RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 FAM168BA1KXE4 195 aa6.49□□□□□ -1.37
LRRC28-221ENST00000561276 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
LRRC28-221ENST00000561276 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
LRRC28-221ENST00000561276 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
LRRC28-221ENST00000561276 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
LRRC28-221ENST00000561276 SND1-IT1Q9HBX3 110 aa6.48□□□□□ -1.37
LRRC28-221ENST00000561276 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
LRRC28-221ENST00000561276 EPM2AB3EWF7 344 aa6.47□□□□□ -1.37
LRRC28-221ENST00000561276 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
LRRC28-221ENST00000561276 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
LRRC28-221ENST00000561276 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.37
LRRC28-221ENST00000561276 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
LRRC28-221ENST00000561276 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
LRRC28-221ENST00000561276 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
LRRC28-221ENST00000561276 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
LRRC28-221ENST00000561276 ADAMTSL4-AS1Q5T5F5 129 aa6.45□□□□□ -1.38
LRRC28-221ENST00000561276 DAND5Q8N907 189 aa6.45□□□□□ -1.38
LRRC28-221ENST00000561276 PLA2G2DQ9UNK4 145 aa6.45□□□□□ -1.38
LRRC28-221ENST00000561276 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
LRRC28-221ENST00000561276 SCGB1D4Q6XE38 83 aa6.44□□□□□ -1.38
LRRC28-221ENST00000561276 Q8N1X5 172 aa6.44□□□□□ -1.38
LRRC28-221ENST00000561276 VAMP8Q9BV40 100 aa6.44□□□□□ -1.38
LRRC28-221ENST00000561276 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
LRRC28-221ENST00000561276 PHF5AQ7RTV0 110 aaKnown RBP6.43□□□□□ -1.38
LRRC28-221ENST00000561276 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
LRRC28-221ENST00000561276 LITAFQ99732 161 aa6.43□□□□□ -1.38
LRRC28-221ENST00000561276 PAM16Q9Y3D7 125 aa6.43□□□□□ -1.38
LRRC28-221ENST00000561276 C22orf24Q9Y442 160 aa6.43□□□□□ -1.38
LRRC28-221ENST00000561276 LRP1BQ9NZR2 4599 aa6.43□□□□□ -1.38
LRRC28-221ENST00000561276 LOC107984156A0A0G2JMH3 177 aa6.42□□□□□ -1.38
LRRC28-221ENST00000561276 M0QXV9 152 aa6.42□□□□□ -1.38
LRRC28-221ENST00000561276 TIMM17BO60830 172 aa6.42□□□□□ -1.38
LRRC28-221ENST00000561276 SPATA45Q537H7 98 aa6.42□□□□□ -1.38
LRRC28-221ENST00000561276 ARL17AQ8IVW1 177 aa6.42□□□□□ -1.38
LRRC28-221ENST00000561276 H3BS24 57 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 COX8AP10176 69 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 VPREB1P12018 145 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 NPC2P61916 151 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 RPL24P83731 157 aaKnown RBP6.41□□□□□ -1.38
LRRC28-221ENST00000561276 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 NKAPP1Q8N9T2 125 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 Q8NDZ9 215 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 C14orf144Q96I85 54 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 TP73-AS1Q9UF72 201 aa6.41□□□□□ -1.38
LRRC28-221ENST00000561276 IGLV5-37A0A075B6J1 123 aa6.4□□□□□ -1.38
LRRC28-221ENST00000561276 LOC105371267A0A1B0GV96 52 aa6.4□□□□□ -1.38
LRRC28-221ENST00000561276 PRR3P79522 188 aaKnown RBP6.4□□□□□ -1.38
LRRC28-221ENST00000561276 Q5VSD8 79 aa6.4□□□□□ -1.38
LRRC28-221ENST00000561276 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
LRRC28-221ENST00000561276 LINC00167Q96N53 147 aa6.4□□□□□ -1.38
LRRC28-221ENST00000561276 MIEN1Q9BRT3 115 aa6.4□□□□□ -1.38
LRRC28-221ENST00000561276 KIAA1109Q2LD37 5005 aa6.39□□□□□ -1.39
LRRC28-221ENST00000561276 DNAH8Q96JB1 4490 aa6.39□□□□□ -1.39
LRRC28-221ENST00000561276 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
LRRC28-221ENST00000561276 DLEU1O43261 78 aa6.39□□□□□ -1.39
LRRC28-221ENST00000561276 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
LRRC28-221ENST00000561276 LBHQ53QV2 105 aaPredicted RBP6.39□□□□□ -1.39
LRRC28-221ENST00000561276 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
LRRC28-221ENST00000561276 LINC00308Q8TCZ7 52 aa6.39□□□□□ -1.39
LRRC28-221ENST00000561276 APOBP04114 4563 aaKnown RBP6.39□□□□□ -1.39
LRRC28-221ENST00000561276 GAGE10A6NGK3 116 aa6.38□□□□□ -1.39
LRRC28-221ENST00000561276 RPL37AP8A6NKH3 93 aa6.38□□□□□ -1.39
LRRC28-221ENST00000561276 RPL37AP61513 92 aaKnown RBP6.38□□□□□ -1.39
LRRC28-221ENST00000561276 UBE2BP63146 152 aa6.38□□□□□ -1.39
LRRC28-221ENST00000561276 SRSF9Q13242 221 aaKnown RBP eCLIP6.38□□□□□ -1.39
LRRC28-221ENST00000561276 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
LRRC28-221ENST00000561276 SPANXDQ9BXN6 97 aa6.38□□□□□ -1.39
LRRC28-221ENST00000561276 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
LRRC28-221ENST00000561276 SPANXCQ9NY87 97 aa6.38□□□□□ -1.39
LRRC28-221ENST00000561276 M0R378 163 aa6.37□□□□□ -1.39
LRRC28-221ENST00000561276 S100A12P80511 92 aa6.37□□□□□ -1.39
LRRC28-221ENST00000561276 SLC25A34Q6PIV7 304 aa6.37□□□□□ -1.39
LRRC28-221ENST00000561276 Q6ZVH6 145 aa6.37□□□□□ -1.39
LRRC28-221ENST00000561276 PSORS1C2Q9UIG4 136 aa6.37□□□□□ -1.39
LRRC28-221ENST00000561276 BIRC6Q9NR09 4857 aa6.36□□□□□ -1.39
LRRC28-221ENST00000561276 IGLV1-50A0A075B6I6 118 aa6.36□□□□□ -1.39
LRRC28-221ENST00000561276 NCR3O14931 201 aa6.36□□□□□ -1.39
LRRC28-221ENST00000561276 NDUFC2O95298 119 aa6.36□□□□□ -1.39
LRRC28-221ENST00000561276 IFITM1P13164 125 aa6.36□□□□□ -1.39
LRRC28-221ENST00000561276 KRTAP10-4P60372 401 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-221ENST00000561276 MUSTN1Q8IVN3 82 aa6.36□□□□□ -1.39
LRRC28-221ENST00000561276 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
LRRC28-221ENST00000561276 IGKV2-28A0A075B6P5 120 aa6.35□□□□□ -1.39
LRRC28-221ENST00000561276 IGKV2D-28P01615 120 aa6.35□□□□□ -1.39
LRRC28-221ENST00000561276 COPS9Q8WXC6 57 aa6.35□□□□□ -1.39
LRRC28-221ENST00000561276 HSPG2P98160 4391 aa6.34□□□□□ -1.39
LRRC28-221ENST00000561276 TRBV10-2A0A0K0K1G8 114 aa6.34□□□□□ -1.39
LRRC28-221ENST00000561276 C1orf137Q5JT78 98 aa6.34□□□□□ -1.39
LRRC28-221ENST00000561276 HIGD1BQ9P298 99 aa6.34□□□□□ -1.39
LRRC28-221ENST00000561276 SMIM6P0DI80 62 aa6.33□□□□□ -1.4
LRRC28-221ENST00000561276 HIST1H4GQ99525 98 aa6.33□□□□□ -1.4
LRRC28-221ENST00000561276 PPDPFQ9H3Y8 114 aa6.33□□□□□ -1.4
LRRC28-221ENST00000561276 S100A7L2Q5SY68 101 aa6.32□□□□□ -1.4
LRRC28-221ENST00000561276 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
LRRC28-221ENST00000561276 LINC00518Q8N0U6 118 aa6.32□□□□□ -1.4
LRRC28-221ENST00000561276 TRBV10-3A0A0K0K1G6 114 aa6.31□□□□□ -1.4
LRRC28-221ENST00000561276 IGLV7-43P04211 117 aa6.31□□□□□ -1.4
LRRC28-221ENST00000561276 DDTP30046 118 aa6.31□□□□□ -1.4
LRRC28-221ENST00000561276 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
LRRC28-221ENST00000561276 RYR1P21817 5038 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms