1-202ENST00000561960 FP248Q71RG6 208 aaPredicted RBP6.52□□□□□ -1.37
NSMCE1-202ENST00000561960 IGLV9-49A0A0B4J1Y8 123 aa6.51□□□□□ -1.37
NSMCE1-202ENST00000561960 C5orf52A6NGY3 159 aa6.51□□□□□ -1.37
NSMCE1-202ENST00000561960 MT-ND4LP03901 98 aa6.51□□□□□ -1.37
NSMCE1-202ENST00000561960 SEC61BP60468 96 aaKnown RBP6.51□□□□□ -1.37
NSMCE1-202ENST00000561960 SNRPEP62304 92 aaKnown RBP6.51□□□□□ -1.37
NSMCE1-202ENST00000561960 COLCA2A8K830 154 aa6.5□□□□□ -1.37
NSMCE1-202ENST00000561960 NCR3O14931 201 aa6.5□□□□□ -1.37
NSMCE1-202ENST00000561960 SPAG11AQ6PDA7 123 aa6.5□□□□□ -1.37
NSMCE1-202ENST00000561960 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
NSMCE1-202ENST00000561960 RPL24P83731 157 aaKnown RBP6.49□□□□□ -1.37
NSMCE1-202ENST00000561960 MOBPQ13875 183 aa6.49□□□□□ -1.37
NSMCE1-202ENST00000561960 PMVKQ15126 192 aa6.49□□□□□ -1.37
NSMCE1-202ENST00000561960 H3BRM9 83 aa6.48□□□□□ -1.37
NSMCE1-202ENST00000561960 K7EMI3 77 aa6.48□□□□□ -1.37
NSMCE1-202ENST00000561960 MT1HP80294 61 aa6.48□□□□□ -1.37
NSMCE1-202ENST00000561960 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
NSMCE1-202ENST00000561960 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
NSMCE1-202ENST00000561960 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 LINC00158P58513 81 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 RHEBQ15382 184 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 PMCHL1Q16048 86 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 XP32Q5T750 250 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 RPS10P5Q9NQ39 176 aa6.47□□□□□ -1.37
NSMCE1-202ENST00000561960 Q8N377 158 aa6.46□□□□□ -1.38
NSMCE1-202ENST00000561960 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
NSMCE1-202ENST00000561960 GNB1LQ9BYB4 327 aa6.46□□□□□ -1.38
NSMCE1-202ENST00000561960 ERC2-IT1O76042 136 aa6.45□□□□□ -1.38
NSMCE1-202ENST00000561960 IGLC3P0DOY3 106 aa6.45□□□□□ -1.38
NSMCE1-202ENST00000561960 G0S2P27469 103 aa6.45□□□□□ -1.38
NSMCE1-202ENST00000561960 S100A2P29034 98 aa6.45□□□□□ -1.38
NSMCE1-202ENST00000561960 MRPL18Q9H0U6 180 aaKnown RBP6.45□□□□□ -1.38
NSMCE1-202ENST00000561960 ZNF706Q9Y5V0 76 aaPredicted RBP6.45□□□□□ -1.38
NSMCE1-202ENST00000561960 SPINK1P00995 79 aa6.44□□□□□ -1.38
NSMCE1-202ENST00000561960 TMEM170BQ5T4T1 132 aa6.44□□□□□ -1.38
NSMCE1-202ENST00000561960 FA2HQ7L5A8 372 aa6.44□□□□□ -1.38
NSMCE1-202ENST00000561960 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
NSMCE1-202ENST00000561960 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
NSMCE1-202ENST00000561960 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
NSMCE1-202ENST00000561960 C11orf86A6NJI1 115 aa6.43□□□□□ -1.38
NSMCE1-202ENST00000561960 SMIM13P0DJ93 91 aa6.43□□□□□ -1.38
NSMCE1-202ENST00000561960 PCOTHQ58A44 107 aa6.43□□□□□ -1.38
NSMCE1-202ENST00000561960 NDUFA12Q9UI09 145 aa6.43□□□□□ -1.38
NSMCE1-202ENST00000561960 A0A096LNJ9 63 aa6.42□□□□□ -1.38
NSMCE1-202ENST00000561960 BOD1L2Q8IYS8 172 aa6.42□□□□□ -1.38
NSMCE1-202ENST00000561960 IGLV8-61A0A075B6I0 122 aa6.41□□□□□ -1.38
NSMCE1-202ENST00000561960 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
NSMCE1-202ENST00000561960 PRYO14603 147 aa6.41□□□□□ -1.38
NSMCE1-202ENST00000561960 COX17Q14061 63 aa6.41□□□□□ -1.38
NSMCE1-202ENST00000561960 LINC01546A6NGU7 62 aa6.4□□□□□ -1.38
NSMCE1-202ENST00000561960 C9orf153Q5TBE3 101 aa6.4□□□□□ -1.38
NSMCE1-202ENST00000561960 HRCT1Q6UXD1 115 aa6.4□□□□□ -1.38
NSMCE1-202ENST00000561960 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
NSMCE1-202ENST00000561960 TSTD3H0UI37 97 aa6.39□□□□□ -1.39
NSMCE1-202ENST00000561960 KRTAP10-6P60371 365 aaPredicted RBP6.39□□□□□ -1.39
NSMCE1-202ENST00000561960 LINC00483Q53H64 154 aa6.39□□□□□ -1.39
NSMCE1-202ENST00000561960 URB1-AS1Q96HZ7 61 aa6.39□□□□□ -1.39
NSMCE1-202ENST00000561960 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
NSMCE1-202ENST00000561960 MEIG1Q5JSS6 88 aa6.38□□□□□ -1.39
NSMCE1-202ENST00000561960 BAGE3Q86Y29 109 aa6.38□□□□□ -1.39
NSMCE1-202ENST00000561960 MIR7-3HGQ8N6C7 128 aa6.38□□□□□ -1.39
NSMCE1-202ENST00000561960 YPEL4Q96NS1 127 aa6.38□□□□□ -1.39
NSMCE1-202ENST00000561960 Q9BRP9 147 aa6.38□□□□□ -1.39
NSMCE1-202ENST00000561960 B5MCH6 92 aa6.37□□□□□ -1.39
NSMCE1-202ENST00000561960 M0R2T5 61 aa6.37□□□□□ -1.39
NSMCE1-202ENST00000561960 SLC25A20O43772 301 aa6.37□□□□□ -1.39
NSMCE1-202ENST00000561960 SPRR1AP35321 89 aa6.37□□□□□ -1.39
NSMCE1-202ENST00000561960 DDTP30046 118 aa6.36□□□□□ -1.39
NSMCE1-202ENST00000561960 PYY3Q5JQD4 70 aa6.36□□□□□ -1.39
NSMCE1-202ENST00000561960 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
NSMCE1-202ENST00000561960 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
NSMCE1-202ENST00000561960 C14orf144Q96I85 54 aa6.36□□□□□ -1.39
NSMCE1-202ENST00000561960 KCNQ1DNQ9H478 68 aa6.36□□□□□ -1.39
NSMCE1-202ENST00000561960 A0A1B0GV90 55 aa6.35□□□□□ -1.39
NSMCE1-202ENST00000561960 HIST3H2BBQ8N257 126 aa6.35□□□□□ -1.39
NSMCE1-202ENST00000561960 CHTOPQ9Y3Y2 248 aaKnown RBP6.34□□□□□ -1.39
NSMCE1-202ENST00000561960 TMEM223A0PJW6 202 aa6.33□□□□□ -1.4
NSMCE1-202ENST00000561960 LINC01549A6NIU2 74 aa6.33□□□□□ -1.4
NSMCE1-202ENST00000561960 HBDP02042 147 aa6.33□□□□□ -1.4
NSMCE1-202ENST00000561960 CFC1BP0CG36 223 aa6.33□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BKO60814 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BJP06899 126 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 249 ms