RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 MRPL55Q7Z7F7 128 aaKnown RBP14.4□□□□□ -0.1
SMPD3-202ENST00000561749 GAGE10A6NGK3 116 aa14.39□□□□□ -0.11
SMPD3-202ENST00000561749 S100A6P06703 90 aa14.39□□□□□ -0.11
SMPD3-202ENST00000561749 LBHQ53QV2 105 aaPredicted RBP14.39□□□□□ -0.11
SMPD3-202ENST00000561749 E9PLD3 99 aa14.38□□□□□ -0.11
SMPD3-202ENST00000561749 S100A2P29034 98 aa14.38□□□□□ -0.11
SMPD3-202ENST00000561749 NKAPP1Q8N9T2 125 aa14.38□□□□□ -0.11
SMPD3-202ENST00000561749 TP73-AS1Q9UF72 201 aa14.38□□□□□ -0.11
SMPD3-202ENST00000561749 LINC00167Q96N53 147 aa14.37□□□□□ -0.11
SMPD3-202ENST00000561749 IGLV5-37A0A075B6J1 123 aa14.36□□□□□ -0.11
SMPD3-202ENST00000561749 C20orf202A1L168 122 aa14.36□□□□□ -0.11
SMPD3-202ENST00000561749 RPL37AP8A6NKH3 93 aa14.36□□□□□ -0.11
SMPD3-202ENST00000561749 MIR7-3HGQ8N6C7 128 aa14.36□□□□□ -0.11
SMPD3-202ENST00000561749 Q8NDZ9 215 aa14.36□□□□□ -0.11
SMPD3-202ENST00000561749 HIST1H2BLQ99880 126 aa14.36□□□□□ -0.11
SMPD3-202ENST00000561749 VPREB1P12018 145 aa14.35□□□□□ -0.11
SMPD3-202ENST00000561749 NMUP48645 174 aa14.35□□□□□ -0.11
SMPD3-202ENST00000561749 MYCBP2O75592 4640 aa14.35□□□□□ -0.11
SMPD3-202ENST00000561749 KRTAP29-1A8MX34 341 aaPredicted RBP14.34□□□□□ -0.11
SMPD3-202ENST00000561749 SRSF9Q13242 221 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMPD3-202ENST00000561749 ATOH7Q8N100 152 aa14.34□□□□□ -0.11
SMPD3-202ENST00000561749 J3QL48 77 aa14.33□□□□□ -0.12
SMPD3-202ENST00000561749 IGLV7-43P04211 117 aa14.33□□□□□ -0.12
SMPD3-202ENST00000561749 SNRPEP62304 92 aaKnown RBP14.33□□□□□ -0.12
SMPD3-202ENST00000561749 SPINK6Q6UWN8 80 aa14.33□□□□□ -0.12
SMPD3-202ENST00000561749 DAND5Q8N907 189 aa14.33□□□□□ -0.12
SMPD3-202ENST00000561749 IGKV2D-26A0A0A0MRZ7 120 aa14.32□□□□□ -0.12
SMPD3-202ENST00000561749 LINC00587B1AMM8 73 aa14.32□□□□□ -0.12
SMPD3-202ENST00000561749 RPL24P83731 157 aaKnown RBP14.32□□□□□ -0.12
SMPD3-202ENST00000561749 OXTP01178 125 aa14.29□□□□□ -0.12
SMPD3-202ENST00000561749 TTTY13Q9BZ97 58 aa14.29□□□□□ -0.12
SMPD3-202ENST00000561749 IGKV2-28A0A075B6P5 120 aa14.28□□□□□ -0.12
SMPD3-202ENST00000561749 A0A0J9YXY3 114 aa14.28□□□□□ -0.12
SMPD3-202ENST00000561749 IGKV2D-28P01615 120 aa14.28□□□□□ -0.12
SMPD3-202ENST00000561749 BOD1L2Q8IYS8 172 aa14.28□□□□□ -0.12
SMPD3-202ENST00000561749 LRP1Q07954 4544 aaKnown RBP14.27□□□□□ -0.13
SMPD3-202ENST00000561749 ANKRD39Q53RE8 183 aa14.26□□□□□ -0.13
SMPD3-202ENST00000561749 ZNF815PA8K554 130 aa14.25□□□□□ -0.13
SMPD3-202ENST00000561749 FAT3Q8TDW7 4589 aa14.24□□□□□ -0.13
SMPD3-202ENST00000561749 C5orf52A6NGY3 159 aa14.24□□□□□ -0.13
SMPD3-202ENST00000561749 NCR3O14931 201 aa14.24□□□□□ -0.13
SMPD3-202ENST00000561749 ADAMTSL4-AS1Q5T5F5 129 aa14.23□□□□□ -0.13
SMPD3-202ENST00000561749 DMBT1Q9UGM3 2413 aaPredicted RBP14.23□□□□□ -0.13
SMPD3-202ENST00000561749 IGLV1-50A0A075B6I6 118 aa14.22□□□□□ -0.13
SMPD3-202ENST00000561749 NPC2P61916 151 aa14.22□□□□□ -0.13
SMPD3-202ENST00000561749 REG3GQ6UW15 175 aa14.22□□□□□ -0.13
SMPD3-202ENST00000561749 BCE1O60756 84 aa14.21□□□□□ -0.13
SMPD3-202ENST00000561749 DIRC1Q969H9 104 aa14.21□□□□□ -0.13
SMPD3-202ENST00000561749 M0R378 163 aa14.2□□□□□ -0.14
SMPD3-202ENST00000561749 AKR1D1P51857 326 aa14.2□□□□□ -0.14
SMPD3-202ENST00000561749 TMEM238C9JI98 176 aa14.19□□□□□ -0.14
SMPD3-202ENST00000561749 MIEN1Q9BRT3 115 aa14.19□□□□□ -0.14
SMPD3-202ENST00000561749 H0Y9J4 135 aa14.18□□□□□ -0.14
SMPD3-202ENST00000561749 SOSTDC1Q6X4U4 206 aa14.18□□□□□ -0.14
SMPD3-202ENST00000561749 LOC107984156A0A0G2JMH3 177 aa14.17□□□□□ -0.14
SMPD3-202ENST00000561749 ZNF861PO60384 105 aa14.17□□□□□ -0.14
SMPD3-202ENST00000561749 EIF4EBP3O60516 100 aaPredicted RBP14.17□□□□□ -0.14
SMPD3-202ENST00000561749 MT1HL1P0DM35 61 aa14.17□□□□□ -0.14
SMPD3-202ENST00000561749 ARL17AQ8IVW1 177 aa14.17□□□□□ -0.14
SMPD3-202ENST00000561749 LITAFQ99732 161 aa14.17□□□□□ -0.14
SMPD3-202ENST00000561749 LINC01600Q96MT4 127 aa14.16□□□□□ -0.14
SMPD3-202ENST00000561749 PCP2Q8IVA1 136 aa14.15□□□□□ -0.14
SMPD3-202ENST00000561749 TMEM126AQ9H061 195 aa14.15□□□□□ -0.14
SMPD3-202ENST00000561749 TIMM17BO60830 172 aa14.14□□□□□ -0.15
SMPD3-202ENST00000561749 SCGB1D1O95968 90 aa14.14□□□□□ -0.15
SMPD3-202ENST00000561749 RPL28P46779 137 aaKnown RBP14.14□□□□□ -0.15
SMPD3-202ENST00000561749 UBE2AP49459 152 aa14.14□□□□□ -0.15
SMPD3-202ENST00000561749 SCGB1D4Q6XE38 83 aa14.12□□□□□ -0.15
SMPD3-202ENST00000561749 FAM19A1Q7Z5A9 133 aa14.12□□□□□ -0.15
SMPD3-202ENST00000561749 TRBV10-3A0A0K0K1G6 114 aa14.11□□□□□ -0.15
SMPD3-202ENST00000561749 PRLHP81277 87 aa14.11□□□□□ -0.15
SMPD3-202ENST00000561749 LINC00308Q8TCZ7 52 aa14.11□□□□□ -0.15
SMPD3-202ENST00000561749 HSBP1L1C9JCN9 74 aa14.1□□□□□ -0.15
SMPD3-202ENST00000561749 KRTAP13-1Q8IUC0 172 aa14.09□□□□□ -0.15
SMPD3-202ENST00000561749 SPANXB1Q9NS25 103 aaPredicted RBP14.09□□□□□ -0.15
SMPD3-202ENST00000561749 NDUFC2O95298 119 aa14.08□□□□□ -0.16
SMPD3-202ENST00000561749 TMA7Q9Y2S6 64 aaKnown RBP14.08□□□□□ -0.16
SMPD3-202ENST00000561749 TRBV10-2A0A0K0K1G8 114 aa14.07□□□□□ -0.16
SMPD3-202ENST00000561749 PRYO14603 147 aa14.07□□□□□ -0.16
SMPD3-202ENST00000561749 KRTAP1-4P0C5Y4 121 aa14.06□□□□□ -0.16
SMPD3-202ENST00000561749 DDTP30046 118 aa14.06□□□□□ -0.16
SMPD3-202ENST00000561749 PRR26Q8N8Z3 221 aa14.04□□□□□ -0.16
SMPD3-202ENST00000561749 KCNQ1DNQ9H478 68 aa14.04□□□□□ -0.16
SMPD3-202ENST00000561749 KRTAP10-8P60410 259 aa14.03□□□□□ -0.16
SMPD3-202ENST00000561749 S100A7L2Q5SY68 101 aa14.03□□□□□ -0.16
SMPD3-202ENST00000561749 SPANXDQ9BXN6 97 aa14.03□□□□□ -0.16
SMPD3-202ENST00000561749 SPANXCQ9NY87 97 aa14.03□□□□□ -0.16
SMPD3-202ENST00000561749 HERC1Q15751 4861 aa14.02□□□□□ -0.17
SMPD3-202ENST00000561749 SPRR1AP35321 89 aa14□□□□□ -0.17
SMPD3-202ENST00000561749 IGLV6-57P01721 117 aa13.99□□□□□ -0.17
SMPD3-202ENST00000561749 S100A12P80511 92 aa13.99□□□□□ -0.17
SMPD3-202ENST00000561749 HIGD2AQ9BW72 106 aa13.99□□□□□ -0.17
SMPD3-202ENST00000561749 ETDCA0A1B0GVM5 59 aa13.98□□□□□ -0.17
SMPD3-202ENST00000561749 LINC00337Q8N6G1 96 aa13.97□□□□□ -0.17
SMPD3-202ENST00000561749 OR13C6PQ8NH95 151 aa13.97□□□□□ -0.17
SMPD3-202ENST00000561749 KRTAP4-16G5E9R7 235 aaPredicted RBP13.96□□□□□ -0.17
SMPD3-202ENST00000561749 MUSTN1Q8IVN3 82 aa13.96□□□□□ -0.17
SMPD3-202ENST00000561749 ANAPC11Q9NYG5 84 aa13.96□□□□□ -0.17
SMPD3-202ENST00000561749 TRAV23DV6A0A075B6W5 121 aa13.94□□□□□ -0.18
SMPD3-202ENST00000561749 IFITM1P13164 125 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms