RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BHQ93079 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BNQ99877 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BMQ99879 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 TRAV12-1A0A0B4J245 112 aa7.34□□□□□ -1.23
RABGGTA-213ENST00000560127 F8VRH5 84 aa7.34□□□□□ -1.23
RABGGTA-213ENST00000560127 BCE1O60756 84 aa7.34□□□□□ -1.23
RABGGTA-213ENST00000560127 ASB16-AS1Q495Z4 193 aa7.34□□□□□ -1.23
RABGGTA-213ENST00000560127 C6orf226Q5I0X4 101 aa7.34□□□□□ -1.23
RABGGTA-213ENST00000560127 PRSS2P07478 247 aa7.33□□□□□ -1.24
RABGGTA-213ENST00000560127 CHTOPQ9Y3Y2 248 aaKnown RBP7.33□□□□□ -1.24
RABGGTA-213ENST00000560127 CKS1BP61024 79 aa7.32□□□□□ -1.24
RABGGTA-213ENST00000560127 FAM229BQ4G0N7 80 aa7.32□□□□□ -1.24
RABGGTA-213ENST00000560127 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
RABGGTA-213ENST00000560127 CXCL5P42830 114 aa7.31□□□□□ -1.24
RABGGTA-213ENST00000560127 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
RABGGTA-213ENST00000560127 H3BRM9 83 aa7.3□□□□□ -1.24
RABGGTA-213ENST00000560127 ATP6V1G1O75348 118 aa7.3□□□□□ -1.24
RABGGTA-213ENST00000560127 CTAG1AP78358 180 aa7.3□□□□□ -1.24
RABGGTA-213ENST00000560127 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
RABGGTA-213ENST00000560127 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
RABGGTA-213ENST00000560127 LEPROTL1O95214 131 aa7.29□□□□□ -1.24
RABGGTA-213ENST00000560127 FABP4P15090 132 aa7.29□□□□□ -1.24
RABGGTA-213ENST00000560127 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
RABGGTA-213ENST00000560127 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
RABGGTA-213ENST00000560127 MRPL55Q7Z7F7 128 aaKnown RBP7.29□□□□□ -1.24
RABGGTA-213ENST00000560127 KRTAP13-1Q8IUC0 172 aa7.29□□□□□ -1.24
RABGGTA-213ENST00000560127 TP73-AS1Q9UF72 201 aa7.29□□□□□ -1.24
RABGGTA-213ENST00000560127 H0Y8G0 127 aa7.28□□□□□ -1.24
RABGGTA-213ENST00000560127 TSPEAR-AS2P59090 65 aa7.28□□□□□ -1.24
RABGGTA-213ENST00000560127 Q8NDZ9 215 aa7.28□□□□□ -1.24
RABGGTA-213ENST00000560127 PMCHL2Q9BQD1 86 aa7.28□□□□□ -1.24
RABGGTA-213ENST00000560127 KRTAP13-3Q3SY46 172 aa7.27□□□□□ -1.25
RABGGTA-213ENST00000560127 COA6Q5JTJ3 125 aaKnown RBP7.27□□□□□ -1.25
RABGGTA-213ENST00000560127 LINC00337Q8N6G1 96 aa7.27□□□□□ -1.25
RABGGTA-213ENST00000560127 IGKV2D-26A0A0A0MRZ7 120 aa7.26□□□□□ -1.25
RABGGTA-213ENST00000560127 RPL37AP8A6NKH3 93 aa7.26□□□□□ -1.25
RABGGTA-213ENST00000560127 LINC00167Q96N53 147 aa7.26□□□□□ -1.25
RABGGTA-213ENST00000560127 FP248Q71RG6 208 aaPredicted RBP7.25□□□□□ -1.25
RABGGTA-213ENST00000560127 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
RABGGTA-213ENST00000560127 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
RABGGTA-213ENST00000560127 ERG28Q9UKR5 140 aa7.24□□□□□ -1.25
RABGGTA-213ENST00000560127 PFN2P35080 140 aa7.23□□□□□ -1.25
RABGGTA-213ENST00000560127 UBE2AP49459 152 aa7.23□□□□□ -1.25
RABGGTA-213ENST00000560127 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
RABGGTA-213ENST00000560127 GAGE10A6NGK3 116 aa7.22□□□□□ -1.25
RABGGTA-213ENST00000560127 S100A1P23297 94 aa7.22□□□□□ -1.25
RABGGTA-213ENST00000560127 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
RABGGTA-213ENST00000560127 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
RABGGTA-213ENST00000560127 SYS1-DBNDD2H3BUS1 97 aa7.21□□□□□ -1.26
RABGGTA-213ENST00000560127 DPM2O94777 84 aa7.21□□□□□ -1.26
RABGGTA-213ENST00000560127 VPREB1P12018 145 aa7.21□□□□□ -1.26
RABGGTA-213ENST00000560127 PLNP26678 52 aa7.21□□□□□ -1.26
RABGGTA-213ENST00000560127 MT1HP80294 61 aa7.21□□□□□ -1.26
RABGGTA-213ENST00000560127 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.26
RABGGTA-213ENST00000560127 IGKCP01834 107 aa7.2□□□□□ -1.26
RABGGTA-213ENST00000560127 LINC01545Q5VT33 79 aa7.2□□□□□ -1.26
RABGGTA-213ENST00000560127 KRTAP9-7A8MTY7 169 aa7.19□□□□□ -1.26
RABGGTA-213ENST00000560127 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
RABGGTA-213ENST00000560127 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
RABGGTA-213ENST00000560127 MAP1LC3CQ9BXW4 147 aa7.19□□□□□ -1.26
RABGGTA-213ENST00000560127 A0A0U1RRA0 63 aa7.18□□□□□ -1.26
RABGGTA-213ENST00000560127 LEPROTO15243 131 aa7.18□□□□□ -1.26
RABGGTA-213ENST00000560127 CFC1BP0CG36 223 aa7.18□□□□□ -1.26
RABGGTA-213ENST00000560127 SMIM13P0DJ93 91 aa7.18□□□□□ -1.26
RABGGTA-213ENST00000560127 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
RABGGTA-213ENST00000560127 COX17Q14061 63 aa7.18□□□□□ -1.26
RABGGTA-213ENST00000560127 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
RABGGTA-213ENST00000560127 PRLHP81277 87 aa7.17□□□□□ -1.26
RABGGTA-213ENST00000560127 SFTA2Q6UW10 78 aa7.17□□□□□ -1.26
RABGGTA-213ENST00000560127 J3QQQ9 107 aa7.16□□□□□ -1.26
RABGGTA-213ENST00000560127 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.15□□□□□ -1.26
RABGGTA-213ENST00000560127 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.26
RABGGTA-213ENST00000560127 PET117Q6UWS5 81 aa7.15□□□□□ -1.26
RABGGTA-213ENST00000560127 HIST3H2BBQ8N257 126 aa7.15□□□□□ -1.26
RABGGTA-213ENST00000560127 MIR7-3HGQ8N6C7 128 aa7.15□□□□□ -1.26
RABGGTA-213ENST00000560127 PLEKHB2Q96CS7 222 aa7.15□□□□□ -1.26
RABGGTA-213ENST00000560127 FLGP20930 4061 aaPredicted RBP7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 IGKV2-28A0A075B6P5 120 aa7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 E9PLD3 99 aa7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 IGKV2D-28P01615 120 aa7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 LINC00158P58513 81 aa7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 HERV-K104P63124 156 aa7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 DAND5Q8N907 189 aa7.14□□□□□ -1.27
RABGGTA-213ENST00000560127 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
RABGGTA-213ENST00000560127 KRTDAPP60985 99 aa7.13□□□□□ -1.27
RABGGTA-213ENST00000560127 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
RABGGTA-213ENST00000560127 NKAPP1Q8N9T2 125 aa7.13□□□□□ -1.27
RABGGTA-213ENST00000560127 TTTY13Q9BZ97 58 aa7.13□□□□□ -1.27
RABGGTA-213ENST00000560127 HERVK_113P61574 105 aa7.12□□□□□ -1.27
RABGGTA-213ENST00000560127 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
RABGGTA-213ENST00000560127 MEIG1Q5JSS6 88 aa7.12□□□□□ -1.27
RABGGTA-213ENST00000560127 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
RABGGTA-213ENST00000560127 XP32Q5T750 250 aa7.12□□□□□ -1.27
RABGGTA-213ENST00000560127 SOSTDC1Q6X4U4 206 aa7.12□□□□□ -1.27
RABGGTA-213ENST00000560127 LITAFQ99732 161 aa7.12□□□□□ -1.27
RABGGTA-213ENST00000560127 HIST1H2BLQ99880 126 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms