RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 LINC00474Q9P2X8 69 aa11.12□□□□□ -0.63
COMMD4-204ENST00000561662 PRSS2P07478 247 aa11.11□□□□□ -0.63
COMMD4-204ENST00000561662 C10orf25Q5T742 122 aa11.11□□□□□ -0.63
COMMD4-204ENST00000561662 PCP2Q8IVA1 136 aa11.11□□□□□ -0.63
COMMD4-204ENST00000561662 NDUFA1O15239 70 aa11.1□□□□□ -0.63
COMMD4-204ENST00000561662 CXCL5P42830 114 aa11.1□□□□□ -0.63
COMMD4-204ENST00000561662 NMUP48645 174 aa11.1□□□□□ -0.63
COMMD4-204ENST00000561662 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
COMMD4-204ENST00000561662 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
COMMD4-204ENST00000561662 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
COMMD4-204ENST00000561662 LGALS3P17931 250 aaKnown RBP11.09□□□□□ -0.63
COMMD4-204ENST00000561662 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-204ENST00000561662 LINC00518Q8N0U6 118 aa11.09□□□□□ -0.63
COMMD4-204ENST00000561662 COX8AP10176 69 aa11.08□□□□□ -0.64
COMMD4-204ENST00000561662 CKS1BP61024 79 aa11.08□□□□□ -0.64
COMMD4-204ENST00000561662 GAGE2BQ13066 116 aa11.08□□□□□ -0.64
COMMD4-204ENST00000561662 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
COMMD4-204ENST00000561662 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
COMMD4-204ENST00000561662 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
COMMD4-204ENST00000561662 S100A12P80511 92 aa11.07□□□□□ -0.64
COMMD4-204ENST00000561662 SYCNQ0VAF6 134 aa11.07□□□□□ -0.64
COMMD4-204ENST00000561662 SFTA2Q6UW10 78 aa11.07□□□□□ -0.64
COMMD4-204ENST00000561662 BOD1L2Q8IYS8 172 aa11.07□□□□□ -0.64
COMMD4-204ENST00000561662 C12orf57Q99622 126 aa11.07□□□□□ -0.64
COMMD4-204ENST00000561662 C6orf48Q9UBA6 75 aa11.07□□□□□ -0.64
COMMD4-204ENST00000561662 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
COMMD4-204ENST00000561662 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
COMMD4-204ENST00000561662 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
COMMD4-204ENST00000561662 TRBV30A0A0K0K1B3 111 aa11.05□□□□□ -0.64
COMMD4-204ENST00000561662 ZNF815PA8K554 130 aa11.05□□□□□ -0.64
COMMD4-204ENST00000561662 DLEU1O43261 78 aa11.05□□□□□ -0.64
COMMD4-204ENST00000561662 HERV-K104P63124 156 aa11.05□□□□□ -0.64
COMMD4-204ENST00000561662 C14orf144Q96I85 54 aa11.05□□□□□ -0.64
COMMD4-204ENST00000561662 A0A0J9YXY3 114 aa11.04□□□□□ -0.64
COMMD4-204ENST00000561662 PTTG1IPP53801 180 aa11.04□□□□□ -0.64
COMMD4-204ENST00000561662 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
COMMD4-204ENST00000561662 C9orf116Q5BN46 136 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-204ENST00000561662 PHF5AQ7RTV0 110 aaKnown RBP11.02□□□□□ -0.65
COMMD4-204ENST00000561662 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.65
COMMD4-204ENST00000561662 LITAFQ99732 161 aa11.01□□□□□ -0.65
COMMD4-204ENST00000561662 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
COMMD4-204ENST00000561662 TLX1NBP0CAT3 122 aa11□□□□□ -0.65
COMMD4-204ENST00000561662 TIMM17BO60830 172 aa10.99□□□□□ -0.65
COMMD4-204ENST00000561662 COX17Q14061 63 aa10.99□□□□□ -0.65
COMMD4-204ENST00000561662 SLC25A34Q6PIV7 304 aa10.99□□□□□ -0.65
COMMD4-204ENST00000561662 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
COMMD4-204ENST00000561662 ADAMTSL4-AS1Q5T5F5 129 aa10.98□□□□□ -0.65
COMMD4-204ENST00000561662 C2orf91Q6ZV80 131 aa10.98□□□□□ -0.65
COMMD4-204ENST00000561662 DIRC1Q969H9 104 aa10.98□□□□□ -0.65
COMMD4-204ENST00000561662 SMIM13P0DJ93 91 aa10.97□□□□□ -0.65
COMMD4-204ENST00000561662 PRO1933Q9H354 126 aa10.97□□□□□ -0.65
COMMD4-204ENST00000561662 LINC00587B1AMM8 73 aa10.96□□□□□ -0.65
COMMD4-204ENST00000561662 NDUFC2-KCTD14E9PQ53 114 aa10.96□□□□□ -0.65
COMMD4-204ENST00000561662 IGLV7-43P04211 117 aa10.96□□□□□ -0.65
COMMD4-204ENST00000561662 UQCR10Q9UDW1 63 aa10.96□□□□□ -0.65
COMMD4-204ENST00000561662 PFN2P35080 140 aa10.95□□□□□ -0.66
COMMD4-204ENST00000561662 RPL18AQ02543 176 aaKnown RBP10.95□□□□□ -0.66
COMMD4-204ENST00000561662 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
COMMD4-204ENST00000561662 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
COMMD4-204ENST00000561662 HIGD1BQ9P298 99 aa10.95□□□□□ -0.66
COMMD4-204ENST00000561662 H0Y9J4 135 aa10.94□□□□□ -0.66
COMMD4-204ENST00000561662 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
COMMD4-204ENST00000561662 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
COMMD4-204ENST00000561662 A0A0U1RRA0 63 aa10.93□□□□□ -0.66
COMMD4-204ENST00000561662 LINC00158P58513 81 aa10.93□□□□□ -0.66
COMMD4-204ENST00000561662 IGLV1-50A0A075B6I6 118 aa10.92□□□□□ -0.66
COMMD4-204ENST00000561662 KRTAP1-4P0C5Y4 121 aa10.92□□□□□ -0.66
COMMD4-204ENST00000561662 MIR7-3HGQ8N6C7 128 aa10.92□□□□□ -0.66
COMMD4-204ENST00000561662 SPANXDQ9BXN6 97 aa10.92□□□□□ -0.66
COMMD4-204ENST00000561662 SPANXB1Q9NS25 103 aaPredicted RBP10.92□□□□□ -0.66
COMMD4-204ENST00000561662 SPANXCQ9NY87 97 aa10.92□□□□□ -0.66
COMMD4-204ENST00000561662 LOC107984156A0A0G2JMH3 177 aa10.91□□□□□ -0.66
COMMD4-204ENST00000561662 TSPAN13O95857 204 aa10.91□□□□□ -0.66
COMMD4-204ENST00000561662 ARL17AQ8IVW1 177 aa10.91□□□□□ -0.66
COMMD4-204ENST00000561662 DAND5Q8N907 189 aa10.91□□□□□ -0.66
COMMD4-204ENST00000561662 SND1-IT1Q9HBX3 110 aa10.91□□□□□ -0.66
COMMD4-204ENST00000561662 TMEM238C9JI98 176 aa10.9□□□□□ -0.66
COMMD4-204ENST00000561662 EIF4EBP3O60516 100 aaPredicted RBP10.9□□□□□ -0.66
COMMD4-204ENST00000561662 C9orf129Q5T035 196 aaKnown RBP10.89□□□□□ -0.67
COMMD4-204ENST00000561662 SOSTDC1Q6X4U4 206 aa10.89□□□□□ -0.67
COMMD4-204ENST00000561662 FAM168BA1KXE4 195 aa10.88□□□□□ -0.67
COMMD4-204ENST00000561662 TSTD3H0UI37 97 aa10.88□□□□□ -0.67
COMMD4-204ENST00000561662 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
COMMD4-204ENST00000561662 Q6ZVH6 145 aa10.88□□□□□ -0.67
COMMD4-204ENST00000561662 PPDPFQ9H3Y8 114 aa10.88□□□□□ -0.67
COMMD4-204ENST00000561662 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
COMMD4-204ENST00000561662 LINC00308Q8TCZ7 52 aa10.87□□□□□ -0.67
COMMD4-204ENST00000561662 XAGE1AQ9HD64 81 aa10.87□□□□□ -0.67
COMMD4-204ENST00000561662 IFITM1P13164 125 aa10.85□□□□□ -0.67
COMMD4-204ENST00000561662 Q8NDZ9 215 aa10.85□□□□□ -0.67
COMMD4-204ENST00000561662 TAL2Q16559 108 aa10.84□□□□□ -0.67
COMMD4-204ENST00000561662 KRTAP7-1Q8IUC3 87 aa10.84□□□□□ -0.67
COMMD4-204ENST00000561662 MUSTN1Q8IVN3 82 aa10.84□□□□□ -0.67
COMMD4-204ENST00000561662 FAM19A5Q7Z5A7 132 aaPredicted RBP10.83□□□□□ -0.68
COMMD4-204ENST00000561662 RPL13AP40429 203 aaKnown RBP10.82□□□□□ -0.68
COMMD4-204ENST00000561662 NPC2P61916 151 aa10.82□□□□□ -0.68
COMMD4-204ENST00000561662 HIST1H4GQ99525 98 aa10.82□□□□□ -0.68
COMMD4-204ENST00000561662 HSD52Q0P140 79 aa10.81□□□□□ -0.68
COMMD4-204ENST00000561662 VPREB1P12018 145 aa10.8□□□□□ -0.68
COMMD4-204ENST00000561662 DDTP30046 118 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms