RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
GTF3C1-202ENST00000561623 PIEZO2Q9H5I5 2752 aa7.13□□□□□ -1.27
GTF3C1-202ENST00000561623 USP9XQ93008 2570 aaPredicted RBP7.13□□□□□ -1.27
GTF3C1-202ENST00000561623 KIAA0087Q14695 138 aa7.13□□□□□ -1.27
GTF3C1-202ENST00000561623 SMCR5Q8TEV8 140 aa7.13□□□□□ -1.27
GTF3C1-202ENST00000561623 C11orf72Q8NBR9 251 aa7.13□□□□□ -1.27
GTF3C1-202ENST00000561623 hDV103S1A0JD37 113 aa7.13□□□□□ -1.27
GTF3C1-202ENST00000561623 ADAMTS20P59510 1910 aa7.12□□□□□ -1.27
GTF3C1-202ENST00000561623 FHL3Q13643 280 aa7.12□□□□□ -1.27
GTF3C1-202ENST00000561623 POLQO75417 2590 aa7.12□□□□□ -1.27
GTF3C1-202ENST00000561623 SPAG11AQ6PDA7 123 aa7.12□□□□□ -1.27
GTF3C1-202ENST00000561623 IGLV8-61A0A075B6I0 122 aa7.11□□□□□ -1.27
GTF3C1-202ENST00000561623 IGHV3OR16-9A0A0B4J2B5 98 aa7.11□□□□□ -1.27
GTF3C1-202ENST00000561623 FAM19A4Q96LR4 140 aa7.11□□□□□ -1.27
GTF3C1-202ENST00000561623 TM2D3Q9BRN9 247 aa7.11□□□□□ -1.27
GTF3C1-202ENST00000561623 LYPD5Q6UWN5 251 aa7.1□□□□□ -1.27
GTF3C1-202ENST00000561623 LIMD2Q9BT23 127 aa7.1□□□□□ -1.27
GTF3C1-202ENST00000561623 LINC01561Q8N1V8 128 aa7.09□□□□□ -1.27
GTF3C1-202ENST00000561623 Q6ZQT0 140 aa7.09□□□□□ -1.27
GTF3C1-202ENST00000561623 TLN2Q9Y4G6 2542 aa7.09□□□□□ -1.28
GTF3C1-202ENST00000561623 C2orf48Q96LS8 159 aa7.09□□□□□ -1.28
GTF3C1-202ENST00000561623 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
GTF3C1-202ENST00000561623 C7orf65Q6ZTY9 151 aa7.08□□□□□ -1.28
GTF3C1-202ENST00000561623 MTORP42345 2549 aa7.08□□□□□ -1.28
GTF3C1-202ENST00000561623 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
GTF3C1-202ENST00000561623 LITAFQ99732 161 aa7.06□□□□□ -1.28
GTF3C1-202ENST00000561623 IGKV2D-30A0A075B6S6 120 aa7.06□□□□□ -1.28
GTF3C1-202ENST00000561623 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
GTF3C1-202ENST00000561623 PTPRBP23467 1997 aa7.05□□□□□ -1.28
GTF3C1-202ENST00000561623 BCE1O60756 84 aa7.05□□□□□ -1.28
GTF3C1-202ENST00000561623 C6orf48Q9UBA6 75 aa7.05□□□□□ -1.28
GTF3C1-202ENST00000561623 SSBP3-AS1Q7Z2R9 100 aa7.04□□□□□ -1.28
GTF3C1-202ENST00000561623 ACYP2P14621 99 aa7.03□□□□□ -1.28
GTF3C1-202ENST00000561623 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
GTF3C1-202ENST00000561623 ELOF1P60002 83 aaKnown RBP7.02□□□□□ -1.29
GTF3C1-202ENST00000561623 SPACA4Q8TDM5 124 aa7.02□□□□□ -1.29
GTF3C1-202ENST00000561623 A0A1B0GU69 56 aa7.02□□□□□ -1.29
GTF3C1-202ENST00000561623 F8WDY8 70 aa7.02□□□□□ -1.29
GTF3C1-202ENST00000561623 LINC00167Q96N53 147 aa7.01□□□□□ -1.29
GTF3C1-202ENST00000561623 SMR3BP02814 79 aaPredicted RBP7.01□□□□□ -1.29
GTF3C1-202ENST00000561623 RPL37AP61513 92 aaKnown RBP7□□□□□ -1.29
GTF3C1-202ENST00000561623 EIF4EBP3O60516 100 aaPredicted RBP6.99□□□□□ -1.29
GTF3C1-202ENST00000561623 UTRNP46939 3433 aa6.99□□□□□ -1.29
GTF3C1-202ENST00000561623 ST20-AS1Q8NBB2 130 aa6.99□□□□□ -1.29
GTF3C1-202ENST00000561623 C16orf95Q9H693 158 aa6.99□□□□□ -1.29
GTF3C1-202ENST00000561623 M0R2T5 61 aa6.97□□□□□ -1.29
GTF3C1-202ENST00000561623 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
GTF3C1-202ENST00000561623 CENPFP49454 3210 aa6.97□□□□□ -1.29
GTF3C1-202ENST00000561623 A8MUN3 132 aa6.97□□□□□ -1.29
GTF3C1-202ENST00000561623 SPTBN4Q9H254 2564 aa6.96□□□□□ -1.29
GTF3C1-202ENST00000561623 Q8NBF4 154 aa6.96□□□□□ -1.29
GTF3C1-202ENST00000561623 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
GTF3C1-202ENST00000561623 LINC00336Q6ZUF6 198 aa6.95□□□□□ -1.3
GTF3C1-202ENST00000561623 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
GTF3C1-202ENST00000561623 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
GTF3C1-202ENST00000561623 MOBPQ13875 183 aa6.94□□□□□ -1.3
GTF3C1-202ENST00000561623 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
GTF3C1-202ENST00000561623 Q6ZRX8 168 aa6.94□□□□□ -1.3
GTF3C1-202ENST00000561623 RTL8CO15255 209 aa6.93□□□□□ -1.3
GTF3C1-202ENST00000561623 TRAV22A0A0B4J277 110 aa6.93□□□□□ -1.3
GTF3C1-202ENST00000561623 K7EQZ3 153 aa6.92□□□□□ -1.3
GTF3C1-202ENST00000561623 APLNQ9ULZ1 77 aa6.92□□□□□ -1.3
GTF3C1-202ENST00000561623 FLNBO75369 2602 aaKnown RBP6.92□□□□□ -1.3
GTF3C1-202ENST00000561623 ACANP16112 2415 aa6.92□□□□□ -1.3
GTF3C1-202ENST00000561623 TRBV7-4A0A0J9YYF1 115 aa6.92□□□□□ -1.3
GTF3C1-202ENST00000561623 COL27A1Q8IZC6 1860 aaPredicted RBP6.91□□□□□ -1.3
GTF3C1-202ENST00000561623 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.3
GTF3C1-202ENST00000561623 C8orf87E5RJ46 101 aa6.9□□□□□ -1.3
GTF3C1-202ENST00000561623 H3BPC8 53 aa6.9□□□□□ -1.31
GTF3C1-202ENST00000561623 A0A1B0GW54 56 aa6.9□□□□□ -1.31
GTF3C1-202ENST00000561623 IGLV6-57P01721 117 aa6.89□□□□□ -1.31
GTF3C1-202ENST00000561623 PKD1L2Q7Z442 2459 aa6.89□□□□□ -1.31
GTF3C1-202ENST00000561623 COA5Q86WW8 74 aa6.89□□□□□ -1.31
GTF3C1-202ENST00000561623 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
GTF3C1-202ENST00000561623 Q6ZRP5 223 aa6.88□□□□□ -1.31
GTF3C1-202ENST00000561623 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
GTF3C1-202ENST00000561623 H7BZZ5 65 aa6.87□□□□□ -1.31
GTF3C1-202ENST00000561623 ERC2-IT1O76042 136 aa6.87□□□□□ -1.31
GTF3C1-202ENST00000561623 CHTF8P0CG12 524 aa6.87□□□□□ -1.31
GTF3C1-202ENST00000561623 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
GTF3C1-202ENST00000561623 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
GTF3C1-202ENST00000561623 SETD2Q9BYW2 2564 aaPredicted RBP6.86□□□□□ -1.31
GTF3C1-202ENST00000561623 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
GTF3C1-202ENST00000561623 A8MWP4 228 aa6.82□□□□□ -1.32
GTF3C1-202ENST00000561623 GVQW2A0A096LPI5 108 aaPredicted RBP6.82□□□□□ -1.32
GTF3C1-202ENST00000561623 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
GTF3C1-202ENST00000561623 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
GTF3C1-202ENST00000561623 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
GTF3C1-202ENST00000561623 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
GTF3C1-202ENST00000561623 LINC00313P59037 77 aa6.81□□□□□ -1.32
GTF3C1-202ENST00000561623 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
GTF3C1-202ENST00000561623 KLK9Q2XQG4 91 aa6.79□□□□□ -1.32
GTF3C1-202ENST00000561623 LINC01600Q96MT4 127 aa6.79□□□□□ -1.32
GTF3C1-202ENST00000561623 Q8NAQ8 132 aa6.79□□□□□ -1.32
GTF3C1-202ENST00000561623 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
GTF3C1-202ENST00000561623 COL4A2P08572 1712 aa6.79□□□□□ -1.32
GTF3C1-202ENST00000561623 PLA2G2DQ9UNK4 145 aa6.78□□□□□ -1.32
GTF3C1-202ENST00000561623 EPG5Q9HCE0 2579 aa6.78□□□□□ -1.32
GTF3C1-202ENST00000561623 ANKRD11Q6UB99 2663 aaPredicted RBP6.78□□□□□ -1.32
GTF3C1-202ENST00000561623 CD164Q04900 197 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms